Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g013250 Chlamydomonas reinhardtii HOM05D004534 ORTHO05D005413 6.7e-177 624.0 340 100.0
PRCOL_00005152 Prasinoderma coloniale HOM05D004534 ORTHO05D005413 1.0e-39 168.3 305 39.0
MSTRG.18620 Avicennia marina HOM05D004534 ORTHO05D005413 4.2e-38 162.9 328 32.0
Cc01_g11880 Coffea canephora HOM05D004534 ORTHO05D005413 4.2e-38 162.9 327 32.4
PGR044G2491 Punica granatum HOM05D004534 ORTHO05D005413 1.2e-37 161.4 328 32.0
Gorai.009G315700 Gossypium raimondii HOM05D004534 ORTHO05D005413 1.6e-37 161.0 333 32.7
Sp5g15770 Schrenkiella parvula HOM05D004534 ORTHO05D005413 2.7e-37 160.2 341 30.8
Ca_01369_v3 Cicer arietinum L. HOM05D004534 ORTHO05D005413 3.6e-37 159.8 329 31.6
Gohir.D05G298500 Gossypium hirsutum HOM05D004534 ORTHO05D005413 3.6e-37 159.8 333 31.8
AL5G24380 Arabidopsis lyrata HOM05D004534 ORTHO05D005413 4.7e-37 159.5 331 30.5
AT3G45740 Arabidopsis thaliana HOM05D004534 ORTHO05D005413 6.1e-37 159.1 331 30.8
Hma1.2p1_2042F.1_g312230 Hydrangea macrophylla HOM05D004534 ORTHO05D005413 6.1e-37 159.1 325 32.6
HPP92_003600 Vanilla planifolia HOM05D004534 ORTHO05D005413 8.0e-37 158.7 332 31.6
MD11G1120100 Malus domestica HOM05D004534 ORTHO05D005413 1.0e-36 158.3 330 30.9
Glyma.13G330000 Glycine max HOM05D004534 ORTHO05D005413 1.4e-36 157.9 328 32.0
Aqoxy4G03153 Aquilegia oxysepala HOM05D004534 ORTHO05D005413 1.8e-36 157.5 330 31.5
Psat5g281360 Pisum sativum HOM05D004534 ORTHO05D005413 1.8e-36 157.5 328 31.1
TWI31G1398 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 2.3e-36 157.1 326 31.3
A06p21280 Brassica napus HOM05D004534 ORTHO05D005413 3.0e-36 156.8 332 30.1
BraA06t25216Z Brassica rapa HOM05D004534 ORTHO05D005413 3.0e-36 156.8 332 30.1
Medtr2g095830 Medicago truncatula HOM05D004534 ORTHO05D005413 3.0e-36 156.8 328 30.8
PGR102G1844 Punica granatum HOM05D004534 ORTHO05D005413 3.0e-36 156.8 329 31.9
Lsat_1_v5_gn_8_20980 Lactuca sativa HOM05D004534 ORTHO05D005413 4.0e-36 156.4 328 29.9
Cfa011397 Carpinus fangiana HOM05D004534 ORTHO05D005413 5.2e-36 156.0 329 31.3
FAN11G3381 Fragaria x ananassa HOM05D004534 ORTHO05D005413 6.8e-36 155.6 339 31.3
Potri.008G045700 Populus trichocarpa HOM05D004534 ORTHO05D005413 6.8e-36 155.6 329 30.7
arahy.Tifrunner.gnm1.ann1.AW7LWX Arachis hypogaea HOM05D004534 ORTHO05D005413 1.2e-35 154.8 331 31.4
BcaB01g01071 Brassica carinata HOM05D004534 ORTHO05D005413 1.2e-35 154.8 333 30.3
Ciclev10031838m.g Citrus clementina HOM05D004534 ORTHO05D005413 1.2e-35 154.8 338 31.7
Lj3g0025326 Lotus japonicus HOM05D004534 ORTHO05D005413 1.2e-35 154.8 328 31.4
Lalb_Chr24g0394391 Lupinus albus HOM05D004534 ORTHO05D005413 1.5e-35 154.5 330 31.5
Migut.D02166 Erythranthe guttata HOM05D004534 ORTHO05D005413 2.0e-35 154.1 332 31.0
Nn2g10612 Nelumbo nucifera HOM05D004534 ORTHO05D005413 2.0e-35 154.1 330 30.6
arahy.Tifrunner.gnm1.ann1.NM19P7 Arachis hypogaea HOM05D004534 ORTHO05D005413 2.6e-35 153.7 331 31.4
Thecc.10G065400 Theobroma cacao HOM05D004534 ORTHO05D005413 3.4e-35 153.3 329 30.7
GSVIVG01025090001 Vitis vinifera HOM05D004534 ORTHO05D005413 3.4e-35 153.3 330 30.0
Phvul.L001232 Phaseolus vulgaris HOM05D004534 ORTHO05D005413 4.4e-35 152.9 332 31.6
FvH4_3g34110 Fragaria vesca HOM05D004534 ORTHO05D005413 5.7e-35 152.5 339 31.0
RcHm_v2.0_Chr5g0061761 Rosa chinensis HOM05D004534 ORTHO05D005413 5.7e-35 152.5 330 30.6
BolC3t19273H Brassica oleracea HOM05D004534 ORTHO05D005413 7.5e-35 152.1 327 30.3
CSS0009646 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 7.5e-35 152.1 323 29.7
Peaxi162Scf01024g00128 Petunia axillaris HOM05D004534 ORTHO05D005413 7.5e-35 152.1 349 31.5
Thhalv10002577m.g Eutrema salsugineum HOM05D004534 ORTHO05D005413 1.3e-34 151.4 327 30.0
Ciclev10030338m.g Citrus clementina HOM05D004534 ORTHO05D005413 1.7e-34 151.0 334 30.8
CsaV3_1G012750 Cucumis sativus L. HOM05D004534 ORTHO05D005413 2.2e-34 150.6 325 31.7
Cpa.g.sc139.34 Carica papaya HOM05D004534 ORTHO05D005413 2.8e-34 150.2 330 31.5
Potri.010G216000 Populus trichocarpa HOM05D004534 ORTHO05D005413 2.8e-34 150.2 326 30.1
TPR.G11635 Trifolium pratense HOM05D004534 ORTHO05D005413 2.8e-34 150.2 328 29.9
BcaC01g01956 Brassica carinata HOM05D004534 ORTHO05D005413 3.7e-34 149.8 327 30.0
C03p70180 Brassica napus HOM05D004534 ORTHO05D005413 3.7e-34 149.8 327 30.0
Sed0013966 Sechium edule HOM05D004534 ORTHO05D005413 3.7e-34 149.8 329 31.6
THA.LOC104814850 Tarenaya hassleriana HOM05D004534 ORTHO05D005413 3.7e-34 149.8 341 29.3
unitig_37.g12680 Utricularia gibba HOM05D004534 ORTHO05D005413 3.7e-34 149.8 339 30.4
GSVIVG01016358001 Vitis vinifera HOM05D004534 ORTHO05D005413 3.7e-34 149.8 329 30.1
TWI38G2053 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 4.9e-34 149.4 329 30.7
Atru.chr3.3749 Acer truncatum HOM05D004534 ORTHO05D005413 6.3e-34 149.1 330 29.4
CiPaw.01G277800 Carya illinoinensis HOM05D004534 ORTHO05D005413 6.3e-34 149.1 331 29.9
Migut.F02016 Erythranthe guttata HOM05D004534 ORTHO05D005413 6.3e-34 149.1 305 31.1
Hund18962 Selenicereus undatus HOM05D004534 ORTHO05D005413 6.3e-34 149.1 332 30.1
VMungo1080G0465 Vigna mungo HOM05D004534 ORTHO05D005413 6.3e-34 149.1 326 31.3
Gohir.A08G000096 Gossypium hirsutum HOM05D004534 ORTHO05D005413 8.3e-34 148.7 338 29.3
HanXRQChr08g0219701 Helianthus annuus HOM05D004534 ORTHO05D005413 8.3e-34 148.7 320 28.1
Gohir.D08G009000 Gossypium hirsutum HOM05D004534 ORTHO05D005413 1.1e-33 148.3 329 29.5
Nitab4.5_0004774g0020 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.1e-33 148.3 329 31.6
CARHR149920 Cardamine hirsuta HOM05D004534 ORTHO05D005413 1.8e-33 147.5 336 29.2
Manes.11G138500 Manihot esculenta HOM05D004534 ORTHO05D005413 1.8e-33 147.5 330 30.3
QL01p035546 Quercus lobata HOM05D004534 ORTHO05D005413 1.8e-33 147.5 336 29.5
EL10Ac2g03539 Beta vulgaris HOM05D004534 ORTHO05D005413 2.4e-33 147.1 323 31.3
CANSAT54G1456 Cannabis sativa HOM05D004534 ORTHO05D005413 2.4e-33 147.1 327 31.5
COL.COLO4_23775 Corchorus olitorius HOM05D004534 ORTHO05D005413 2.4e-33 147.1 329 30.4
Zm00001eb397220 Zea mays HOM05D004534 ORTHO05D005413 2.4e-33 147.1 338 30.8
Solyc06g075540.3 Solanum lycopersicum HOM05D004534 ORTHO05D005413 3.1e-33 146.7 329 30.7
FAN21G3213 Fragaria x ananassa HOM05D004534 ORTHO05D005413 4.1e-33 146.4 341 29.6
Actinidia03016 Actinidia chinensis HOM05D004534 ORTHO05D005413 5.4e-33 146.0 332 30.7
Ah.10g033090 Amaranthus hybridus HOM05D004534 ORTHO05D005413 7.0e-33 145.6 338 30.8
Dinv31374 Davidia involucrata HOM05D004534 ORTHO05D005413 7.0e-33 145.6 327 29.7
Cfa001577 Carpinus fangiana HOM05D004534 ORTHO05D005413 9.1e-33 145.2 328 29.9
ECA233G2770 Erigeron canadensis HOM05D004534 ORTHO05D000452 9.1e-33 145.2 332 28.9
Nitab4.5_0000270g0130 Nicotiana tabacum HOM05D004534 ORTHO05D005413 9.1e-33 145.2 331 31.4
Thecc.09G335300 Theobroma cacao HOM05D004534 ORTHO05D005413 1.2e-32 144.8 330 28.5
PGSC0003DMG402006611 Solanum tuberosum HOM05D004534 ORTHO05D005413 1.6e-32 144.4 327 30.3
ATR0582G124 Amborella trichopoda HOM05D004534 ORTHO05D005413 2.0e-32 144.1 331 29.6
EL10Ac7g15886 Beta vulgaris HOM05D004534 ORTHO05D005413 2.0e-32 144.1 302 30.8
AUR62009701 Chenopodium quinoa HOM05D004534 ORTHO05D005413 2.0e-32 144.1 317 30.3
MELO3C026849.2 Cucumis melo HOM05D004534 ORTHO05D005413 2.0e-32 144.1 325 30.5
Aa31LG4G14970 Aethionema arabicum HOM05D004534 ORTHO05D005413 2.7e-32 143.7 337 28.8
PSO384G4947 Papaver somniferum HOM05D004534 ORTHO05D005413 5.9e-32 142.5 329 30.1
Peaxi162Scf00072g00025 Petunia axillaris HOM05D004534 ORTHO05D005413 5.9e-32 142.5 329 30.7
Prupe.2G220600 Prunus persica HOM05D004534 ORTHO05D005413 7.7e-32 142.1 329 29.5
DCAR_018857 Daucus carota HOM05D004534 ORTHO05D005413 1.0e-31 141.7 326 28.5
RcHm_v2.0_Chr1g0364391 Rosa chinensis HOM05D004534 ORTHO05D005413 1.0e-31 141.7 325 30.5
Dinv32819 Davidia involucrata HOM05D004534 ORTHO05D005413 1.3e-31 141.4 328 29.6
PSO339G4951 Papaver somniferum HOM05D004534 ORTHO05D005413 1.3e-31 141.4 330 30.0
CAN.G394.3 Capsicum annuum HOM05D004534 ORTHO05D005413 1.7e-31 141.0 332 30.7
Mapoly0029s0123 Marchantia polymorpha HOM05D004534 ORTHO05D005413 2.3e-31 140.6 346 31.2
CSS0028612 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 2.9e-31 140.2 347 29.4
Nitab4.5_0000561g0030 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.9e-31 140.2 337 28.5
Os03g0284500 Oryza sativa ssp. japonica HOM05D004534 ORTHO05D005413 2.9e-31 140.2 330 30.9
Rhsim01G0222900 Rhododendron simsii HOM05D004534 ORTHO05D005413 2.9e-31 140.2 330 30.0
Lj1A180G32 Lonicera japonica HOM05D004534 ORTHO05D005413 5.0e-31 139.4 334 30.2
Atru.chr12.616 Acer truncatum HOM05D004534 ORTHO05D005413 8.6e-31 138.7 332 28.9
SMO118G0317 Selaginella moellendorffii HOM05D004534 ORTHO05D005413 3.3e-30 136.7 329 32.2
Haze_16951 Corylus avellana HOM05D004534 ORTHO05D005413 5.6e-30 136.0 342 28.4
CDE04G1344 Ceratophyllum demersum HOM05D004534 ORTHO05D005413 1.2e-29 134.8 303 29.7
MD07G1181700 Malus domestica HOM05D004534 ORTHO05D005413 1.6e-29 134.4 313 30.0
Pp3c16_8740 Physcomitrium patens HOM05D004534 ORTHO05D005413 2.1e-29 134.0 347 31.4
CsaV3_5G026040 Cucumis sativus L. HOM05D004534 ORTHO05D005413 2.8e-29 133.7 335 28.4
Gohir.A05G298800 Gossypium hirsutum HOM05D004534 ORTHO05D005413 1.0e-28 131.7 305 30.8
Sabra08G0032000 Salix brachista HOM05D004534 ORTHO05D005413 5.2e-28 129.4 305 29.8
SGA_v2.0_scaffold61G21215 Striga asiatica HOM05D004534 ORTHO05D005413 1.2e-27 128.3 190 38.4
Gorai.004G002200 Gossypium raimondii HOM05D004534 ORTHO05D005413 5.7e-27 125.9 289 28.4
Oeu055059.2 Olea europaea HOM05D004534 ORTHO05D005413 5.7e-27 125.9 310 28.1
Sc06g0008140 Simmondsia chinensis HOM05D004534 ORTHO05D005413 7.5e-27 125.6 306 29.7
FAN06G4936 Fragaria x ananassa HOM05D004534 ORTHO05D005413 2.9e-26 123.6 355 27.9
CSS0050279 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 3.7e-26 123.2 322 27.3
Duzib106G1068 Durio zibethinus HOM05D004534 ORTHO05D005413 8.3e-26 122.1 330 28.2
Manes.10G040600 Manihot esculenta HOM05D004534 ORTHO05D005413 8.3e-26 122.1 339 27.1
AUR62036245 Chenopodium quinoa HOM05D004534 ORTHO05D005413 3.2e-25 120.2 323 27.6
FAN25G2491 Fragaria x ananassa HOM05D004534 ORTHO05D005413 3.2e-25 120.2 357 27.5
MELO3C025495.2 Cucumis melo HOM05D004534 ORTHO05D005413 1.2e-24 118.2 351 27.4
Sopen06g031920 Solanum pennellii HOM05D004534 ORTHO05D005413 2.0e-24 117.5 205 35.6
CBR_g24062 Chara braunii HOM05D004534 ORTHO05D005413 1.3e-23 114.8 258 31.8
Nitab4.5_0000830g0040 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.7e-23 114.4 342 26.3
FAN01G1783 Fragaria x ananassa HOM05D004534 ORTHO05D005413 5.0e-23 112.8 350 28.0
vmacro14490 Vaccinium macrocarpon HOM05D004534 ORTHO05D005413 5.0e-23 112.8 389 25.2
Cfa024137 Carpinus fangiana HOM05D004534 ORTHO05D005413 6.6e-23 112.5 350 29.1
Sabra10G0167000 Salix brachista HOM05D004534 ORTHO05D005413 1.1e-22 111.7 305 25.9
Carub.0005s1159 Capsella rubella HOM05D004534 ORTHO05D005413 9.5e-22 108.6 272 27.2
Cc09_g02390 Coffea canephora HOM05D004534 ORTHO05D005413 1.6e-21 107.8 194 34.0
COL.COLO4_18394 Corchorus olitorius HOM05D004534 ORTHO05D005413 2.8e-21 107.1 305 25.9
Sed0004393 Sechium edule HOM05D004534 ORTHO05D005413 3.6e-21 106.7 192 32.8
Lj1A926G31 Lonicera japonica HOM05D004534 ORTHO05D005413 4.7e-21 106.3 306 27.1
AUR62036013 Chenopodium quinoa HOM05D004534 ORTHO05D005413 5.2e-20 102.8 342 26.0
Oeu051854.2 Olea europaea HOM05D004534 ORTHO05D005413 3.4e-19 100.1 287 27.2
FAN16G0790 Fragaria x ananassa HOM05D004534 ORTHO05D005413 8.3e-18 95.5 358 25.1
FAN03G3228 Fragaria x ananassa HOM05D004534 ORTHO05D005413 2.4e-17 94.0 317 25.9
Prupe.6G090300 Prunus persica HOM05D004534 ORTHO05D005413 9.2e-17 92.0 217 27.2
TAR633G1279 Trochodendron aralioides HOM05D004534 ORTHO05D005413 4.6e-16 89.7 217 27.6
FvH4_7g20500 Fragaria vesca HOM05D004534 ORTHO05D005413 6.0e-16 89.4 217 28.1
CiPaw.13G104100 Carya illinoinensis HOM05D004534 ORTHO05D005413 2.3e-15 87.4 218 28.0
QL08p057247 Quercus lobata HOM05D004534 ORTHO05D005413 6.6e-15 85.9 216 26.4
AagrBONN_evm.TU.Sc2ySwM_228.5090 Anthoceros agrestis HOM05D004534 ORTHO05D005413 5.6e-14 82.8 215 30.7
FAN06G3998 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.5e-11 74.7 430 22.3
Cpa.g.sc1.278 Carica papaya HOM05D004534 ORTHO05D005413 4.9e-10 69.7 104 40.4
AUR62035991 Chenopodium quinoa HOM05D004534 ORTHO05D005413 1.9e-09 67.8 98 40.8
ClCG09G020370 Citrullus lanatus HOM05D004534 ORTHO05D005413 2.4e-09 67.4 193 27.5
MBI18_g24932_MAGBIO Magnolia biondii HOM05D004534 ORTHO05D005413 2.7e-08 63.9 154 28.6
Nitab4.5_0000830g0060 Nicotiana tabacum HOM05D004534 ORTHO05D005413 6.0e-08 62.8 175 28.6


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