Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 0.0e+00 1099.7 579 100.0
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 3.8e-63 246.9 637 34.4
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 8.5e-55 219.2 654 33.0
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 6.1e-53 213.0 666 33.0
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 4.2e-46 190.3 643 29.9
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 6.1e-45 186.4 625 30.7
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.7e-42 178.3 622 30.2
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.8e-42 177.6 600 30.8
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 8.2e-42 176.0 566 30.7
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.1e-41 175.6 619 28.9
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.5e-38 165.2 734 28.3
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.5e-38 163.3 625 31.0
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 4.0e-36 157.1 624 30.9
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 4.4e-35 153.7 600 29.3
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.5e-35 152.9 611 30.4
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 3.7e-34 150.6 590 29.7
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.2e-32 145.6 611 29.6
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 7.7e-32 142.9 359 35.7
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.1e-30 139.0 624 28.8
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.5e-30 138.7 623 28.1
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 2.5e-30 137.9 590 27.1
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 1.0e-28 132.5 523 28.9
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.0e-27 128.3 567 27.9
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 4.4e-27 127.1 526 27.4
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 4.4e-27 127.1 701 25.8
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 4.4e-27 127.1 624 26.9
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 7.5e-27 126.3 629 28.8
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 5.4e-25 120.2 439 32.8
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 5.4e-25 120.2 629 24.6
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 5.4e-25 120.2 626 26.8
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 9.2e-25 119.4 581 27.0
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.7e-24 117.9 728 24.2
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 7.8e-24 116.3 653 26.5
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.0e-23 115.9 558 27.6
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.0e-23 115.9 632 26.4
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 5.0e-23 113.6 600 26.0
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.9e-22 111.7 485 26.6
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 1.9e-22 111.7 577 27.9
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 2.5e-22 111.3 648 26.7
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 3.3e-22 110.9 568 25.2
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 5.6e-22 110.2 665 26.3
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.6e-22 110.2 631 26.1
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-21 109.0 137 49.6
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 8.0e-21 106.3 588 25.5
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 8.0e-21 106.3 652 24.1
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 1.0e-20 105.9 557 26.6
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.0e-20 105.9 517 24.2
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.4e-20 105.5 439 27.6
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.8e-20 105.1 772 24.1
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.3e-20 104.8 634 26.3
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 5.2e-20 103.6 578 27.0
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 8.9e-20 102.8 137 47.4
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 8.9e-20 102.8 137 47.4
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.2e-19 102.4 560 25.7
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.2e-19 102.4 611 24.1
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.6e-19 101.3 728 23.6
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 5.7e-19 100.1 559 25.9
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.9e-18 97.8 472 28.2
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 3.7e-18 97.4 601 25.8
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 8.3e-18 96.3 539 25.8
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 2.4e-17 94.7 563 27.2
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 7.0e-17 93.2 569 25.5
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 1.2e-16 92.4 344 27.6
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 1.6e-16 92.0 586 26.3
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 2.0e-16 91.7 594 25.6
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 2.3e-15 88.2 508 26.2
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.3e-15 88.2 124 47.6
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 8.6e-15 86.3 627 23.8
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-14 85.1 591 24.4
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 7.3e-14 83.2 577 25.5
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 2.1e-13 81.6 597 24.6
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 3.6e-13 80.9 134 40.3
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 1.4e-12 79.0 415 28.4
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 1.8e-12 78.6 181 38.1
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 3.1e-12 77.8 598 25.1
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 1.5e-11 75.5 165 30.3
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 1.5e-11 75.5 348 27.6
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 2.0e-11 75.1 415 28.0
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 4.4e-11 73.9 116 44.0
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 2.9e-10 71.2 513 24.6
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 6.4e-10 70.1 144 36.8
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 6.4e-10 70.1 126 41.3
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.9e-09 68.6 318 27.7
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 3.2e-09 67.8 454 26.9
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 9.2e-09 66.2 605 24.0
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 4.6e-08 63.9 150 34.7
Aa31LG3G12750 Aethionema arabicum HOM05D006771 ORTHO05D008296 7.8e-08 63.2 464 24.4
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.0e-07 62.8 451 23.9
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.3e-07 62.4 122 36.1
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.3e-07 62.4 447 23.5
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.1e-06 59.3 673 21.2
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.1e-06 59.3 330 26.7
Lalb_Chr08g0232041 Lupinus albus HOM05D006771 ORTHO05D008296 1.5e-06 58.9 178 29.2
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 9.5e-06 56.2 626 23.3


User provided reference genes

Program Settings