Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 1.6e-58 229.2 115 100.0
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 3.5e-29 131.7 153 51.6
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 3.5e-29 131.7 156 50.6
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 2.3e-28 129.0 157 49.0
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 5.1e-28 127.9 156 50.0
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 1.1e-27 126.7 157 47.8
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 3.3e-27 125.2 151 51.0
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 5.7e-27 124.4 157 49.0
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 9.6e-27 123.6 151 49.7
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 1.6e-26 122.9 157 47.8
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 1.6e-26 122.9 156 50.0
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 2.8e-26 122.1 157 45.9
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 2.8e-26 122.1 157 45.9
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 6.3e-26 120.9 155 49.0
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 6.3e-26 120.9 155 49.0
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 8.2e-26 120.6 155 49.0
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 1.1e-25 120.2 151 48.3
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 1.4e-25 119.8 157 47.1
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 2.4e-25 119.0 150 49.3
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 3.1e-25 118.6 150 49.3
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 3.1e-25 118.6 151 48.3
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 4.1e-25 118.2 150 49.3
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 4.1e-25 118.2 156 46.2
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 4.1e-25 118.2 151 48.3
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 4.1e-25 118.2 151 49.0
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 6.9e-25 117.5 150 48.7
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 6.9e-25 117.5 150 48.7
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 6.9e-25 117.5 150 48.7
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 6.9e-25 117.5 151 48.3
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 6.9e-25 117.5 151 48.3
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 6.9e-25 117.5 151 47.7
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 9.0e-25 117.1 150 49.3
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 9.0e-25 117.1 156 46.2
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.2e-24 116.7 156 46.2
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 1.5e-24 116.3 158 45.6
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 1.5e-24 116.3 150 48.7
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 1.5e-24 116.3 151 46.4
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 2.0e-24 115.9 156 46.2
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 2.0e-24 115.9 151 47.0
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 2.0e-24 115.9 150 48.0
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 2.6e-24 115.5 156 45.5
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 2.6e-24 115.5 156 45.5
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 2.6e-24 115.5 156 45.5
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 3.4e-24 115.2 156 46.2
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 3.4e-24 115.2 155 47.1
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 4.5e-24 114.8 156 47.4
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 5.9e-24 114.4 156 44.9
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 5.9e-24 114.4 156 45.5
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 5.9e-24 114.4 151 45.7
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 7.6e-24 114.0 158 44.3
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 7.6e-24 114.0 156 46.2
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 7.6e-24 114.0 151 47.7
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 7.6e-24 114.0 158 43.7
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 1.0e-23 113.6 157 46.5
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 1.3e-23 113.2 151 45.7
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 1.7e-23 112.8 158 44.3
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 1.7e-23 112.8 156 44.9
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 2.2e-23 112.5 156 44.9
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 2.2e-23 112.5 156 44.2
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 2.2e-23 112.5 156 44.9
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 2.2e-23 112.5 156 44.9
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 2.2e-23 112.5 156 44.9
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 2.2e-23 112.5 156 45.5
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 2.9e-23 112.1 156 44.9
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 5.0e-23 111.3 151 46.4
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 5.0e-23 111.3 156 44.2
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 5.0e-23 111.3 156 44.2
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 6.5e-23 110.9 151 45.0
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 6.5e-23 110.9 158 44.3
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 1.4e-22 109.8 151 44.4
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 1.9e-22 109.4 155 45.8
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 1.9e-22 109.4 158 43.0
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 1.9e-22 109.4 151 45.7
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 2.5e-22 109.0 151 45.0
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 2.5e-22 109.0 156 44.2
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 3.2e-22 108.6 150 46.7
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 3.2e-22 108.6 151 45.0
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 9.3e-22 107.1 148 43.9
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 1.2e-21 106.7 158 42.4
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 1.6e-21 106.3 158 41.8
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 3.5e-21 105.1 151 44.4
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 1.0e-20 103.6 151 45.0
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 1.0e-20 103.6 157 40.8
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 1.3e-20 103.2 156 44.2
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 1.8e-20 102.8 156 42.3
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 2.3e-20 102.4 156 41.0
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 2.3e-20 102.4 150 44.0
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 1.5e-19 99.8 151 40.4
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 5.7e-19 97.8 151 42.4
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 5.7e-19 97.8 151 42.4
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 7.4e-19 97.4 159 40.3
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 7.4e-19 97.4 152 41.4
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 3.7e-18 95.1 151 41.1
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 1.1e-17 93.6 144 40.3
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 2.0e-16 89.4 148 40.5
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 3.4e-16 88.6 137 44.5
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 2.2e-15 85.9 151 41.7
CDE10G0236 Ceratophyllum demersum HOM05D006960 ORTHO05D008699 1.4e-14 83.2 88 51.1
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 2.1e-13 79.3 151 39.1
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 1.8e-12 76.3 93 47.3
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 1.8e-12 76.3 151 37.1
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 2.0e-11 72.8 110 40.9
TAR636G2744 Trochodendron aralioides HOM05D006960 ORTHO05D008699 2.5e-11 72.4 119 41.2
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 5.7e-11 71.2 81 44.4
VMungo0964G0001 Vigna mungo HOM05D006960 ORTHO05D008699 4.8e-10 68.2 152 33.6
FAN03G0019 Fragaria x ananassa HOM05D006960 ORTHO05D008699 6.3e-10 67.8 88 45.5
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 1.1e-09 67.0 149 30.9
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 1.4e-09 66.6 148 34.5
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 3.1e-09 65.5 121 37.2


User provided reference genes

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