Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g024950 Chlamydomonas reinhardtii HOM05D000961 ORTHO05D000841 0.0e+00 1564.7 829 100.0
DCAR_029682 Daucus carota HOM05D000961 ORTHO05D000841 8.2e-19 100.1 513 22.2
Thecc.04G180300 Theobroma cacao HOM05D000961 ORTHO05D000841 1.1e-18 99.8 455 24.6
PSO732G0770 Papaver somniferum HOM05D000961 ORTHO05D000841 2.9e-16 91.7 499 24.6
DCAR_020486 Daucus carota HOM05D000961 ORTHO05D000841 1.5e-15 89.4 453 26.3
ATR0743G173 Amborella trichopoda HOM05D000961 ORTHO05D000841 4.2e-15 87.8 510 22.4
CANSAT80G0959 Cannabis sativa HOM05D000961 ORTHO05D000841 4.2e-15 87.8 485 24.1
PSO675G1974 Papaver somniferum HOM05D000961 ORTHO05D000841 4.2e-15 87.8 499 23.8
Oeu048997.1 Olea europaea HOM05D000961 ORTHO05D000841 9.4e-15 86.7 477 23.5
Ca_01261_v3 Cicer arietinum L. HOM05D000961 ORTHO05D000841 2.1e-14 85.5 471 22.9
Manes.04G042800 Manihot esculenta HOM05D000961 ORTHO05D000841 2.1e-14 85.5 506 22.7
TWI38G1188 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 2.1e-14 85.5 477 23.3
MSTRG.10819 Avicennia marina HOM05D000961 ORTHO05D000841 4.7e-14 84.3 506 23.5
Dinv43427 Davidia involucrata HOM05D000961 ORTHO05D000841 4.7e-14 84.3 476 22.7
ATR0332G113 Amborella trichopoda HOM05D000961 ORTHO05D000841 6.1e-14 84.0 518 23.7
CSS0037898 Camellia sinensis var. sinensis HOM05D000961 ORTHO05D000841 6.1e-14 84.0 484 22.9
MSTRG.6433 Avicennia marina HOM05D000961 ORTHO05D000841 8.0e-14 83.6 471 25.1
TPR.G34205 Trifolium pratense HOM05D000961 ORTHO05D000841 1.0e-13 83.2 512 23.8
Sopen01g034380 Solanum pennellii HOM05D000961 ORTHO05D000841 1.4e-13 82.8 523 22.9
Aqoxy2G00162 Aquilegia oxysepala HOM05D000961 ORTHO05D000841 1.8e-13 82.4 515 22.5
Peaxi162Scf00953g00514 Petunia axillaris HOM05D000961 ORTHO05D000841 1.8e-13 82.4 481 22.7
THA.LOC104801976 Tarenaya hassleriana HOM05D000961 ORTHO05D000841 1.8e-13 82.4 508 23.4
CAN.G219.39 Capsicum annuum HOM05D000961 ORTHO05D000841 2.3e-13 82.0 443 22.8
MD12G1077200 Malus domestica HOM05D000961 ORTHO05D000841 2.3e-13 82.0 512 22.7
AUR62002297 Chenopodium quinoa HOM05D000961 ORTHO05D000841 5.2e-13 80.9 526 22.4
Gohir.A01G196900 Gossypium hirsutum HOM05D000961 ORTHO05D000841 5.2e-13 80.9 467 23.1
Gohir.D01G187100 Gossypium hirsutum HOM05D000961 ORTHO05D000841 6.7e-13 80.5 467 22.7
Lalb_Chr20g0110701 Lupinus albus HOM05D000961 ORTHO05D000841 6.7e-13 80.5 519 22.7
Gorai.002G230500 Gossypium raimondii HOM05D000961 ORTHO05D000841 8.8e-13 80.1 467 22.7
Lj3g0009321 Lotus japonicus HOM05D000961 ORTHO05D000841 8.8e-13 80.1 488 23.4
PSO384G1411 Papaver somniferum HOM05D000961 ORTHO05D000841 8.8e-13 80.1 475 22.7
TAR623G1550 Trochodendron aralioides HOM05D000961 ORTHO05D000841 1.2e-12 79.7 516 23.4
vmacro00626 Vaccinium macrocarpon HOM05D000961 ORTHO05D000841 1.2e-12 79.7 371 26.1
Cfa016828 Carpinus fangiana HOM05D000961 ORTHO05D000841 1.5e-12 79.3 481 23.1
Glyma.12G008200 Glycine max HOM05D000961 ORTHO05D000841 1.5e-12 79.3 551 23.2
RcHm_v2.0_Chr1g0317001 Rosa chinensis HOM05D000961 ORTHO05D000841 1.5e-12 79.3 499 22.6
Nn2g15283 Nelumbo nucifera HOM05D000961 ORTHO05D000841 2.0e-12 79.0 501 22.2
BolC2t07093H Brassica oleracea HOM05D000961 ORTHO05D000841 2.6e-12 78.6 462 23.4
TWI77G0571 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 3.3e-12 78.2 516 23.4
HPP92_010413 Vanilla planifolia HOM05D000961 ORTHO05D000841 3.3e-12 78.2 307 25.1
Actinidia31072 Actinidia chinensis HOM05D000961 ORTHO05D000841 4.4e-12 77.8 480 23.3
CARHR136910 Cardamine hirsuta HOM05D000961 ORTHO05D000841 4.4e-12 77.8 495 24.6
BcaB05g22782 Brassica carinata HOM05D000961 ORTHO05D000841 5.7e-12 77.4 510 23.1
Duzib138G1203 Durio zibethinus HOM05D000961 ORTHO05D000841 5.7e-12 77.4 483 23.2
Ciclev10006843m.g Citrus clementina HOM05D000961 ORTHO05D000841 7.5e-12 77.0 469 22.6
Thecc.01G409000 Theobroma cacao HOM05D000961 ORTHO05D000841 7.5e-12 77.0 467 25.1
C02p10600 Brassica napus HOM05D000961 ORTHO05D000841 9.7e-12 76.6 462 23.2
BraA02t05612Z Brassica rapa HOM05D000961 ORTHO05D000841 9.7e-12 76.6 462 23.2
Dinv18057 Davidia involucrata HOM05D000961 ORTHO05D000841 9.7e-12 76.6 488 22.7
MD14G1070800 Malus domestica HOM05D000961 ORTHO05D000841 9.7e-12 76.6 531 21.8
PSO339G0759 Papaver somniferum HOM05D000961 ORTHO05D000841 1.3e-11 76.3 487 22.8
Migut.K00084 Erythranthe guttata HOM05D000961 ORTHO05D000841 1.7e-11 75.9 532 22.4
FvH4_7g01250 Fragaria vesca HOM05D000961 ORTHO05D000841 1.7e-11 75.9 469 21.7
Glyma.10G146900 Glycine max HOM05D000961 ORTHO05D000841 1.7e-11 75.9 235 29.8
Medtr4g039320 Medicago truncatula HOM05D000961 ORTHO05D000841 1.7e-11 75.9 384 24.2
TWI53G1548 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 1.7e-11 75.9 517 22.1
FAN03G2397 Fragaria x ananassa HOM05D000961 ORTHO05D000841 2.2e-11 75.5 470 22.3
Nn4g25586 Nelumbo nucifera HOM05D000961 ORTHO05D000841 2.2e-11 75.5 524 23.1
Os02g0143200 Oryza sativa ssp. japonica HOM05D000961 ORTHO05D000841 2.2e-11 75.5 508 23.8
QL04p008116 Quercus lobata HOM05D000961 ORTHO05D000841 2.8e-11 75.1 544 23.2
QL04p008531 Quercus lobata HOM05D000961 ORTHO05D000841 2.8e-11 75.1 544 23.2
THA.LOC104826204 Tarenaya hassleriana HOM05D000961 ORTHO05D000841 2.8e-11 75.1 497 22.1
VMungo0720G1251 Vigna mungo HOM05D000961 ORTHO05D000841 2.8e-11 75.1 223 30.5
Duzib093G0288 Durio zibethinus HOM05D000961 ORTHO05D000841 3.7e-11 74.7 512 22.7
FAN06G4592 Fragaria x ananassa HOM05D000961 ORTHO05D000841 3.7e-11 74.7 471 22.1
Psat7g176920 Pisum sativum HOM05D000961 ORTHO05D000841 3.7e-11 74.7 492 23.0
Psat6g119880 Pisum sativum HOM05D000961 ORTHO05D000841 4.8e-11 74.3 493 23.1
Duzib268G0971 Durio zibethinus HOM05D000961 ORTHO05D000841 6.3e-11 73.9 510 22.5
Nitab4.5_0008353g0040 Nicotiana tabacum HOM05D000961 ORTHO05D000841 6.3e-11 73.9 454 22.5
Potri.006G052100 Populus trichocarpa HOM05D000961 ORTHO05D000841 6.3e-11 73.9 518 22.4
Sabra06G0036600 Salix brachista HOM05D000961 ORTHO05D000841 6.3e-11 73.9 474 22.8
EL10Ac3g07077 Beta vulgaris HOM05D000961 ORTHO05D000841 8.2e-11 73.6 465 24.3
ECA247G0369 Erigeron canadensis HOM05D000961 ORTHO05D000841 8.2e-11 73.6 463 22.5
arahy.Tifrunner.gnm1.ann1.FB3Z2N Arachis hypogaea HOM05D000961 ORTHO05D000841 1.4e-10 72.8 519 22.7
Aa31LG1G23840 Aethionema arabicum HOM05D000961 ORTHO05D000841 2.4e-10 72.0 619 21.8
Duzib133G0718 Durio zibethinus HOM05D000961 ORTHO05D000841 2.4e-10 72.0 525 24.0
Sp4g24090 Schrenkiella parvula HOM05D000961 ORTHO05D000841 2.4e-10 72.0 493 22.3
SalBow6G0035 Salvia bowleyana HOM05D000961 ORTHO05D000841 3.1e-10 71.6 490 23.5
HPP92_005412 Vanilla planifolia HOM05D000961 ORTHO05D000841 3.1e-10 71.6 219 28.8
FAN10G1384 Fragaria x ananassa HOM05D000961 ORTHO05D000841 4.1e-10 71.2 471 24.0
PGR004G1646 Punica granatum HOM05D000961 ORTHO05D000841 4.1e-10 71.2 519 22.2
CiPaw.10G032800 Carya illinoinensis HOM05D000961 ORTHO05D000841 5.3e-10 70.9 551 22.1
A04p31800 Brassica napus HOM05D000961 ORTHO05D000841 7.0e-10 70.5 476 21.6
BraA04t18638Z Brassica rapa HOM05D000961 ORTHO05D000841 7.0e-10 70.5 476 21.6
Carub.0004s2410 Capsella rubella HOM05D000961 ORTHO05D000841 9.1e-10 70.1 543 23.2
Nn7g36249 Nelumbo nucifera HOM05D000961 ORTHO05D000841 9.1e-10 70.1 519 22.7
Phvul.007G201500 Phaseolus vulgaris HOM05D000961 ORTHO05D000841 9.1e-10 70.1 223 29.6
Migut.B01289 Erythranthe guttata HOM05D000961 ORTHO05D000841 1.2e-09 69.7 519 22.5
Glyma.09G228300 Glycine max HOM05D000961 ORTHO05D000841 1.6e-09 69.3 548 22.3
Os02g0780500 Oryza sativa ssp. japonica HOM05D000961 ORTHO05D000841 1.6e-09 69.3 468 20.1
arahy.Tifrunner.gnm1.ann1.BWWN3T Arachis hypogaea HOM05D000961 ORTHO05D000841 2.0e-09 68.9 281 23.8
Gohir.A12G093900 Gossypium hirsutum HOM05D000961 ORTHO05D000841 2.0e-09 68.9 511 22.3
Gohir.D12G096900 Gossypium hirsutum HOM05D000961 ORTHO05D000841 2.0e-09 68.9 511 22.3
CiPaw.09G037400 Carya illinoinensis HOM05D000961 ORTHO05D000841 2.7e-09 68.6 551 21.4
Thhalv10016171m.g Eutrema salsugineum HOM05D000961 ORTHO05D000841 3.5e-09 68.2 544 23.2
Gorai.008G105100 Gossypium raimondii HOM05D000961 ORTHO05D000841 3.5e-09 68.2 511 22.1
Medtr7g091780 Medicago truncatula HOM05D000961 ORTHO05D000841 3.5e-09 68.2 483 22.6
HPP92_013534 Vanilla planifolia HOM05D000961 ORTHO05D000841 3.5e-09 68.2 470 23.0
Cpa.g.sc92.41 Carica papaya HOM05D000961 ORTHO05D000841 4.5e-09 67.8 534 23.0
BolC4t28420H Brassica oleracea HOM05D000961 ORTHO05D000841 5.9e-09 67.4 549 21.5
COL.COLO4_05549 Corchorus olitorius HOM05D000961 ORTHO05D000841 1.3e-08 66.2 218 28.9
Phvul.011G013000 Phaseolus vulgaris HOM05D000961 ORTHO05D000841 1.3e-08 66.2 551 21.8
BcaB04g19709 Brassica carinata HOM05D000961 ORTHO05D000841 1.7e-08 65.9 233 27.0
BcaC04g23672 Brassica carinata HOM05D000961 ORTHO05D000841 1.7e-08 65.9 233 27.0
TWI73G0141 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 1.7e-08 65.9 286 27.3
VMungo1127G2021 Vigna mungo HOM05D000961 ORTHO05D000841 1.7e-08 65.9 446 21.7
AL4G40150 Arabidopsis lyrata HOM05D000961 ORTHO05D000841 2.2e-08 65.5 543 21.7
TPR.G3688 Trifolium pratense HOM05D000961 ORTHO05D000841 2.2e-08 65.5 472 22.5
Sc16g0009060 Simmondsia chinensis HOM05D000961 ORTHO05D000841 3.8e-08 64.7 466 22.7
AT2G41830 Arabidopsis thaliana HOM05D000961 ORTHO05D000841 5.0e-08 64.3 543 21.7
A05p02570 Brassica napus HOM05D000961 ORTHO05D000841 5.0e-08 64.3 464 21.3
Aqoxy5G03622 Aquilegia oxysepala HOM05D000961 ORTHO05D000841 6.5e-08 63.9 196 30.1
AUR62026028 Chenopodium quinoa HOM05D000961 ORTHO05D000841 6.5e-08 63.9 472 22.0
Cc02_g35060 Coffea canephora HOM05D000961 ORTHO05D000841 6.5e-08 63.9 220 29.5
Nn3g21707 Nelumbo nucifera HOM05D000961 ORTHO05D000841 6.5e-08 63.9 223 29.1
Os07g0205900 Oryza sativa ssp. japonica HOM05D000961 ORTHO05D000841 6.5e-08 63.9 205 28.8
Atru.chr1.1077 Acer truncatum HOM05D000961 ORTHO05D000841 8.5e-08 63.5 494 22.5
C04p69210 Brassica napus HOM05D000961 ORTHO05D000841 1.1e-07 63.2 549 21.3
SalBow3G2732 Salvia bowleyana HOM05D000961 ORTHO05D000841 1.5e-07 62.8 220 30.5
BcaB06g29205 Brassica carinata HOM05D000961 ORTHO05D000841 1.9e-07 62.4 553 21.2
Mapoly0063s0062 Marchantia polymorpha HOM05D000961 ORTHO05D000841 1.9e-07 62.4 223 28.7
Os01g0898300 Oryza sativa ssp. japonica HOM05D000961 ORTHO05D000841 2.5e-07 62.0 316 22.5
Atru.chr2.200 Acer truncatum HOM05D000961 ORTHO05D000841 4.2e-07 61.2 225 28.4
EL10Ac3g05927 Beta vulgaris HOM05D000961 ORTHO05D000841 5.5e-07 60.8 238 28.2
PSO210G6526 Papaver somniferum HOM05D000961 ORTHO05D000841 7.2e-07 60.5 221 28.5
Atru.chr11.2603 Acer truncatum HOM05D000961 ORTHO05D000841 9.4e-07 60.1 524 22.5
Sc13g0001800 Simmondsia chinensis HOM05D000961 ORTHO05D000841 1.2e-06 59.7 659 20.3
C07p41370 Brassica napus HOM05D000961 ORTHO05D000841 1.6e-06 59.3 230 27.0
Lalb_Chr25g0287331 Lupinus albus HOM05D000961 ORTHO05D000841 2.1e-06 58.9 473 22.2
TPR.G3714 Trifolium pratense HOM05D000961 ORTHO05D000841 3.6e-06 58.2 514 21.8
PSO339G5066 Papaver somniferum HOM05D000961 ORTHO05D000841 8.0e-06 57.0 297 20.5


User provided reference genes

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