Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 8.6e-81 303.5 146 100.0
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 1.1e-64 250.0 146 80.8
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 1.9e-64 249.2 146 78.1
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 4.3e-64 248.1 145 79.3
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 5.6e-64 247.7 146 78.1
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 3.6e-63 245.0 144 78.5
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 4.8e-63 244.6 145 77.9
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 1.4e-62 243.0 144 77.1
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 2.4e-62 242.3 142 80.3
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 4.0e-62 241.5 144 77.8
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 5.3e-62 241.1 144 77.1
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 5.3e-62 241.1 144 75.0
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 6.9e-62 240.7 140 80.7
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 2.0e-61 239.2 146 77.4
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 2.0e-61 239.2 146 76.7
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 2.6e-61 238.8 144 75.7
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.5e-61 238.0 146 76.7
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 5.8e-61 237.7 146 74.7
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 5.8e-61 237.7 146 76.7
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 5.8e-61 237.7 144 76.4
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 1.3e-60 236.5 144 72.9
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 2.2e-60 235.7 144 76.4
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 2.2e-60 235.7 144 74.3
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.9e-60 235.3 144 76.4
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 4.9e-60 234.6 144 76.4
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 6.4e-60 234.2 144 75.7
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 8.4e-60 233.8 144 75.7
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 8.4e-60 233.8 143 74.1
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 8.4e-60 233.8 144 73.6
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 1.1e-59 233.4 144 74.3
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.9e-59 232.6 144 75.0
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 3.2e-59 231.9 143 76.2
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 5.4e-59 231.1 143 74.8
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 7.1e-59 230.7 146 71.9
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 2.1e-58 229.2 143 71.3
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 6.0e-58 227.6 144 70.8
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 6.0e-58 227.6 144 74.3
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 7.9e-58 227.3 144 71.5
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 7.9e-58 227.3 146 72.6
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 1.0e-57 226.9 144 73.6
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 1.3e-57 226.5 138 75.4
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 2.3e-57 225.7 144 73.6
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 3.0e-57 225.3 144 72.9
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 3.0e-57 225.3 144 69.4
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 3.9e-57 224.9 145 73.1
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 3.9e-57 224.9 146 72.6
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 6.7e-57 224.2 144 72.9
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 6.7e-57 224.2 142 73.2
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 8.7e-57 223.8 142 73.9
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 8.7e-57 223.8 145 73.1
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 1.5e-56 223.0 140 75.7
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 1.5e-56 223.0 142 74.6
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.9e-56 222.6 143 72.0
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 3.3e-56 221.9 140 73.6
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 3.3e-56 221.9 140 73.6
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 3.3e-56 221.9 144 72.2
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 4.3e-56 221.5 144 69.4
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 4.3e-56 221.5 144 70.8
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 5.6e-56 221.1 143 68.5
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 7.4e-56 220.7 144 68.8
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 9.6e-56 220.3 143 70.6
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 9.6e-56 220.3 142 71.8
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.3e-55 219.9 144 70.8
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 1.6e-55 219.5 144 66.7
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.6e-55 219.5 145 67.6
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 2.1e-55 219.2 145 73.1
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 2.8e-55 218.8 144 71.5
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 2.8e-55 218.8 144 68.1
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 2.8e-55 218.8 143 67.8
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 2.8e-55 218.8 143 69.2
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 4.8e-55 218.0 145 71.0
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 6.2e-55 217.6 144 69.4
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 1.1e-54 216.9 145 70.3
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 1.1e-54 216.9 144 66.7
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 1.4e-54 216.5 143 68.5
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 1.4e-54 216.5 142 70.4
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 3.1e-54 215.3 145 69.7
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 3.1e-54 215.3 145 69.7
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 3.1e-54 215.3 143 68.5
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 3.1e-54 215.3 143 67.8
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.5e-53 213.0 142 69.0
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 7.6e-53 210.7 143 67.8
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 2.9e-52 208.8 143 65.7
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 3.8e-52 208.4 144 61.8
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 8.4e-52 207.2 144 69.4
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 5.5e-51 204.5 139 66.9
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 7.1e-51 204.1 135 66.7
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 1.0e-49 200.3 144 64.6
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 3.3e-48 195.3 149 63.1
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 1.4e-46 189.9 139 62.6
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 2.9e-44 182.2 143 59.4
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 1.4e-43 179.9 143 58.0
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 2.7e-42 175.6 143 55.9
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 2.3e-41 172.6 142 57.0
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.0e-36 157.1 111 65.8
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 2.2e-36 156.0 142 48.6
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.1e-35 153.7 94 73.4
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 6.7e-33 144.4 94 70.2
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 1.0e-28 130.6 86 69.8
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 2.5e-27 125.9 147 44.9
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 8.8e-17 90.9 57 73.7
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 9.7e-16 87.4 55 70.9
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 8.2e-15 84.3 133 38.3
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.5e-13 79.0 49 69.4
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 1.1e-11 73.9 35 91.4
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 1.9e-11 73.2 54 57.4
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 6.1e-10 68.2 42 71.4
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.5e-08 63.5 34 70.6


User provided reference genes

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