Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc95.47 Carica papaya HOM05D004893 ORTHO05D006320 9.6e-152 540.0 257 100.0
Ciclev10007405m.g Citrus clementina HOM05D004893 ORTHO05D006320 6.2e-42 175.3 130 64.6
Atru.chr7.881 Acer truncatum HOM05D004893 ORTHO05D006320 2.2e-39 166.8 132 60.6
Prupe.1G084200 Prunus persica HOM05D004893 ORTHO05D006320 1.9e-38 163.7 130 58.5
Manes.06G023100 Manihot esculenta HOM05D004893 ORTHO05D006320 2.5e-38 163.3 133 59.4
TAR627G1078 Trochodendron aralioides HOM05D004893 ORTHO05D006320 2.5e-38 163.3 133 58.6
Haze_03433 Corylus avellana HOM05D004893 ORTHO05D006320 5.5e-38 162.2 141 53.2
QL02p098221 Quercus lobata HOM05D004893 ORTHO05D006320 7.1e-38 161.8 130 60.8
Cfa010313 Carpinus fangiana HOM05D004893 ORTHO05D006320 4.6e-37 159.1 132 55.3
Cfa013310 Carpinus fangiana HOM05D004893 ORTHO05D006320 1.3e-36 157.5 132 54.5
Sabra06G0128100 Salix brachista HOM05D004893 ORTHO05D006320 1.3e-36 157.5 130 56.9
Potri.006G166500 Populus trichocarpa HOM05D004893 ORTHO05D006320 3.0e-36 156.4 130 57.7
Potri.018G091100 Populus trichocarpa HOM05D004893 ORTHO05D006320 3.9e-36 156.0 132 55.3
Hma1.2p1_0321F.1_g124570 Hydrangea macrophylla HOM05D004893 ORTHO05D006320 1.1e-35 154.5 130 56.9
Ca_21236_v3 Cicer arietinum L. HOM05D004893 ORTHO05D006320 4.3e-35 152.5 132 58.3
Duzib150G0781 Durio zibethinus HOM05D004893 ORTHO05D006320 4.3e-35 152.5 133 54.9
GSVIVG01030738001 Vitis vinifera HOM05D004893 ORTHO05D006320 9.7e-35 151.4 133 54.9
Nn7g38118 Nelumbo nucifera HOM05D004893 ORTHO05D006320 1.3e-34 151.0 133 53.4
Gohir.D05G004900 Gossypium hirsutum HOM05D004893 ORTHO05D006320 1.6e-34 150.6 133 57.1
COL.COLO4_37741 Corchorus olitorius HOM05D004893 ORTHO05D006320 2.8e-34 149.8 136 55.1
FAN12G2097 Fragaria x ananassa HOM05D004893 ORTHO05D006320 4.8e-34 149.1 131 53.4
FAN17G0276 Fragaria x ananassa HOM05D004893 ORTHO05D006320 4.8e-34 149.1 131 53.4
Gohir.A05G004264 Gossypium hirsutum HOM05D004893 ORTHO05D006320 4.8e-34 149.1 133 56.4
Gorai.009G004800 Gossypium raimondii HOM05D004893 ORTHO05D006320 6.3e-34 148.7 133 56.4
Lalb_Chr07g0180551 Lupinus albus HOM05D004893 ORTHO05D006320 8.2e-34 148.3 132 56.1
MBI02_g12652_MAGBIO Magnolia biondii HOM05D004893 ORTHO05D006320 8.2e-34 148.3 133 51.9
Psat4g012800 Pisum sativum HOM05D004893 ORTHO05D006320 8.2e-34 148.3 132 56.1
Thecc.09G175700 Theobroma cacao HOM05D004893 ORTHO05D006320 8.2e-34 148.3 133 54.1
RcHm_v2.0_Chr4g0401591 Rosa chinensis HOM05D004893 ORTHO05D006320 1.1e-33 147.9 130 56.2
FvH4_4g07920 Fragaria vesca HOM05D004893 ORTHO05D006320 1.4e-33 147.5 131 52.7
MD13G1251600 Malus domestica HOM05D004893 ORTHO05D006320 1.4e-33 147.5 130 54.6
arahy.Tifrunner.gnm1.ann1.48BVGN Arachis hypogaea HOM05D004893 ORTHO05D006320 1.8e-33 147.1 140 53.6
CSS0008978 Camellia sinensis var. sinensis HOM05D004893 ORTHO05D006320 2.4e-33 146.7 132 56.1
CSS0040034 Camellia sinensis var. sinensis HOM05D004893 ORTHO05D006320 2.4e-33 146.7 132 56.1
RcHm_v2.0_Chr4g0401691 Rosa chinensis HOM05D004893 ORTHO05D006320 4.1e-33 146.0 138 52.9
Lj8C187G7 Lonicera japonica HOM05D004893 ORTHO05D006320 1.5e-32 144.1 130 53.1
Lj4g0004814 Lotus japonicus HOM05D004893 ORTHO05D006320 2.0e-32 143.7 130 56.9
VMungo1215G1808 Vigna mungo HOM05D004893 ORTHO05D006320 3.4e-32 142.9 134 56.0
FAN22G1078 Fragaria x ananassa HOM05D004893 ORTHO05D006320 4.5e-32 142.5 132 53.0
Aqoxy3G03036 Aquilegia oxysepala HOM05D004893 ORTHO05D006320 7.6e-32 141.7 133 50.4
TWI34G0813 Tripterygium wilfordii HOM05D004893 ORTHO05D006320 7.6e-32 141.7 132 51.5
Eucgr.C02353 Eucalyptus grandis HOM05D004893 ORTHO05D006320 1.0e-31 141.4 132 56.1
vmacro21776 Vaccinium macrocarpon HOM05D004893 ORTHO05D006320 1.0e-31 141.4 142 48.6
TPR.G5437 Trifolium pratense HOM05D004893 ORTHO05D006320 2.2e-31 140.2 133 53.4
arahy.Tifrunner.gnm1.ann1.B5GTII Arachis hypogaea HOM05D004893 ORTHO05D006320 3.8e-31 139.4 139 51.1
Phvul.003G144100 Phaseolus vulgaris HOM05D004893 ORTHO05D006320 3.8e-31 139.4 130 53.8
Medtr4g127820 Medicago truncatula HOM05D004893 ORTHO05D006320 5.0e-31 139.0 130 53.8
FAN07G0898 Fragaria x ananassa HOM05D004893 ORTHO05D006320 1.1e-30 137.9 131 50.4
EL10Ac6g14738 Beta vulgaris HOM05D004893 ORTHO05D006320 1.4e-30 137.5 130 53.8
Glyma.17G062200 Glycine max HOM05D004893 ORTHO05D006320 5.5e-30 135.6 132 53.8
Glyma.13G097400 Glycine max HOM05D004893 ORTHO05D006320 1.2e-29 134.4 132 54.5
Rhsim13G0225800 Rhododendron simsii HOM05D004893 ORTHO05D006320 2.1e-29 133.7 132 51.5
Aa31LG8G15990 Aethionema arabicum HOM05D004893 ORTHO05D006320 2.7e-29 133.3 135 51.9
Thhalv10022562m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 4.6e-29 132.5 135 50.4
CANSAT11G1129 Cannabis sativa HOM05D004893 ORTHO05D006320 7.9e-29 131.7 136 55.1
ClCG06G013450 Citrullus lanatus HOM05D004893 ORTHO05D006320 7.9e-29 131.7 131 50.4
AUR62033061 Chenopodium quinoa HOM05D004893 ORTHO05D006320 1.3e-28 131.0 130 53.1
MELO3C017452.2 Cucumis melo HOM05D004893 ORTHO05D006320 1.3e-28 131.0 131 51.9
PGR044G2140 Punica granatum HOM05D004893 ORTHO05D006320 1.3e-28 131.0 140 48.6
CsaV3_1G031710 Cucumis sativus L. HOM05D004893 ORTHO05D006320 3.9e-28 129.4 131 51.9
Nitab4.5_0008437g0020 Nicotiana tabacum HOM05D004893 ORTHO05D006320 6.7e-28 128.6 132 50.8
DCAR_013745 Daucus carota HOM05D004893 ORTHO05D006320 8.7e-28 128.3 130 49.2
AUR62042215 Chenopodium quinoa HOM05D004893 ORTHO05D006320 1.9e-27 127.1 130 51.5
CANSAT11G1181 Cannabis sativa HOM05D004893 ORTHO05D006320 2.5e-27 126.7 133 51.9
Sed0012855 Sechium edule HOM05D004893 ORTHO05D006320 3.3e-27 126.3 131 48.9
PSO063G4841 Papaver somniferum HOM05D004893 ORTHO05D006320 7.4e-27 125.2 130 50.0
Sed0012025 Sechium edule HOM05D004893 ORTHO05D006320 9.7e-27 124.8 131 50.4
THA.LOC104803489 Tarenaya hassleriana HOM05D004893 ORTHO05D006320 9.7e-27 124.8 132 47.0
HanXRQChr09g0273501 Helianthus annuus HOM05D004893 ORTHO05D006320 1.6e-26 124.0 142 47.2
Nitab4.5_0001749g0080 Nicotiana tabacum HOM05D004893 ORTHO05D006320 2.8e-26 123.2 130 47.7
PSO782G3725 Papaver somniferum HOM05D004893 ORTHO05D006320 2.8e-26 123.2 130 49.2
Sp3g32370 Schrenkiella parvula HOM05D004893 ORTHO05D006320 2.8e-26 123.2 133 48.1
Carub.0003s3314 Capsella rubella HOM05D004893 ORTHO05D006320 4.8e-26 122.5 135 48.1
HPP92_012201 Vanilla planifolia HOM05D004893 ORTHO05D006320 6.3e-26 122.1 133 49.6
A07p01760 Brassica napus HOM05D004893 ORTHO05D006320 8.2e-26 121.7 135 47.4
Solyc07g066410.4 Solanum lycopersicum HOM05D004893 ORTHO05D006320 8.2e-26 121.7 134 46.3
Ah.09g231700 Amaranthus hybridus HOM05D004893 ORTHO05D006320 1.1e-25 121.3 143 51.7
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 1.1e-25 121.3 135 47.4
ECA240G4652 Erigeron canadensis HOM05D004893 ORTHO05D006320 1.4e-25 120.9 130 47.7
Migut.M01562 Erythranthe guttata HOM05D004893 ORTHO05D006320 1.8e-25 120.6 185 40.5
Sopen07g034580 Solanum pennellii HOM05D004893 ORTHO05D006320 2.4e-25 120.2 130 46.2
BcaC06g36488 Brassica carinata HOM05D004893 ORTHO05D006320 3.1e-25 119.8 135 45.9
C07p03690 Brassica napus HOM05D004893 ORTHO05D006320 3.1e-25 119.8 135 45.9
BolC7t40765H Brassica oleracea HOM05D004893 ORTHO05D006320 3.1e-25 119.8 135 45.9
Peaxi162Scf00452g00844 Petunia axillaris HOM05D004893 ORTHO05D006320 3.1e-25 119.8 143 43.4
AT2G18900 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 1.2e-24 117.9 135 46.7
BcaB03g16682 Brassica carinata HOM05D004893 ORTHO05D006320 1.2e-24 117.9 135 45.9
CARHR109460 Cardamine hirsuta HOM05D004893 ORTHO05D006320 2.6e-24 116.7 137 45.3
unitig_748.g7834 Utricularia gibba HOM05D004893 ORTHO05D006320 5.9e-24 115.5 132 46.2
MSTRG.16114 Avicennia marina HOM05D004893 ORTHO05D006320 7.7e-24 115.2 131 45.8
Os12g0609800 Oryza sativa ssp. japonica HOM05D004893 ORTHO05D006320 7.7e-24 115.2 139 46.0
Atru.chr13.1778 Acer truncatum HOM05D004893 ORTHO05D006320 1.3e-23 114.4 105 53.3
AL3G53020 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 1.3e-23 114.4 135 45.2
Cc05_g16000 Coffea canephora HOM05D004893 ORTHO05D006320 1.7e-23 114.0 131 44.3
Zm00001eb031520 Zea mays HOM05D004893 ORTHO05D006320 3.8e-23 112.8 129 48.1
SalBow8G3700 Salvia bowleyana HOM05D004893 ORTHO05D006320 1.1e-22 111.3 129 47.3
ATR1098G135 Amborella trichopoda HOM05D004893 ORTHO05D006320 3.2e-22 109.8 136 42.6
Lsat_1_v5_gn_7_72221 Lactuca sativa HOM05D004893 ORTHO05D006320 2.3e-20 103.6 134 43.3
BcaC04g22880 Brassica carinata HOM05D004893 ORTHO05D006320 6.7e-20 102.1 135 45.2
C09p14300 Brassica napus HOM05D004893 ORTHO05D006320 5.7e-19 99.0 135 44.4
BolC9t54332H Brassica oleracea HOM05D004893 ORTHO05D006320 7.4e-19 98.6 135 43.7
CDE08G1653 Ceratophyllum demersum HOM05D004893 ORTHO05D006320 7.4e-19 98.6 130 40.0
MBI12_g20565_MAGBIO Magnolia biondii HOM05D004893 ORTHO05D006320 5.5e-14 82.4 70 52.9
EL10Ac6g14737 Beta vulgaris HOM05D004893 ORTHO05D006320 4.7e-13 79.3 61 63.9
AT3G26480 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 1.0e-12 78.2 140 36.4
AL7G19230 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 1.1e-11 74.7 141 34.8
Thhalv10024453m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 2.6e-11 73.6 140 32.9
SEGI_38878 Sequoiadendron giganteum HOM05D004893 ORTHO05D006320 7.4e-11 72.0 138 29.0
BolC1t00640H Brassica oleracea HOM05D004893 ORTHO05D006320 1.7e-10 70.9 129 34.1
C01p06460 Brassica napus HOM05D004893 ORTHO05D006320 4.8e-10 69.3 129 33.3
SGA_v2.0_scaffold186G40224 Striga asiatica HOM05D004893 ORTHO05D006320 6.3e-10 68.9 130 37.7
Dinv42518 Davidia involucrata HOM05D004893 ORTHO05D006320 3.1e-09 66.6 68 45.6
Carub.0007s0802 Capsella rubella HOM05D004893 ORTHO05D006320 1.2e-08 64.7 129 33.3
Hund06466 Selenicereus undatus HOM05D004893 ORTHO05D006320 2.0e-08 63.9 58 56.9
Mapoly0156s0021 Marchantia polymorpha HOM05D004893 ORTHO05D006320 5.9e-08 62.4 136 30.1
A09p12110 Brassica napus HOM05D004893 ORTHO05D006320 2.2e-07 60.5 83 43.4
BraA09t36855Z Brassica rapa HOM05D004893 ORTHO05D006320 2.9e-07 60.1 83 42.2
BcaB07g31639 Brassica carinata HOM05D004893 ORTHO05D006320 1.1e-06 58.2 128 33.6
CBR_g49376 Chara braunii HOM05D004893 ORTHO05D006320 1.1e-06 58.2 116 29.3
Pp3c7_4120 Physcomitrium patens HOM05D004893 ORTHO05D006320 1.1e-06 58.2 113 31.0


User provided reference genes

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