Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 1.7e-82 309.3 158 100.0
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.2e-50 202.6 165 67.9
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 2.9e-50 202.2 167 65.9
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 1.5e-49 199.9 169 69.2
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 2.5e-49 199.1 163 69.3
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 5.5e-49 198.0 169 68.6
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 7.2e-49 197.6 163 69.3
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 2.1e-48 196.1 167 65.9
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 2.7e-48 195.7 169 63.3
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 3.6e-48 195.3 163 66.3
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 6.1e-48 194.5 163 64.4
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 8.8e-47 190.7 163 66.9
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 2.0e-46 189.5 164 64.6
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 5.7e-46 188.0 163 65.6
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 1.4e-44 183.3 164 62.2
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 1.8e-44 183.0 163 64.4
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 9.1e-44 180.6 168 60.1
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.2e-43 180.3 165 62.4
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.6e-43 179.9 168 62.5
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.6e-43 179.9 170 61.2
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 3.5e-43 178.7 168 58.9
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 4.5e-43 178.3 167 60.5
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 4.5e-43 178.3 163 62.0
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 4.5e-43 178.3 163 62.0
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 7.7e-43 177.6 168 59.5
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 2.2e-42 176.0 167 61.1
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.8e-42 175.3 167 59.3
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 5.0e-42 174.9 167 58.7
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 4.2e-41 171.8 168 56.5
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 4.2e-41 171.8 168 56.5
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 7.2e-41 171.0 170 57.1
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.1e-40 169.5 168 56.0
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.7e-40 169.1 168 56.5
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 3.6e-40 168.7 170 56.5
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 8.0e-40 167.5 170 56.5
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.8e-39 166.4 163 62.0
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 1.8e-39 166.4 167 55.1
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 3.0e-39 165.6 168 57.7
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 4.0e-39 165.2 168 54.8
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 4.0e-39 165.2 172 52.9
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.2e-38 163.7 164 56.1
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.2e-38 163.7 168 56.5
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 2.0e-38 162.9 169 51.5
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 3.4e-38 162.2 175 53.7
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 4.4e-38 161.8 175 53.7
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 1.7e-37 159.8 167 58.7
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.7e-37 158.7 164 55.5
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 4.9e-37 158.3 169 56.2
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 4.9e-37 158.3 170 52.4
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 6.3e-37 157.9 164 55.5
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 1.8e-36 156.4 173 56.1
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 9.2e-36 154.1 164 56.1
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 5.9e-35 151.4 170 51.8
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 5.9e-35 151.4 175 53.1
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 1.7e-34 149.8 172 50.6
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 2.3e-34 149.4 179 54.2
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 2.3e-34 149.4 166 53.0
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 3.8e-34 148.7 163 54.0
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 5.0e-34 148.3 159 49.1
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 6.6e-34 147.9 166 50.0
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 3.3e-33 145.6 162 51.2
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 1.0e-31 140.6 165 50.9
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 1.8e-31 139.8 166 48.8
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.0e-31 139.0 163 50.3
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 5.2e-31 138.3 164 50.6
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 1.5e-30 136.7 158 51.9
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 3.4e-30 135.6 165 48.5
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 4.4e-30 135.2 155 51.0
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 2.9e-29 132.5 162 43.8
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 3.7e-29 132.1 166 47.0
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 4.9e-29 131.7 161 49.7
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 6.4e-29 131.3 167 52.7
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 6.4e-29 131.3 167 49.1
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 6.4e-29 131.3 167 49.1
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 8.3e-29 131.0 166 50.6
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 8.3e-29 131.0 167 49.1
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 3.2e-28 129.0 163 48.5
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 3.2e-28 129.0 160 50.6
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 5.4e-28 128.3 167 47.3
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 2.0e-27 126.3 180 46.1
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 2.7e-27 125.9 160 48.1
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 3.5e-27 125.6 164 47.0
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 5.9e-27 124.8 166 44.0
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 7.8e-27 124.4 156 50.6
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 1.0e-26 124.0 171 45.6
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 1.7e-26 123.2 189 41.8
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 2.3e-26 122.9 209 40.7
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 2.3e-26 122.9 166 45.8
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 2.3e-26 122.9 204 43.6
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 3.9e-26 122.1 209 40.7
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 5.0e-26 121.7 186 42.5
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 1.1e-25 120.6 168 44.6
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 1.9e-25 119.8 186 39.8
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 1.9e-25 119.8 159 44.7
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 2.5e-25 119.4 167 44.3
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 2.5e-25 119.4 145 49.7
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 3.3e-25 119.0 186 41.9
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 4.3e-25 118.6 186 41.9
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 4.3e-25 118.6 186 41.9
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 4.3e-25 118.6 186 41.9
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 4.3e-25 118.6 168 45.2
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 4.3e-25 118.6 171 45.6
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 5.6e-25 118.2 185 40.5
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 5.6e-25 118.2 172 41.3
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 7.3e-25 117.9 163 50.3
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 9.5e-25 117.5 167 46.1
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 1.2e-24 117.1 162 45.7
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 2.1e-24 116.3 216 38.9
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 2.1e-24 116.3 167 45.5
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 2.8e-24 115.9 177 42.4
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 2.8e-24 115.9 158 47.5
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.8e-24 115.9 167 44.9
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 6.2e-24 114.8 158 44.9
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 8.9e-23 110.9 158 46.8
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 1.2e-22 110.5 183 38.8
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 1.3e-21 107.1 136 51.5
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 3.2e-20 102.4 158 41.8
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 2.0e-19 99.8 150 39.3
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.0e-18 95.1 160 39.4
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.0e-18 95.1 159 39.0
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 8.6e-18 94.4 152 42.8
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.9e-17 93.2 156 42.9
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 9.5e-17 90.9 163 45.4
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 2.1e-16 89.7 159 41.5
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 2.3e-15 86.3 156 34.6
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 3.1e-15 85.9 158 37.3
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 4.0e-15 85.5 193 35.8
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 7.5e-14 81.3 155 39.4
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 7.5e-14 81.3 124 42.7
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 1.6e-11 73.6 161 33.5
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 3.5e-11 72.4 152 34.9
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 6.0e-11 71.6 152 34.2
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 3.9e-10 68.9 150 34.0
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 3.3e-09 65.9 74 48.6


User provided reference genes

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