Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc98.12 Carica papaya HOM05D000004 ORTHO05D000002 4.1e-59 231.1 111 100.0
Cpa.g.sc4.133 Carica papaya HOM05D000004 ORTHO05D000002 6.7e-17 90.9 103 49.5
Oeu015199.1 Olea europaea HOM05D000004 ORTHO05D000002 8.7e-17 90.5 113 41.6
Manes.08G059801 Manihot esculenta HOM05D000004 ORTHO05D000002 4.3e-16 88.2 105 49.5
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 4.3e-16 88.2 110 49.1
Cpa.g.sc9.320 Carica papaya HOM05D008870 ORTHO05D010906 7.4e-16 87.4 99 48.5
Manes.17G118357 Manihot esculenta HOM05D000004 ORTHO05D000002 7.4e-16 87.4 103 48.5
Manes.17G016004 Manihot esculenta HOM05D000004 ORTHO05D000002 9.7e-16 87.0 103 48.5
Cpa.g.sc23.138 Carica papaya HOM05D000004 ORTHO05D000002 2.2e-15 85.9 105 45.7
Manes.06G033812 Manihot esculenta HOM05D000004 ORTHO05D000002 3.7e-15 85.1 103 48.5
SHI02827 Sapria himalayana HOM05D000004 ORTHO05D000002 6.3e-15 84.3 110 49.1
BolC2t11371H Brassica oleracea HOM05D000004 ORTHO05D000002 1.1e-14 83.6 113 43.4
Manes.03G138751 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-14 83.6 103 46.6
Cpa.g.sc4.25 Carica papaya HOM05D000004 ORTHO05D000002 1.4e-14 83.2 102 47.1
Cpa.g.sc177.16 Carica papaya HOM05D000004 ORTHO05D000002 5.3e-14 81.3 79 57.0
Manes.17G007266 Manihot esculenta HOM05D000004 ORTHO05D000002 2.0e-13 79.3 98 45.9
Manes.12G088990 Manihot esculenta HOM05D000004 ORTHO05D000002 2.9e-12 75.5 111 43.2
SHI48351 Sapria himalayana HOM05D000004 ORTHO05D000002 3.8e-12 75.1 106 40.6
Thhalv10026804m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 8.5e-12 73.9 113 35.4
Thhalv10027465m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 8.5e-12 73.9 113 35.4
Sp7g21440 Schrenkiella parvula HOM05D000004 ORTHO05D000002 8.5e-12 73.9 107 43.0
Thhalv10012141m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 4.2e-11 71.6 106 36.8
BolC6t38605H Brassica oleracea HOM05D000004 ORTHO05D000002 2.1e-10 69.3 102 42.2
Cpa.g.sc112.85 Carica papaya HOM05D000004 ORTHO05D000002 3.0e-09 65.5 47 66.0
QL05p032758 Quercus lobata HOM05D000004 ORTHO05D000002 1.1e-08 63.5 108 36.1
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.3e-08 62.0 109 38.5
Cpa.g.sc44.47 Carica papaya HOM05D008870 ORTHO05D000002 9.7e-08 60.5 36 83.3
Cpa.g.sc56.84 Carica papaya HOM05D000004 ORTHO05D000002 9.7e-08 60.5 82 46.3
Cpa.g.sc19.210 Carica papaya HOM05D000004 ORTHO05D000002 3.7e-07 58.5 41 58.5
Ciclev10029955m.g Citrus clementina HOM05D000004 ORTHO05D000002 3.7e-07 58.5 102 32.4
ECA240G0488 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-07 58.5 116 31.9
SpUn0005_0210 Schrenkiella parvula HOM05D000004 ORTHO05D000002 4.8e-07 58.2 52 46.2
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 8.2e-07 57.4 116 34.5
Cpa.g.sc15.136 Carica papaya HOM05D000004 ORTHO05D000002 1.1e-06 57.0 44 70.5
Cpa.g.sc8.320 Carica papaya HOM05D008870 ORTHO05D010906 2.4e-06 55.8 39 59.0
Ciclev10024141m.g Citrus clementina HOM05D000005 ORTHO05D000012 3.1e-06 55.5 48 47.9
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 3.1e-06 55.5 103 35.0
SHI02379 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-06 55.1 103 35.9
SpUn0035_0010 Schrenkiella parvula HOM05D000004 ORTHO05D000002 4.1e-06 55.1 52 46.2
Ciclev10023331m.g Citrus clementina HOM05D000004 ORTHO05D000002 5.3e-06 54.7 102 30.4
Thhalv10017833m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 5.3e-06 54.7 109 33.0
PSO675G8328 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-06 54.7 79 39.2


User provided reference genes

Program Settings