Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc939.2 Carica papaya HOM05D000536 ORTHO05D001213 1.1e-51 206.5 109 100.0
Duzib205G1168 Durio zibethinus HOM05D000536 ORTHO05D001213 3.6e-15 85.1 129 49.6
Duzib084G0493 Durio zibethinus HOM05D000536 ORTHO05D001213 8.0e-15 84.0 133 48.9
Gohir.D12G177400 Gossypium hirsutum HOM05D000536 ORTHO05D001213 8.0e-15 84.0 134 45.5
Gorai.008G189800 Gossypium raimondii HOM05D000536 ORTHO05D001213 8.0e-15 84.0 134 45.5
Gohir.A12G174700 Gossypium hirsutum HOM05D000536 ORTHO05D001213 6.8e-14 80.9 136 44.1
Duzib068G1309 Durio zibethinus HOM05D000536 ORTHO05D001213 2.0e-13 79.3 123 48.0
Thecc.K0000600 Theobroma cacao HOM05D000536 ORTHO05D001213 2.0e-13 79.3 126 49.2
Ciclev10021550m.g Citrus clementina HOM05D000536 ORTHO05D001213 2.6e-13 79.0 138 43.5
COL.COLO4_21257 Corchorus olitorius HOM05D000536 ORTHO05D001213 2.4e-11 72.4 80 56.2
Manes.02G197600 Manihot esculenta HOM05D000536 ORTHO05D001213 9.2e-11 70.5 144 37.5
Atru.chr9.2361 Acer truncatum HOM05D000536 ORTHO05D001213 1.2e-10 70.1 133 42.1
CiPaw.11G034900 Carya illinoinensis HOM05D000536 ORTHO05D001213 1.3e-09 66.6 97 42.3
MSTRG.23068 Avicennia marina HOM05D000536 ORTHO05D001213 5.0e-09 64.7 74 51.4
MD06G1184500 Malus domestica HOM05D000536 ORTHO05D001213 6.6e-09 64.3 41 73.2
MD14G1190400 Malus domestica HOM05D000536 ORTHO05D001213 6.6e-09 64.3 129 41.9
PGR083G1234 Punica granatum HOM05D000536 ORTHO05D001213 6.6e-09 64.3 41 70.7
PGR083G1936 Punica granatum HOM05D000536 ORTHO05D001213 6.6e-09 64.3 41 70.7
QL10p014469 Quercus lobata HOM05D000536 ORTHO05D001213 2.5e-08 62.4 140 35.0
Dinv19896 Davidia involucrata HOM05D000536 ORTHO05D001213 3.3e-08 62.0 129 38.8
Potri.015G067800 Populus trichocarpa HOM05D000536 ORTHO05D001213 5.6e-08 61.2 161 34.8
Lj4g0008428 Lotus japonicus HOM05D000536 ORTHO05D001213 7.3e-08 60.8 125 38.4
GSVIVG01008092001 Vitis vinifera HOM05D000536 ORTHO05D001213 9.5e-08 60.5 40 72.5
Cfa019029 Carpinus fangiana HOM05D000536 ORTHO05D001213 1.6e-07 59.7 135 38.5
Haze_07404 Corylus avellana HOM05D000536 ORTHO05D001213 2.1e-07 59.3 135 38.5
Sabra15G0092700 Salix brachista HOM05D000536 ORTHO05D001213 2.8e-07 58.9 148 35.1
SalBow5G0983 Salvia bowleyana HOM05D000536 ORTHO05D001213 3.6e-07 58.5 41 63.4
CSS0038761 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 4.7e-07 58.2 42 59.5
SGA_v2.0_scaffold56G20077 Striga asiatica HOM05D000536 ORTHO05D001213 4.7e-07 58.2 96 42.7
TWI60G1120 Tripterygium wilfordii HOM05D000536 ORTHO05D001213 4.7e-07 58.2 114 41.2
Glyma.17G095200 Glycine max HOM05D000536 ORTHO05D001213 8.0e-07 57.4 41 63.4
Eucgr.B00387 Eucalyptus grandis HOM05D000536 ORTHO05D001213 1.1e-06 57.0 39 61.5
MSTRG.11412 Avicennia marina HOM05D000536 ORTHO05D001213 1.4e-06 56.6 97 43.3
ClCG06G016540 Citrullus lanatus HOM05D000536 ORTHO05D001213 1.4e-06 56.6 103 39.8
TAR371G0401 Trochodendron aralioides HOM05D000536 ORTHO05D001213 1.8e-06 56.2 117 31.6
arahy.Tifrunner.gnm1.ann1.MWX564 Arachis hypogaea HOM05D000536 ORTHO05D001213 2.3e-06 55.8 43 60.5
arahy.Tifrunner.gnm1.ann1.YF22WB Arachis hypogaea HOM05D000536 ORTHO05D001213 2.3e-06 55.8 43 60.5
Ca_21866_v3 Cicer arietinum L. HOM05D000536 ORTHO05D001213 2.3e-06 55.8 104 36.5
Psat4g054520 Pisum sativum HOM05D000536 ORTHO05D001213 2.3e-06 55.8 55 50.9
Rhsim12G0160400 Rhododendron simsii HOM05D000536 ORTHO05D001213 2.3e-06 55.8 41 63.4
CsaV3_1G001970 Cucumis sativus L. HOM05D000536 ORTHO05D001213 3.1e-06 55.5 85 40.0
vmacro16577 Vaccinium macrocarpon HOM05D000536 ORTHO05D001213 3.1e-06 55.5 104 34.6
MELO3C002224.2 Cucumis melo HOM05D000536 ORTHO05D001213 4.0e-06 55.1 42 61.9
CsaV3_1G008070 Cucumis sativus L. HOM05D000536 ORTHO05D001213 4.0e-06 55.1 42 61.9
Lalb_Chr13g0298071 Lupinus albus HOM05D000536 ORTHO05D001213 5.2e-06 54.7 131 32.1
Phvul.003G195000 Phaseolus vulgaris HOM05D000536 ORTHO05D001213 6.8e-06 54.3 58 50.0
VMungo1215G1921 Vigna mungo HOM05D000536 ORTHO05D001213 6.8e-06 54.3 68 45.6
MELO3C017141.2 Cucumis melo HOM05D000536 ORTHO05D001213 8.9e-06 53.9 85 37.6


User provided reference genes

Program Settings