Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g021200 Chlamydomonas reinhardtii HOM05D005374 ORTHO05D006534 1.5e-205 719.5 447 100.0
Mapoly0004s0051 Marchantia polymorpha HOM05D005374 ORTHO05D006534 5.8e-11 73.2 372 21.5
Glyma.11G090700 Glycine max HOM05D005374 ORTHO05D006534 7.6e-11 72.8 371 21.6
unitig_747.g21918 Utricularia gibba HOM05D005374 ORTHO05D006534 9.9e-11 72.4 381 22.0
SEGI_04185 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 4.9e-10 70.1 425 21.6
Gohir.A12G201800 Gossypium hirsutum HOM05D005374 ORTHO05D006534 6.4e-10 69.7 378 22.0
VMungo1215G0733 Vigna mungo HOM05D005374 ORTHO05D006534 6.4e-10 69.7 371 20.8
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 1.4e-09 68.6 371 20.8
HanXRQChr17g0558081 Helianthus annuus HOM05D005374 ORTHO05D006534 1.4e-09 68.6 370 21.4
Gorai.008G219400 Gossypium raimondii HOM05D005374 ORTHO05D006534 1.9e-09 68.2 378 21.7
Lalb_Chr16g0380381 Lupinus albus HOM05D005374 ORTHO05D006534 1.9e-09 68.2 371 21.0
Nn1g09345 Nelumbo nucifera HOM05D005374 ORTHO05D006534 1.9e-09 68.2 376 21.5
GSVIVG01036874001 Vitis vinifera HOM05D005374 ORTHO05D006534 1.9e-09 68.2 409 20.8
Gohir.D12G204500 Gossypium hirsutum HOM05D005374 ORTHO05D006534 2.4e-09 67.8 378 21.7
MSTRG.11863 Avicennia marina HOM05D005374 ORTHO05D006534 3.2e-09 67.4 377 21.8
Lj2g0008244 Lotus japonicus HOM05D005374 ORTHO05D006534 3.2e-09 67.4 376 20.7
Oeu015544.1 Olea europaea HOM05D005374 ORTHO05D006534 3.2e-09 67.4 377 22.3
Oeu046780.1 Olea europaea HOM05D005374 ORTHO05D006534 3.2e-09 67.4 377 22.3
Psat2g145440 Pisum sativum HOM05D005374 ORTHO05D006534 4.2e-09 67.0 376 21.3
COL.COLO4_16753 Corchorus olitorius HOM05D005374 ORTHO05D006534 5.4e-09 66.6 375 21.3
Migut.A00528 Erythranthe guttata HOM05D005374 ORTHO05D006534 9.3e-09 65.9 371 21.0
Glyma.01G154100 Glycine max HOM05D005374 ORTHO05D006534 9.3e-09 65.9 448 20.1
PSO541G3556 Papaver somniferum HOM05D005374 ORTHO05D006534 9.3e-09 65.9 332 22.9
Lsat_1_v5_gn_6_17221 Lactuca sativa HOM05D005374 ORTHO05D006534 1.2e-08 65.5 371 20.2
Phvul.002G121600 Phaseolus vulgaris HOM05D005374 ORTHO05D006534 1.2e-08 65.5 372 20.7
CAN.G884.8 Capsicum annuum HOM05D005374 ORTHO05D006534 1.6e-08 65.1 374 20.1
Nn7g37386 Nelumbo nucifera HOM05D005374 ORTHO05D006534 2.1e-08 64.7 376 21.3
TAR629G3354 Trochodendron aralioides HOM05D005374 ORTHO05D006534 2.7e-08 64.3 398 20.6
MD15G1000900 Malus domestica HOM05D005374 ORTHO05D006534 4.6e-08 63.5 371 21.0
Thecc.03G319500 Theobroma cacao HOM05D005374 ORTHO05D006534 4.6e-08 63.5 372 20.2
TWI18G0367 Tripterygium wilfordii HOM05D005374 ORTHO05D006534 4.6e-08 63.5 374 21.1
THA.LOC104811099 Tarenaya hassleriana HOM05D005374 ORTHO05D006534 6.0e-08 63.2 191 26.7
Aa31LG9G7650 Aethionema arabicum HOM05D005374 ORTHO05D006534 7.9e-08 62.8 111 35.1
Cfa012294 Carpinus fangiana HOM05D005374 ORTHO05D006534 7.9e-08 62.8 376 20.7
Cc08_g05810 Coffea canephora HOM05D005374 ORTHO05D006534 7.9e-08 62.8 380 21.6
Duzib205G0577 Durio zibethinus HOM05D005374 ORTHO05D006534 7.9e-08 62.8 372 20.2
Nitab4.5_0000030g0530 Nicotiana tabacum HOM05D005374 ORTHO05D006534 7.9e-08 62.8 192 27.1
Os06g0709100 Oryza sativa ssp. japonica HOM05D005374 ORTHO05D006534 1.0e-07 62.4 371 20.8
Aqoxy3G00850 Aquilegia oxysepala HOM05D005374 ORTHO05D006534 1.7e-07 61.6 371 21.0
Haze_08435 Corylus avellana HOM05D005374 ORTHO05D006534 1.7e-07 61.6 102 36.3
Dinv37427 Davidia involucrata HOM05D005374 ORTHO05D006534 1.7e-07 61.6 400 21.0
EL10Ac5g12585 Beta vulgaris HOM05D005374 ORTHO05D006534 3.0e-07 60.8 375 20.8
DCAR_004533 Daucus carota HOM05D005374 ORTHO05D006534 3.0e-07 60.8 371 20.5
PGR031G1488 Punica granatum HOM05D005374 ORTHO05D006534 3.0e-07 60.8 376 20.5
Prupe.1G353600 Prunus persica HOM05D005374 ORTHO05D006534 3.9e-07 60.5 372 20.4
Solyc08g075380.3 Solanum lycopersicum HOM05D005374 ORTHO05D006534 3.9e-07 60.5 373 20.6
Sopen08g024010 Solanum pennellii HOM05D005374 ORTHO05D006534 3.9e-07 60.5 373 20.6
Atru.chr8.2626 Acer truncatum HOM05D005374 ORTHO05D006534 5.1e-07 60.1 373 20.1
CAN.G998.19 Capsicum annuum HOM05D005374 ORTHO05D006534 5.1e-07 60.1 191 27.2
QL12p004193 Quercus lobata HOM05D005374 ORTHO05D006534 5.1e-07 60.1 322 20.8
Ah.12g058460 Amaranthus hybridus HOM05D005374 ORTHO05D006534 6.6e-07 59.7 374 21.4
BcaC04g21776 Brassica carinata HOM05D005374 ORTHO05D006534 6.6e-07 59.7 97 35.1
Medtr5g025560 Medicago truncatula HOM05D005374 ORTHO05D006534 8.7e-07 59.3 449 20.7
PGSC0003DMG400001963 Solanum tuberosum HOM05D005374 ORTHO05D006534 8.7e-07 59.3 373 20.4
Manes.15G191300 Manihot esculenta HOM05D005374 ORTHO05D006534 1.9e-06 58.2 375 20.3
A09p21700 Brassica napus HOM05D005374 ORTHO05D006534 2.5e-06 57.8 100 36.0
C09p27770 Brassica napus HOM05D005374 ORTHO05D006534 2.5e-06 57.8 100 36.0
SGA_v2.0_scaffold89G27377 Striga asiatica HOM05D005374 ORTHO05D006534 2.5e-06 57.8 376 20.7
Carub.0008s0275 Capsella rubella HOM05D005374 ORTHO05D006534 3.3e-06 57.4 447 19.9
Eucgr.E01146 Eucalyptus grandis HOM05D005374 ORTHO05D006534 3.3e-06 57.4 421 20.9
Pp3c9_17990 Physcomitrium patens HOM05D005374 ORTHO05D006534 3.3e-06 57.4 426 23.0
AUR62030411 Chenopodium quinoa HOM05D005374 ORTHO05D006534 4.3e-06 57.0 375 20.0
SalBow8G5130 Salvia bowleyana HOM05D005374 ORTHO05D006534 4.3e-06 57.0 378 20.6
Actinidia14732 Actinidia chinensis HOM05D005374 ORTHO05D006534 5.6e-06 56.6 386 20.7
SMO353G0174 Selaginella moellendorffii HOM05D005374 ORTHO05D006534 5.6e-06 56.6 190 27.9
arahy.Tifrunner.gnm1.ann1.B0SCIB Arachis hypogaea HOM05D005374 ORTHO05D006534 9.6e-06 55.8 448 19.0
arahy.Tifrunner.gnm1.ann1.BM6K92 Arachis hypogaea HOM05D005374 ORTHO05D006534 9.6e-06 55.8 448 19.0
Eucgr.G01888 Eucalyptus grandis HOM05D005374 ORTHO05D006534 9.6e-06 55.8 157 28.7
TAR629G2486 Trochodendron aralioides HOM05D005374 ORTHO05D006534 9.6e-06 55.8 331 20.5


User provided reference genes

Program Settings