Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc953.1 Carica papaya HOM05D001467 ORTHO05D001447 2.7e-77 292.0 153 100.0
COL.COLO4_30894 Corchorus olitorius HOM05D001467 ORTHO05D001447 7.0e-41 171.0 125 72.0
Duzib160G0460 Durio zibethinus HOM05D001467 ORTHO05D001447 1.7e-39 166.4 139 64.0
Thecc.06G132800 Theobroma cacao HOM05D001467 ORTHO05D001447 2.9e-39 165.6 139 64.0
MBI16_g44475_MAGBIO Magnolia biondii HOM05D001467 ORTHO05D001447 1.1e-38 163.7 130 67.7
Potri.001G037300 Populus trichocarpa HOM05D001467 ORTHO05D001447 1.5e-38 163.3 132 65.2
Dinv23256 Davidia involucrata HOM05D001467 ORTHO05D001447 2.5e-38 162.5 131 66.4
Gohir.A05G142900 Gossypium hirsutum HOM05D001467 ORTHO05D001447 3.3e-38 162.2 140 62.1
Gohir.D05G145300 Gossypium hirsutum HOM05D001467 ORTHO05D001447 3.3e-38 162.2 151 58.3
Atru.chr1.2752 Acer truncatum HOM05D001467 ORTHO05D001447 4.3e-38 161.8 117 73.5
Gorai.009G149200 Gossypium raimondii HOM05D001467 ORTHO05D001447 4.3e-38 161.8 151 58.3
THA.LOC104813943 Tarenaya hassleriana HOM05D001467 ORTHO05D001447 4.3e-38 161.8 155 58.1
Cfa004165 Carpinus fangiana HOM05D001467 ORTHO05D000218 7.3e-38 161.0 128 68.8
Haze_15247 Corylus avellana HOM05D001467 ORTHO05D001447 9.5e-38 160.6 121 70.2
EL10Ac8g19451 Beta vulgaris HOM05D001467 ORTHO05D001447 2.1e-37 159.5 103 77.7
Actinidia36855 Actinidia chinensis HOM05D001467 ORTHO05D001447 2.8e-37 159.1 153 60.1
CANSAT64G0106 Cannabis sativa HOM05D001467 ORTHO05D001447 2.8e-37 159.1 128 68.8
MD09G1230800 Malus domestica HOM05D001467 ORTHO05D001447 3.6e-37 158.7 112 71.4
TWI75G1879 Tripterygium wilfordii HOM05D001467 ORTHO05D001447 3.6e-37 158.7 139 61.9
Rhsim12G0182900 Rhododendron simsii HOM05D001467 ORTHO05D001447 6.1e-37 157.9 147 61.9
Cc04_g05490 Coffea canephora HOM05D001467 ORTHO05D001447 8.0e-37 157.5 141 58.9
Manes.11G071500 Manihot esculenta HOM05D001467 ORTHO05D001447 8.0e-37 157.5 145 61.4
Hma1.2p1_0338F.1_g129610 Hydrangea macrophylla HOM05D001467 ORTHO05D001447 1.4e-36 156.8 83 90.4
Lj3g0001514 Lotus japonicus HOM05D001467 ORTHO05D001447 1.8e-36 156.4 89 83.1
Psat5g307720 Pisum sativum HOM05D001467 ORTHO05D001447 1.8e-36 156.4 120 65.0
Ca_01003_v3 Cicer arietinum L. HOM05D001467 ORTHO05D001447 3.0e-36 155.6 90 82.2
FvH4_6g27970 Fragaria vesca HOM05D001467 ORTHO05D001447 3.0e-36 155.6 114 70.2
FAN14G5604 Fragaria x ananassa HOM05D001467 ORTHO05D001447 3.0e-36 155.6 114 70.2
Medtr2g105480 Medicago truncatula HOM05D001467 ORTHO05D001447 3.0e-36 155.6 104 74.0
MSTRG.22831 Avicennia marina HOM05D001467 ORTHO05D001447 4.0e-36 155.2 97 76.3
Sed0024190 Sechium edule HOM05D001467 ORTHO05D001447 4.0e-36 155.2 152 57.9
ClCG09G003540 Citrullus lanatus HOM05D001467 ORTHO05D001447 6.8e-36 154.5 142 62.0
Ciclev10025695m.g Citrus clementina HOM05D001467 ORTHO05D001447 6.8e-36 154.5 114 69.3
Prupe.3G107000 Prunus persica HOM05D001467 ORTHO05D001447 6.8e-36 154.5 118 68.6
TAR383G1091 Trochodendron aralioides HOM05D001467 ORTHO05D001447 8.9e-36 154.1 102 72.5
CSS0004125 Camellia sinensis var. sinensis HOM05D001467 ORTHO05D001447 1.2e-35 153.7 151 57.6
CSS0033885 Camellia sinensis var. sinensis HOM05D001467 ORTHO05D001447 1.2e-35 153.7 151 57.6
Lsat_1_v5_gn_5_9161 Lactuca sativa HOM05D001467 ORTHO05D001447 1.2e-35 153.7 144 61.1
GSVIVG01016062001 Vitis vinifera HOM05D001467 ORTHO05D001447 1.2e-35 153.7 134 64.2
Migut.I00643 Erythranthe guttata HOM05D001467 ORTHO05D001447 1.5e-35 153.3 119 66.4
Phvul.005G184300 Phaseolus vulgaris HOM05D001467 ORTHO05D001447 1.5e-35 153.3 82 87.8
PGR031G3156 Punica granatum HOM05D001467 ORTHO05D001447 1.5e-35 153.3 145 58.6
Glyma.13G371900 Glycine max HOM05D001467 ORTHO05D001447 2.0e-35 152.9 82 87.8
QL93p2008_0078 Quercus lobata HOM05D001467 ORTHO05D001447 2.0e-35 152.9 87 85.1
CsaV3_7G031660 Cucumis sativus L. HOM05D001467 ORTHO05D001447 2.6e-35 152.5 123 63.4
FAN09G2518 Fragaria x ananassa HOM05D001467 ORTHO05D001447 2.6e-35 152.5 115 68.7
arahy.Tifrunner.gnm1.ann1.GBG79Z Arachis hypogaea HOM05D001467 ORTHO05D001447 3.4e-35 152.1 90 80.0
Nitab4.5_0007293g0030 Nicotiana tabacum HOM05D001467 ORTHO05D001447 3.4e-35 152.1 135 62.2
Sopen03g036770 Solanum pennellii HOM05D001467 ORTHO05D001447 3.4e-35 152.1 97 76.3
VMungo1080G1820 Vigna mungo HOM05D001467 ORTHO05D001447 3.4e-35 152.1 99 75.8
CDE05G3594 Ceratophyllum demersum HOM05D001467 ORTHO05D001447 4.4e-35 151.8 116 70.7
RcHm_v2.0_Chr2g0131521 Rosa chinensis HOM05D001467 ORTHO05D001447 4.4e-35 151.8 102 74.5
Carub.0002s1988 Capsella rubella HOM05D001467 ORTHO05D001447 5.7e-35 151.4 144 61.8
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 5.7e-35 151.4 97 76.3
FAN05G1198 Fragaria x ananassa HOM05D001467 ORTHO05D001447 7.5e-35 151.0 96 76.0
Nitab4.5_0004194g0110 Nicotiana tabacum HOM05D001467 ORTHO05D001447 7.5e-35 151.0 148 58.8
arahy.Tifrunner.gnm1.ann1.8C6B4V Arachis hypogaea HOM05D001467 ORTHO05D001447 1.7e-34 149.8 82 85.4
Solyc03g117850.4 Solanum lycopersicum HOM05D001467 ORTHO05D001447 2.2e-34 149.4 127 62.2
PSO063G0476 Papaver somniferum HOM05D001467 ORTHO05D001447 3.7e-34 148.7 133 58.6
Sp5g28070 Schrenkiella parvula HOM05D001467 ORTHO05D001447 4.9e-34 148.3 142 56.3
CAN.G1008.24 Capsicum annuum HOM05D001467 ORTHO05D001447 6.4e-34 147.9 98 74.5
Peaxi162Scf00314g00937 Petunia axillaris HOM05D001467 ORTHO05D001447 8.3e-34 147.5 97 76.3
Aa31LG4G3380 Aethionema arabicum HOM05D001467 ORTHO05D001447 1.1e-33 147.1 151 53.6
HPP92_010777 Vanilla planifolia HOM05D001467 ORTHO05D001447 1.8e-33 146.4 96 70.8
Aqoxy7G02957 Aquilegia oxysepala HOM05D001467 ORTHO05D001447 2.4e-33 146.0 96 71.9
C06p47300 Brassica napus HOM05D001467 ORTHO05D001447 2.4e-33 146.0 154 51.9
BolC6t39769H Brassica oleracea HOM05D001467 ORTHO05D001447 2.4e-33 146.0 154 51.9
AT1G73110 Arabidopsis thaliana HOM05D001467 ORTHO05D001447 3.2e-33 145.6 150 56.0
DCAR_025616 Daucus carota HOM05D001467 ORTHO05D001447 3.2e-33 145.6 82 84.1
SEGI_16259 Sequoiadendron giganteum HOM05D001467 ORTHO05D001447 3.2e-33 145.6 143 55.9
HanXRQChr08g0235911 Helianthus annuus HOM05D001467 ORTHO05D001447 4.1e-33 145.2 99 73.7
BraA07t31460Z Brassica rapa HOM05D001467 ORTHO05D001447 5.4e-33 144.8 150 52.7
ATR0580G322 Amborella trichopoda HOM05D001467 ORTHO05D001447 7.0e-33 144.4 95 73.7
A07p39090 Brassica napus HOM05D001467 ORTHO05D001447 9.2e-33 144.1 148 54.1
Os04g0658300 Oryza sativa ssp. japonica HOM05D001467 ORTHO05D001447 1.6e-32 143.3 163 52.1
SGA_v2.0_scaffold5G02826 Striga asiatica HOM05D001467 ORTHO05D001447 4.6e-32 141.7 128 60.2
AL2G32860 Arabidopsis lyrata HOM05D001467 ORTHO05D001447 5.9e-32 141.4 142 56.3
Lalb_Chr24g0392761 Lupinus albus HOM05D001467 ORTHO05D001447 5.9e-32 141.4 82 79.3
Thhalv10018573m.g Eutrema salsugineum HOM05D001467 ORTHO05D001447 2.3e-31 139.4 127 56.7
Sabra01G0026100 Salix brachista HOM05D001467 ORTHO05D001447 6.2e-29 131.3 123 56.9
Hund22384 Selenicereus undatus HOM05D001467 ORTHO05D001447 1.8e-28 129.8 169 49.1
CBR_g38065 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-28 129.0 101 61.4
AagrBONN_evm.TU.Sc2ySwM_344.1576 Anthoceros agrestis HOM05D001467 ORTHO05D001447 5.2e-28 128.3 90 66.7
SMO356G0725 Selaginella moellendorffii HOM05D001467 ORTHO05D001447 5.2e-28 128.3 79 74.7
PSO170G6584 Papaver somniferum HOM05D001467 ORTHO05D001447 2.0e-27 126.3 117 57.3
Mapoly0031s0065 Marchantia polymorpha HOM05D001467 ORTHO05D001447 7.5e-27 124.4 88 65.9
Pp3c4_22100 Physcomitrium patens HOM05D001467 ORTHO05D001447 1.3e-26 123.6 151 47.0
Thecc.06G132500 Theobroma cacao HOM05D001467 ORTHO05D001447 3.3e-22 109.0 111 60.4
CiPaw.02G024200 Carya illinoinensis HOM05D001467 ORTHO05D001447 5.6e-22 108.2 53 96.2
AUR62043543 Chenopodium quinoa HOM05D001467 ORTHO05D001447 6.2e-21 104.8 72 73.6
Eucgr.J03141 Eucalyptus grandis HOM05D001467 ORTHO05D001447 1.4e-20 103.6 53 88.7
AUR62022403 Chenopodium quinoa HOM05D001467 ORTHO05D001447 8.9e-20 100.9 74 70.3
Lj9C489T7 Lonicera japonica HOM05D001467 ORTHO05D001447 1.6e-16 90.1 110 52.7
Ah.14g085750 Amaranthus hybridus HOM05D000506 ORTHO05D000369 4.3e-14 82.0 103 49.5
Sabra03G0137300 Salix brachista HOM05D000327 ORTHO05D000218 7.3e-14 81.3 62 64.5
MCO05G437 Micromonas commoda HOM05D001467 ORTHO05D001447 1.2e-08 63.9 87 43.7
PRCOL_00005398 Prasinoderma coloniale HOM05D001467 ORTHO05D001447 5.6e-06 55.1 70 41.4


User provided reference genes

Program Settings