Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 9.3e-181 636.7 317 100.0
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 7.5e-138 494.2 292 83.6
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 2.8e-137 492.3 298 82.2
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 3.7e-137 491.9 307 79.5
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 8.3e-137 490.7 304 78.6
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 8.3e-137 490.7 292 83.2
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 4.1e-136 488.4 305 78.7
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 7.0e-136 487.6 267 87.6
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 1.7e-134 483.0 299 81.6
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 2.9e-134 482.3 279 83.9
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 3.8e-134 481.9 278 84.9
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 5.0e-134 481.5 285 83.2
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 5.0e-134 481.5 316 75.6
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 6.6e-134 481.1 307 78.8
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 6.6e-134 481.1 310 76.5
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 8.6e-134 480.7 318 77.0
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 8.6e-134 480.7 293 80.9
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 1.1e-133 480.3 279 83.5
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 1.1e-133 480.3 318 77.4
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 1.9e-133 479.6 267 85.8
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 1.9e-133 479.6 318 77.4
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 1.9e-133 479.6 274 84.7
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.9e-133 479.6 292 81.2
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 2.5e-133 479.2 318 77.0
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 2.5e-133 479.2 291 79.7
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 3.3e-133 478.8 309 75.4
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 4.3e-133 478.4 300 78.3
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 7.3e-133 477.6 318 76.4
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 1.2e-132 476.9 304 76.3
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 2.8e-132 475.7 290 79.7
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 3.6e-132 475.3 312 75.3
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 6.1e-132 474.6 290 79.3
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 1.0e-131 473.8 290 79.3
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 1.0e-131 473.8 275 84.0
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 1.4e-131 473.4 318 76.4
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 1.4e-131 473.4 303 76.9
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 1.8e-131 473.0 270 85.6
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 2.3e-131 472.6 275 82.2
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 8.9e-131 470.7 299 77.3
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 1.5e-130 469.9 273 83.5
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 1.5e-130 469.9 273 83.5
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 1.5e-130 469.9 283 80.2
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 1.5e-130 469.9 292 79.1
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 3.4e-130 468.8 291 79.0
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 4.4e-130 468.4 268 84.3
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 4.4e-130 468.4 283 81.6
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 7.5e-130 467.6 283 81.3
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 7.5e-130 467.6 262 85.1
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 7.5e-130 467.6 283 79.5
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 9.8e-130 467.2 309 76.7
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 1.3e-129 466.8 271 82.7
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 2.2e-129 466.1 262 85.1
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 6.4e-129 464.5 282 80.5
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 6.4e-129 464.5 283 79.2
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 1.4e-128 463.4 299 77.3
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 1.4e-128 463.4 276 81.2
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 1.8e-128 463.0 262 84.4
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 3.2e-128 462.2 270 82.6
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 3.2e-128 462.2 254 86.6
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 4.1e-128 461.8 291 77.7
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 5.4e-128 461.5 299 76.3
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 7.0e-128 461.1 271 81.5
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 9.2e-128 460.7 270 82.2
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 2.7e-127 459.1 270 80.7
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 7.8e-127 457.6 262 80.9
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 7.8e-127 457.6 267 81.3
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 1.7e-126 456.4 295 76.3
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 2.3e-126 456.1 301 76.4
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 2.3e-126 456.1 255 83.9
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 8.6e-126 454.1 292 76.0
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 1.5e-125 453.4 291 77.0
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 7.3e-125 451.1 292 75.0
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 7.3e-125 451.1 265 80.0
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 1.6e-124 449.9 306 72.2
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 2.1e-124 449.5 301 74.4
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 2.1e-124 449.5 305 73.4
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 2.8e-124 449.1 301 74.4
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 2.8e-124 449.1 293 74.4
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 2.8e-124 449.1 243 87.2
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 6.2e-124 448.0 286 75.9
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 1.4e-123 446.8 274 78.8
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 1.8e-123 446.4 291 75.3
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 6.8e-123 444.5 254 83.9
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 6.8e-123 444.5 251 84.1
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 2.0e-122 443.0 271 76.0
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 4.4e-122 441.8 268 78.7
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 1.7e-121 439.9 306 69.6
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 4.9e-121 438.3 243 84.4
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 4.9e-121 438.3 243 84.4
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 8.3e-121 437.6 267 76.0
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 3.2e-120 435.6 262 78.6
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 1.7e-118 429.9 243 83.5
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 2.3e-118 429.5 283 75.3
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 3.6e-116 422.2 252 80.2
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 4.7e-116 421.8 291 72.5
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 2.7e-111 406.0 321 65.4
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 4.3e-109 398.7 268 74.3
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 7.3e-109 397.9 269 69.9
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 3.2e-104 382.5 277 66.4
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 1.1e-101 374.0 265 72.5
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 1.9e-101 373.2 259 68.0
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 4.3e-101 372.1 293 61.8
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 2.8e-100 369.4 270 63.0
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 1.5e-98 363.6 233 77.7
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 3.8e-97 359.0 250 72.4
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 2.5e-93 346.3 192 87.5
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 7.3e-93 344.7 283 59.4
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 1.2e-90 337.4 192 83.3
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 2.6e-90 336.3 190 85.3
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 4.5e-90 335.5 192 82.8
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 1.1e-88 330.9 190 82.6
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 1.2e-87 327.4 222 72.1
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 1.2e-87 327.4 198 80.8
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 5.6e-85 318.5 263 60.5
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 1.8e-83 313.5 224 69.2
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 3.1e-83 312.8 264 59.5
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 2.7e-79 299.7 243 58.4
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 8.1e-76 288.1 210 70.5
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 8.2e-68 261.5 258 53.5
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 4.6e-63 245.7 162 74.7
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 2.3e-62 243.4 258 53.1
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 5.1e-62 242.3 188 66.5
CDE04G3654 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 1.6e-39 167.5 140 61.4
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis HOM05D006171 ORTHO05D007294 4.8e-36 156.0 279 38.0
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 9.1e-35 151.8 85 81.2
Cre03.g167050 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 4.2e-24 116.3 319 30.1
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 1.4e-22 111.3 65 80.0
RcHm_v2.0_Chr2g0132221 Rosa chinensis HOM05D006171 ORTHO05D007294 4.0e-22 109.8 68 72.1
PRCOL_00003410 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 4.9e-20 102.8 283 32.9
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea HOM05D006171 ORTHO05D007294 3.3e-16 90.1 104 55.8
Nn5g31109 Nelumbo nucifera HOM05D006171 ORTHO05D007294 4.7e-15 86.3 69 62.3
CARHR016590 Cardamine hirsuta HOM05D006171 ORTHO05D007294 3.1e-06 57.0 45 68.9


User provided reference genes

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