Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 4.4e-77 291.6 188 100.0
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 6.5e-65 251.1 151 90.7
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 9.5e-64 247.3 151 87.4
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.2e-63 246.9 151 86.1
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 8.0e-63 244.2 150 84.7
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 8.0e-63 244.2 151 85.4
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 2.3e-62 242.7 151 84.8
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 3.0e-62 242.3 150 86.7
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 5.2e-62 241.5 151 86.8
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 5.2e-62 241.5 150 84.0
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 6.8e-62 241.1 150 84.0
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 6.8e-62 241.1 150 84.0
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 6.8e-62 241.1 150 84.0
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 6.8e-62 241.1 150 84.0
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 1.2e-61 240.4 150 84.0
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 2.6e-61 239.2 150 83.3
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 4.4e-61 238.4 150 82.7
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 5.7e-61 238.0 150 83.3
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 5.7e-61 238.0 150 83.3
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 5.7e-61 238.0 150 83.3
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 7.5e-61 237.7 151 84.8
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 7.5e-61 237.7 151 84.1
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 9.8e-61 237.3 150 84.0
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 9.8e-61 237.3 151 84.8
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 1.3e-60 236.9 149 85.2
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 1.3e-60 236.9 150 83.3
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 1.3e-60 236.9 151 84.1
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 1.7e-60 236.5 151 83.4
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 1.7e-60 236.5 151 83.4
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 2.2e-60 236.1 150 82.7
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 2.2e-60 236.1 151 84.1
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 4.9e-60 235.0 150 82.0
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 6.3e-60 234.6 151 83.4
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.4e-59 233.4 149 81.9
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 1.4e-59 233.4 149 82.6
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 1.4e-59 233.4 150 82.0
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 1.8e-59 233.0 151 82.1
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 3.1e-59 232.3 149 82.6
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 4.1e-59 231.9 151 81.5
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 7.0e-59 231.1 149 81.9
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 9.2e-59 230.7 149 81.9
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 9.2e-59 230.7 151 82.1
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 9.2e-59 230.7 151 82.1
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 9.2e-59 230.7 149 83.2
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 9.2e-59 230.7 150 81.3
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 1.2e-58 230.3 150 80.7
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 1.2e-58 230.3 150 82.0
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 2.0e-58 229.6 151 82.1
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 2.0e-58 229.6 148 83.1
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 2.7e-58 229.2 151 81.5
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 3.5e-58 228.8 149 82.6
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 3.5e-58 228.8 149 81.9
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 4.5e-58 228.4 150 81.3
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 5.9e-58 228.0 151 80.8
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 7.8e-58 227.6 152 80.3
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 1.3e-57 226.9 147 83.0
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 1.3e-57 226.9 149 81.2
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 1.3e-57 226.9 149 82.6
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 2.9e-57 225.7 151 78.8
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 3.8e-57 225.3 149 81.9
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 3.8e-57 225.3 151 80.8
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 3.8e-57 225.3 148 82.4
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 8.6e-57 224.2 151 80.1
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 8.6e-57 224.2 151 80.1
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 8.6e-57 224.2 151 80.1
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 8.6e-57 224.2 152 78.3
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 1.5e-56 223.4 150 77.3
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 1.5e-56 223.4 152 80.3
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 1.9e-56 223.0 151 78.1
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 1.9e-56 223.0 149 79.9
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 3.3e-56 222.2 151 79.5
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 7.3e-56 221.1 151 79.5
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 2.8e-55 219.2 149 79.2
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 8.0e-55 217.6 151 76.8
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 1.0e-54 217.2 150 82.0
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 1.4e-54 216.9 148 77.7
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 3.0e-54 215.7 150 76.7
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 5.2e-54 214.9 138 82.6
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 1.5e-53 213.4 138 81.2
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 3.4e-53 212.2 149 77.2
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 9.8e-53 210.7 149 75.8
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 5.4e-51 204.9 152 72.4
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 7.0e-51 204.5 141 78.7
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 1.0e-49 200.7 150 76.0
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 1.3e-49 200.3 131 78.6
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 1.3e-49 200.3 150 75.3
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 2.3e-49 199.5 134 77.6
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 3.9e-49 198.7 148 69.6
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 8.0e-47 191.0 132 75.0
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 8.0e-47 191.0 150 68.7
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 1.2e-42 177.2 118 80.5
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 2.5e-40 169.5 106 85.8
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 1.4e-38 163.7 150 68.0
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 2.0e-37 159.8 149 59.7
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 2.2e-36 156.4 149 58.4
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 2.1e-34 149.8 102 76.5
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 1.4e-30 137.1 82 91.5
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 8.9e-30 134.4 82 90.2
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 3.0e-25 119.4 137 46.7
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 3.9e-25 119.0 75 76.0
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.4e-22 110.5 74 79.7
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 2.4e-22 109.8 89 65.2
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 6.4e-20 101.7 69 72.5
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 1.2e-18 97.4 102 58.8
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 2.5e-16 89.7 58 81.0
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 3.4e-13 79.3 112 39.3
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 1.2e-10 70.9 48 75.0
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.1e-10 70.1 46 78.3
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 4.6e-10 68.9 111 40.5
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 8.7e-09 64.7 103 35.9
FAN06G0875 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.4e-06 56.6 37 75.7


User provided reference genes

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