Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 3.3e-84 315.1 170 100.0
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 4.0e-53 211.8 171 69.6
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 2.2e-51 206.1 173 68.2
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.9e-51 205.7 173 68.2
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 2.5e-47 192.6 186 64.5
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 4.3e-47 191.8 178 62.4
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 3.6e-46 188.7 177 63.3
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 4.7e-46 188.3 172 64.0
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 2.3e-45 186.0 171 61.4
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 3.1e-45 185.7 173 63.0
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 3.1e-45 185.7 177 61.6
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 6.8e-45 184.5 179 62.6
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 2.0e-44 183.0 171 61.4
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 4.4e-44 181.8 184 59.2
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 2.9e-43 179.1 181 63.0
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 3.7e-43 178.7 171 60.8
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 8.3e-43 177.6 186 58.6
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 8.3e-43 177.6 188 58.5
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 1.4e-42 176.8 186 59.1
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 3.2e-42 175.6 183 60.1
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 3.2e-42 175.6 176 58.0
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 3.2e-42 175.6 174 61.5
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 7.0e-42 174.5 181 55.8
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 7.0e-42 174.5 172 61.0
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.2e-41 173.7 182 55.5
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 7.8e-41 171.0 180 57.8
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 1.3e-40 170.2 174 60.9
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 5.0e-40 168.3 178 55.6
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 5.0e-40 168.3 172 59.3
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 6.6e-40 167.9 174 59.2
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 8.6e-40 167.5 129 70.5
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 1.5e-39 166.8 177 61.0
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 2.5e-39 166.0 173 60.1
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 2.5e-39 166.0 173 59.5
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 2.5e-39 166.0 172 58.7
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 4.3e-39 165.2 171 59.6
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 4.3e-39 165.2 185 54.6
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 1.2e-38 163.7 184 56.5
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 1.6e-38 163.3 173 59.5
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 2.8e-38 162.5 170 58.8
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 3.6e-38 162.2 170 57.6
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 3.6e-38 162.2 173 56.6
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 1.8e-37 159.8 173 57.8
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 5.2e-37 158.3 171 57.3
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 8.9e-37 157.5 173 56.1
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.2e-36 157.1 181 54.1
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.2e-36 157.1 131 63.4
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 1.2e-36 157.1 119 70.6
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 2.0e-36 156.4 182 54.9
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 7.5e-36 154.5 176 52.3
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 9.2e-34 147.5 136 62.5
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 1.2e-33 147.1 183 53.6
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 2.1e-33 146.4 130 56.9
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 2.7e-33 146.0 182 50.0
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 1.0e-32 144.1 126 58.7
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 1.1e-31 140.6 121 66.1
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 1.1e-31 140.6 169 48.5
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 1.1e-31 140.6 169 48.5
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 1.1e-31 140.6 169 48.5
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 1.1e-31 140.6 146 54.1
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 1.5e-31 140.2 126 57.9
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 1.5e-31 140.2 140 55.0
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 3.3e-31 139.0 136 59.6
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 3.3e-31 139.0 181 49.2
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 4.3e-31 138.7 126 57.1
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 4.3e-31 138.7 189 48.1
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 5.6e-31 138.3 115 67.8
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 7.3e-31 137.9 132 55.3
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 7.3e-31 137.9 132 55.3
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 7.3e-31 137.9 132 55.3
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.2e-30 137.1 180 50.6
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 1.1e-29 134.0 120 63.3
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 1.8e-29 133.3 171 46.8
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 2.3e-29 132.9 151 53.0
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 1.2e-28 130.6 173 49.1
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 2.0e-28 129.8 181 50.3
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.3e-27 127.1 185 47.0
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 1.1e-26 124.0 172 50.6
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 1.1e-26 124.0 195 45.6
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 1.9e-26 123.2 171 46.8
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 1.9e-26 123.2 173 48.6
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 4.1e-26 122.1 185 48.6
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 5.4e-26 121.7 174 48.9
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 7.1e-26 121.3 184 46.2
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 8.6e-24 114.4 172 46.5
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 1.5e-23 113.6 183 43.7
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.1e-21 105.9 182 44.0
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 4.4e-20 102.1 172 44.2
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 7.6e-20 101.3 146 45.9
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 9.9e-20 100.9 151 45.0
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 2.2e-19 99.8 121 47.9
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 4.9e-19 98.6 187 41.7
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.2e-18 95.9 183 41.5
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 1.6e-17 93.6 185 41.6
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 2.7e-17 92.8 181 40.3
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 2.3e-16 89.7 182 40.1
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.6e-14 82.4 184 38.6
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 1.1e-13 80.9 173 41.0
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 1.2e-12 77.4 102 52.0
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.8e-11 72.4 140 40.7
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 8.4e-11 71.2 176 35.2
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 2.3e-08 63.2 176 33.5
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 3.0e-08 62.8 123 38.2
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 1.1e-07 60.8 172 35.5
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 1.1e-07 60.8 72 47.2
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 5.6e-07 58.5 79 55.7
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 2.8e-06 56.2 196 30.1


User provided reference genes

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