Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 2.5e-306 1054.7 549 100.0
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 5.4e-43 179.9 515 26.2
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 5.2e-38 163.3 484 25.6
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 6.8e-38 162.9 443 26.9
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 8.9e-38 162.5 484 24.8
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 1.2e-37 162.2 497 25.8
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.5e-37 161.8 480 26.0
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 5.8e-37 159.8 497 26.0
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 9.9e-37 159.1 469 25.8
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 9.9e-37 159.1 481 24.9
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 1.3e-36 158.7 489 24.9
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 1.7e-36 158.3 485 24.7
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 2.2e-36 157.9 442 27.6
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 2.9e-36 157.5 485 24.7
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 4.9e-36 156.8 445 23.6
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 6.4e-36 156.4 467 25.1
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 8.4e-36 156.0 471 25.7
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 8.4e-36 156.0 471 25.9
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 1.1e-35 155.6 443 27.3
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 1.4e-35 155.2 487 25.1
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 1.9e-35 154.8 528 27.1
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 1.9e-35 154.8 437 25.2
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 2.4e-35 154.5 463 25.1
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 2.4e-35 154.5 443 27.1
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 3.2e-35 154.1 439 24.8
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 3.2e-35 154.1 443 27.1
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 4.2e-35 153.7 468 24.8
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 4.2e-35 153.7 470 24.0
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 5.4e-35 153.3 437 24.7
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 5.4e-35 153.3 439 24.1
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 7.1e-35 152.9 463 25.1
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 7.1e-35 152.9 463 24.8
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 9.3e-35 152.5 434 25.6
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 1.2e-34 152.1 506 24.9
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.2e-34 152.1 439 24.6
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.6e-34 151.8 437 25.2
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 2.7e-34 151.0 467 23.8
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 3.5e-34 150.6 511 24.1
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 3.5e-34 150.6 439 24.1
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 3.5e-34 150.6 484 24.0
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 3.5e-34 150.6 468 24.6
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 4.6e-34 150.2 481 23.7
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 6.0e-34 149.8 440 24.8
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 1.0e-33 149.1 481 23.9
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.0e-33 149.1 466 27.7
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 1.0e-33 149.1 478 23.6
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 1.7e-33 148.3 481 25.4
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 1.7e-33 148.3 466 25.1
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 1.7e-33 148.3 495 23.8
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.7e-33 148.3 441 27.2
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 2.3e-33 147.9 469 24.7
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 2.3e-33 147.9 463 24.6
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 2.3e-33 147.9 486 24.1
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 2.3e-33 147.9 437 24.3
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 2.3e-33 147.9 466 24.0
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 3.0e-33 147.5 471 24.4
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 3.9e-33 147.1 470 24.3
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 3.9e-33 147.1 486 24.3
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 3.9e-33 147.1 492 23.8
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 5.1e-33 146.7 474 24.1
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 6.6e-33 146.4 466 24.0
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 8.7e-33 146.0 439 24.1
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 8.7e-33 146.0 463 24.4
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 1.1e-32 145.6 486 24.3
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 1.5e-32 145.2 439 24.8
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 1.9e-32 144.8 437 23.8
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 2.5e-32 144.4 531 24.1
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 4.3e-32 143.7 465 24.1
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 4.3e-32 143.7 465 24.3
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 5.6e-32 143.3 439 24.8
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 5.6e-32 143.3 438 24.0
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 7.3e-32 142.9 437 23.1
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 7.3e-32 142.9 453 23.8
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 7.3e-32 142.9 512 25.2
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 1.3e-31 142.1 477 24.7
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 1.3e-31 142.1 439 23.2
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.6e-31 141.7 445 24.7
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 3.6e-31 140.6 485 25.4
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 6.2e-31 139.8 478 25.3
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 8.1e-31 139.4 486 24.9
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 8.1e-31 139.4 467 23.6
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 8.1e-31 139.4 475 24.4
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 8.1e-31 139.4 440 23.4
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 1.4e-30 138.7 491 23.6
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 1.8e-30 138.3 467 22.3
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 2.4e-30 137.9 467 23.6
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 9.0e-30 136.0 497 23.5
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 1.2e-29 135.6 486 23.5
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 2.0e-29 134.8 442 24.7
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 2.6e-29 134.4 439 23.2
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 2.6e-29 134.4 486 23.3
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 7.6e-29 132.9 415 24.1
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 7.6e-29 132.9 477 24.1
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 2.9e-28 131.0 440 24.3
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 3.8e-28 130.6 498 23.5
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 3.8e-28 130.6 443 24.6
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 4.9e-28 130.2 443 24.6
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 3.2e-27 127.5 366 25.7
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 9.3e-27 125.9 439 24.6
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 3.5e-26 124.0 490 21.0
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 6.0e-26 123.2 467 21.8
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 6.6e-25 119.8 396 25.0
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 2.5e-24 117.9 527 23.7
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 2.8e-23 114.4 471 22.7
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 7.6e-21 106.3 316 24.1
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 6.4e-20 103.2 439 22.3
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 8.4e-20 102.8 268 26.5
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 5.5e-19 100.1 351 22.5
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 4.6e-18 97.1 423 24.3
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.3e-16 90.9 287 25.8
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 1.4e-06 58.9 438 22.8
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 4.1e-06 57.4 115 29.6


User provided reference genes

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