Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 2.9e-116 422.2 251 100.0
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 3.0e-73 279.3 249 60.6
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 3.0e-73 279.3 249 60.6
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 3.7e-71 272.3 251 61.4
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 5.3e-70 268.5 251 58.6
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 3.8e-68 262.3 249 59.0
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 3.8e-68 262.3 250 59.6
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 2.5e-67 259.6 244 57.8
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 9.3e-67 257.7 251 59.4
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 9.3e-67 257.7 250 58.4
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 4.6e-66 255.4 249 57.0
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.3e-65 253.8 244 55.7
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 3.0e-65 252.7 243 57.6
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 3.0e-65 252.7 244 57.4
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 3.9e-65 252.3 251 56.2
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 6.7e-65 251.5 251 55.4
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 2.5e-64 249.6 245 59.2
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 2.2e-63 246.5 244 55.7
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 8.2e-63 244.6 247 55.9
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 2.4e-62 243.0 244 54.5
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 3.1e-62 242.7 247 56.3
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 3.1e-62 242.7 247 55.9
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 4.1e-62 242.3 247 56.3
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 5.3e-62 241.9 247 56.3
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 5.3e-62 241.9 246 54.5
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 1.2e-61 240.7 247 55.5
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 1.2e-61 240.7 247 56.7
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 5.0e-60 235.3 251 53.4
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 1.1e-59 234.2 251 55.8
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 1.6e-58 230.3 247 55.1
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 2.7e-58 229.6 265 51.7
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 3.6e-58 229.2 250 49.6
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 1.0e-57 227.6 249 51.8
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 1.4e-57 227.3 244 53.3
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 3.0e-57 226.1 250 55.2
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 5.1e-57 225.3 250 54.8
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 6.7e-57 224.9 249 52.6
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.1e-56 224.2 246 50.4
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 1.7e-55 220.3 245 51.0
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 2.8e-55 219.5 246 49.2
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 6.3e-55 218.4 249 50.6
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 8.2e-55 218.0 270 48.1
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 1.1e-54 217.6 245 49.8
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 1.8e-54 216.9 224 54.0
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 1.8e-54 216.9 249 48.2
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 2.4e-54 216.5 247 50.6
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 3.1e-54 216.1 251 51.8
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 4.1e-54 215.7 251 50.6
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 4.1e-54 215.7 245 50.6
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 3.4e-53 212.6 249 49.8
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 6.5e-52 208.4 238 50.8
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 8.5e-52 208.0 250 49.6
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 1.9e-51 206.8 245 51.4
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 9.4e-51 204.5 244 48.8
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.6e-50 203.8 214 52.3
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 2.1e-50 203.4 227 50.7
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 4.7e-50 202.2 251 49.4
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 7.9e-50 201.4 250 50.4
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 7.9e-50 201.4 295 43.1
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 3.9e-49 199.1 245 46.5
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 8.8e-49 198.0 227 49.8
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 1.1e-48 197.6 195 56.9
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 1.5e-48 197.2 258 48.1
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 3.3e-48 196.1 247 49.0
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 2.8e-47 193.0 244 46.7
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 3.1e-46 189.5 188 55.9
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 9.1e-46 188.0 240 45.4
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 4.5e-45 185.7 259 45.6
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 1.7e-44 183.7 250 44.4
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 2.0e-40 170.2 264 45.5
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 1.3e-39 167.5 245 41.2
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 3.1e-38 162.9 233 44.6
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 5.9e-37 158.7 195 49.2
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 5.9e-37 158.7 271 39.9
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 2.2e-36 156.8 198 48.0
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 3.8e-36 156.0 126 65.1
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 5.0e-36 155.6 245 39.6
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.5e-32 144.1 251 38.6
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 2.0e-32 143.7 251 39.4
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 4.5e-29 132.5 251 36.7
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 7.2e-27 125.2 126 51.6
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 1.6e-26 124.0 251 35.9
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 8.0e-26 121.7 127 55.9
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 1.2e-24 117.9 142 47.2
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.5e-24 117.5 235 35.7
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 1.5e-24 117.5 146 47.9
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 2.7e-21 106.7 132 45.5
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 4.3e-19 99.4 121 49.6
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 5.6e-19 99.0 121 44.6
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 2.1e-18 97.1 147 40.8
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 4.9e-15 85.9 101 51.5
TWI63G1298 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 8.3e-15 85.1 108 48.1
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 1.7e-12 77.4 243 26.7
vmacro20809 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 4.3e-11 72.8 55 63.6
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 2.1e-10 70.5 259 24.7
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 8.9e-09 65.1 64 48.4
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 8.9e-09 65.1 60 56.7
Actinidia07549 Actinidia chinensis HOM05D007474 ORTHO05D009367 3.7e-07 59.7 45 64.4
arahy.Tifrunner.gnm1.ann1.J5XFRX Arachis hypogaea HOM05D011742 ORTHO05D014450 1.9e-06 57.4 55 52.7
Eucgr.C00104 Eucalyptus grandis HOM05D007474 ORTHO05D009367 4.1e-06 56.2 57 50.9
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 4.1e-06 56.2 93 39.8
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 5.4e-06 55.8 46 60.9


User provided reference genes

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