Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 2.5e-125 452.2 242 100.0
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 3.2e-64 249.2 232 59.9
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 4.2e-64 248.8 232 59.9
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 2.1e-63 246.5 230 59.1
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 6.0e-63 245.0 229 57.6
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 7.4e-61 238.0 227 57.7
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 6.2e-60 235.0 236 54.2
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 1.1e-59 234.2 231 55.8
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 3.1e-59 232.6 233 56.2
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 5.3e-59 231.9 232 56.0
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 6.9e-59 231.5 236 53.4
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 6.9e-59 231.5 227 54.6
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 9.0e-59 231.1 217 59.9
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 2.6e-58 229.6 214 57.9
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 4.5e-58 228.8 233 54.9
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 7.6e-58 228.0 228 55.7
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 7.6e-58 228.0 228 55.7
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.0e-57 227.6 217 59.4
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 2.2e-57 226.5 217 59.0
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 3.8e-57 225.7 193 61.7
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 5.0e-57 225.3 222 58.6
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 1.9e-56 223.4 238 54.2
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 4.2e-56 222.2 211 58.3
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 1.2e-55 220.7 234 54.7
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 2.7e-55 219.5 233 57.1
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 6.1e-55 218.4 207 58.5
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 2.5e-53 213.0 201 59.2
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 7.4e-53 211.5 232 48.7
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 9.7e-53 211.1 188 60.6
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.8e-52 209.5 232 48.7
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 1.8e-51 206.8 218 52.8
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 4.1e-51 205.7 168 63.7
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 6.9e-51 204.9 235 51.9
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 9.0e-51 204.5 241 49.8
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 9.0e-51 204.5 187 56.1
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 9.0e-51 204.5 209 55.5
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 1.2e-50 204.1 237 53.6
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 2.0e-50 203.4 195 56.9
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 2.6e-50 203.0 212 56.1
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 3.4e-50 202.6 167 60.5
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 5.9e-50 201.8 196 57.1
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 5.9e-50 201.8 196 57.1
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 5.9e-50 201.8 229 52.8
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 7.7e-50 201.4 191 56.0
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 1.3e-49 200.7 230 52.6
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 2.9e-49 199.5 233 51.1
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 3.8e-49 199.1 200 58.5
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 5.0e-49 198.7 233 46.8
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 5.0e-49 198.7 205 55.6
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 5.0e-49 198.7 173 59.0
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 1.1e-48 197.6 205 53.7
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 3.6e-47 192.6 235 49.4
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 4.6e-47 192.2 191 55.0
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 4.6e-47 192.2 236 50.8
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 2.3e-46 189.9 205 53.2
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 3.9e-46 189.1 231 51.5
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 3.9e-46 189.1 229 48.9
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 8.8e-46 188.0 228 49.6
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 1.3e-44 184.1 162 58.0
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 4.8e-44 182.2 158 62.0
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 4.1e-43 179.1 159 59.7
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 4.1e-43 179.1 228 51.3
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 6.9e-43 178.3 235 48.5
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 6.9e-43 178.3 160 60.0
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 6.9e-43 178.3 159 59.7
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 9.1e-43 177.9 219 47.9
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 5.9e-42 175.3 234 47.0
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 5.9e-42 175.3 228 50.4
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 3.8e-41 172.6 229 51.1
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 1.1e-40 171.0 159 56.6
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 5.5e-40 168.7 204 52.0
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 9.4e-40 167.9 139 60.4
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 4.7e-39 165.6 224 48.2
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 6.1e-39 165.2 225 48.0
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 1.0e-38 164.5 205 50.7
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 2.0e-37 160.2 232 49.1
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 2.6e-37 159.8 208 51.4
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 3.3e-37 159.5 166 54.8
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 4.4e-37 159.1 206 50.0
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 2.8e-36 156.4 224 46.9
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 4.8e-36 155.6 191 47.1
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 6.3e-36 155.2 222 50.0
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 6.3e-36 155.2 222 50.0
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 1.8e-35 153.7 203 47.8
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 3.1e-35 152.9 220 48.2
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 1.6e-34 150.6 165 53.3
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 2.6e-34 149.8 204 48.5
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 1.5e-32 144.1 180 50.0
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 6.7e-30 135.2 185 40.0
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 2.4e-27 126.7 204 45.6
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 2.0e-26 123.6 114 54.4
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 2.7e-26 123.2 114 57.0
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 7.7e-26 121.7 155 41.3
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 7.2e-24 115.2 190 44.7
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 1.6e-23 114.0 183 44.8
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 1.4e-22 110.9 159 42.1
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 4.8e-20 102.4 155 40.6
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 8.0e-15 85.1 90 50.0
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 1.6e-07 60.8 163 30.7
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 6.1e-07 58.9 165 29.7
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 8.0e-07 58.5 91 39.6


User provided reference genes

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