Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g007774 Chlamydomonas reinhardtii HOM05D001407 ORTHO05D001873 6.7e-206 721.5 735 100.0
Cre03.g145847 Chlamydomonas reinhardtii HOM05D001407 ORTHO05D143052 2.0e-08 65.5 53 52.8
PRCOL_00006847 Prasinoderma coloniale HOM05D001407 ORTHO05D333301 9.9e-08 63.2 59 47.5
A10p32740 Brassica napus HOM05D001407 ORTHO05D001314 2.9e-07 61.6 46 45.7
Carub.0006s0198 Capsella rubella HOM05D001407 ORTHO05D001314 1.1e-06 59.7 44 47.7
SalBow3G3601 Salvia bowleyana HOM05D001407 ORTHO05D001314 1.4e-06 59.3 46 43.5
GSVIVG01000020001 Vitis vinifera HOM05D001407 ORTHO05D001314 1.9e-06 58.9 49 40.8
AL6G12480 Arabidopsis lyrata HOM05D001407 ORTHO05D001314 3.2e-06 58.2 46 43.5
Sc13g0004000 Simmondsia chinensis HOM05D001407 ORTHO05D001314 3.2e-06 58.2 46 39.1
AT5G03200 Arabidopsis thaliana HOM05D001407 ORTHO05D001314 4.2e-06 57.8 44 45.5
CARHR193910 Cardamine hirsuta HOM05D001407 ORTHO05D001314 4.2e-06 57.8 49 38.8
Migut.N01945 Erythranthe guttata HOM05D001407 ORTHO05D001314 4.2e-06 57.8 49 40.8
Oeu043375.1 Olea europaea HOM05D001407 ORTHO05D001314 5.4e-06 57.4 46 39.1
Sp5g08930 Schrenkiella parvula HOM05D001407 ORTHO05D001314 5.4e-06 57.4 46 43.5
BcaB08g36616 Brassica carinata HOM05D001407 ORTHO05D001314 7.1e-06 57.0 49 38.8
A10p20610 Brassica napus HOM05D001407 ORTHO05D001314 7.1e-06 57.0 49 38.8
C09p57320 Brassica napus HOM05D001407 ORTHO05D001314 7.1e-06 57.0 49 38.8
BolC9t58604H Brassica oleracea HOM05D001407 ORTHO05D001314 7.1e-06 57.0 49 38.8
BraA10t44123Z Brassica rapa HOM05D001407 ORTHO05D001314 7.1e-06 57.0 49 38.8
Cre09.g399439 Chlamydomonas reinhardtii HOM05D001407 ORTHO05D144771 7.1e-06 57.0 48 39.6
Potri.013G025400 Populus trichocarpa HOM05D001407 ORTHO05D001314 7.1e-06 57.0 46 39.1
Sp6g25300 Schrenkiella parvula HOM05D001407 ORTHO05D001314 7.1e-06 57.0 46 41.3
SEGI_24366 Sequoiadendron giganteum HOM05D001948 ORTHO05D001873 7.1e-06 57.0 50 40.0
TAR365G0127 Trochodendron aralioides HOM05D001407 ORTHO05D001314 7.1e-06 57.0 46 41.3
AL3G16990 Arabidopsis lyrata HOM05D001407 ORTHO05D001314 9.3e-06 56.6 46 39.1
AL5G34330 Arabidopsis lyrata HOM05D001407 ORTHO05D001314 9.3e-06 56.6 46 41.3
AT3G06140 Arabidopsis thaliana HOM05D001407 ORTHO05D001314 9.3e-06 56.6 46 39.1
AT3G53410 Arabidopsis thaliana HOM05D001407 ORTHO05D001314 9.3e-06 56.6 46 41.3
Carub.0003s0557 Capsella rubella HOM05D001407 ORTHO05D001314 9.3e-06 56.6 46 39.1
ClCG05G005430 Citrullus lanatus HOM05D001407 ORTHO05D001314 9.3e-06 56.6 46 39.1
Thhalv10021004m.g Eutrema salsugineum HOM05D001407 ORTHO05D001314 9.3e-06 56.6 46 39.1
Zm00001eb287460 Zea mays HOM05D001407 ORTHO05D001314 9.3e-06 56.6 46 41.3


User provided reference genes

Program Settings