Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 1.2e-80 303.1 149 100.0
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 3.6e-26 122.1 140 48.6
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 8.1e-26 120.9 140 46.4
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 1.8e-25 119.8 140 47.9
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 2.4e-25 119.4 140 47.1
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 3.1e-25 119.0 140 45.7
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 4.0e-25 118.6 141 48.2
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 5.2e-25 118.2 140 47.9
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 9.0e-25 117.5 140 46.4
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 9.0e-25 117.5 140 46.4
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 2.0e-24 116.3 140 46.4
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 2.0e-24 116.3 151 49.7
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 2.6e-24 115.9 140 46.4
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 2.6e-24 115.9 140 47.9
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 4.4e-24 115.2 140 45.7
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 7.6e-24 114.4 133 48.1
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.3e-23 113.6 140 49.3
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 1.7e-23 113.2 137 48.2
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 2.2e-23 112.8 141 47.5
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 2.2e-23 112.8 141 46.8
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 2.9e-23 112.5 139 46.8
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.9e-23 112.5 129 50.4
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 3.8e-23 112.1 135 48.9
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 4.9e-23 111.7 140 49.3
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 4.9e-23 111.7 140 46.4
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 4.9e-23 111.7 141 47.5
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 4.9e-23 111.7 145 46.9
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 6.4e-23 111.3 140 48.6
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 6.4e-23 111.3 140 48.6
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 6.4e-23 111.3 128 50.0
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 6.4e-23 111.3 137 43.8
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 6.4e-23 111.3 140 45.7
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 6.4e-23 111.3 125 50.4
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 8.4e-23 110.9 140 47.1
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 1.1e-22 110.5 141 48.2
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.9e-22 109.8 141 47.5
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 1.9e-22 109.8 135 45.2
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 2.4e-22 109.4 140 45.0
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 2.4e-22 109.4 137 48.2
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 3.2e-22 109.0 139 46.0
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 3.2e-22 109.0 144 46.5
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 3.2e-22 109.0 140 47.1
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 4.2e-22 108.6 141 47.5
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.2e-22 108.6 140 46.4
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 5.4e-22 108.2 139 47.5
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 5.4e-22 108.2 137 47.4
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 5.4e-22 108.2 137 45.3
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.2e-21 107.1 131 43.5
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 2.1e-21 106.3 156 42.3
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 2.1e-21 106.3 140 43.6
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 2.1e-21 106.3 141 46.1
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 2.1e-21 106.3 134 41.8
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 2.7e-21 105.9 123 47.2
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 3.5e-21 105.5 128 46.9
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 4.6e-21 105.1 129 47.3
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 6.0e-21 104.8 141 42.6
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 6.0e-21 104.8 141 42.6
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 7.8e-21 104.4 126 44.4
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.0e-20 104.0 134 43.3
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 1.0e-20 104.0 127 41.7
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 1.3e-20 103.6 126 44.4
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 1.3e-20 103.6 140 42.1
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 1.3e-20 103.6 126 45.2
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 1.7e-20 103.2 132 42.4
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 2.3e-20 102.8 134 46.3
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 2.3e-20 102.8 139 43.9
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 3.9e-20 102.1 123 44.7
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 3.9e-20 102.1 127 48.0
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 5.1e-20 101.7 125 43.2
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 5.1e-20 101.7 125 45.6
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 6.6e-20 101.3 126 47.6
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 1.1e-19 100.5 128 44.5
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.5e-19 100.1 139 40.3
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 2.5e-19 99.4 124 43.5
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 2.5e-19 99.4 133 40.6
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 3.3e-19 99.0 134 44.8
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 3.3e-19 99.0 140 40.7
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 4.3e-19 98.6 139 36.0
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 5.6e-19 98.2 133 42.1
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 7.3e-19 97.8 134 42.5
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 7.3e-19 97.8 125 42.4
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 7.3e-19 97.8 125 42.4
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 1.3e-18 97.1 139 40.3
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 1.6e-18 96.7 139 41.0
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 1.6e-18 96.7 125 41.6
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 2.1e-18 96.3 124 41.1
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 3.6e-18 95.5 131 40.5
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 4.8e-18 95.1 130 42.3
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 1.4e-17 93.6 137 38.7
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 3.1e-17 92.4 128 39.8
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 2.9e-15 85.9 126 34.1
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 3.8e-15 85.5 109 46.8
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.1e-09 67.4 36 77.8
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 3.1e-09 65.9 40 70.0
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 1.5e-08 63.5 36 69.4
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 2.0e-08 63.2 125 30.4
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 2.6e-08 62.8 36 69.4
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 5.8e-08 61.6 122 33.6
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 7.6e-08 61.2 34 73.5
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 9.9e-08 60.8 54 53.7
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 9.9e-08 60.8 33 78.8
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 1.3e-07 60.5 33 69.7
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 1.3e-07 60.5 39 66.7
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.7e-07 60.1 36 63.9
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 2.2e-07 59.7 130 30.0
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 6.4e-07 58.2 126 31.7
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 7.1e-06 54.7 36 55.6


User provided reference genes

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