Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 1.3e-271 939.1 472 100.0
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 6.0e-67 259.2 187 69.0
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 5.6e-65 252.7 187 69.0
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 5.6e-65 252.7 187 68.4
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 3.7e-64 250.0 187 67.4
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 4.0e-63 246.5 184 65.2
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 5.8e-62 242.7 173 65.9
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 4.6e-59 233.0 186 60.2
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 6.0e-59 232.6 191 61.3
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 7.9e-59 232.3 184 63.6
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 6.7e-58 229.2 181 60.8
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 1.1e-57 228.4 189 60.3
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 1.9e-57 227.6 187 59.9
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 3.3e-57 226.9 173 64.2
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 9.7e-57 225.3 184 59.2
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 1.6e-56 224.6 187 58.8
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 4.8e-56 223.0 188 59.6
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 1.1e-55 221.9 188 61.2
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 1.8e-55 221.1 188 58.5
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 9.0e-55 218.8 172 61.6
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 9.0e-55 218.8 184 61.4
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 3.4e-54 216.9 182 58.8
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 4.5e-54 216.5 190 58.4
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 5.9e-54 216.1 187 57.2
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 1.3e-53 214.9 188 56.9
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 1.3e-53 214.9 188 56.9
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 1.7e-53 214.5 184 60.3
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 2.9e-53 213.8 171 60.2
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 6.5e-53 212.6 187 55.6
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 6.5e-53 212.6 187 56.1
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 1.1e-52 211.8 191 55.5
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 2.5e-52 210.7 192 55.7
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 4.6e-51 206.5 171 57.9
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 1.8e-50 204.5 184 56.0
COL.COLO4_28165 Corchorus olitorius HOM05D005711 ORTHO05D007125 1.8e-50 204.5 158 66.5
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 2.3e-50 204.1 186 56.5
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 3.0e-50 203.8 192 53.1
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 6.7e-50 202.6 192 52.6
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 8.8e-50 202.2 184 53.8
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 2.0e-49 201.1 192 52.1
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.0e-49 201.1 180 53.9
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 4.3e-49 199.9 180 53.3
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 1.3e-48 198.4 172 56.4
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 6.3e-48 196.1 191 53.4
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 8.2e-48 195.7 184 51.6
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 1.1e-47 195.3 192 52.1
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 1.4e-47 194.9 189 52.9
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 1.4e-47 194.9 174 54.0
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 1.4e-47 194.9 184 52.2
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 1.8e-47 194.5 184 52.2
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 5.3e-47 193.0 184 50.5
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 2.6e-46 190.7 184 54.9
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 2.6e-46 190.7 173 50.3
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 7.7e-46 189.1 184 53.3
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 1.3e-45 188.3 228 45.6
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 3.8e-45 186.8 165 58.2
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 1.4e-44 184.9 196 52.6
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 1.9e-44 184.5 183 51.4
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 1.9e-44 184.5 169 49.7
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 9.4e-44 182.2 268 42.9
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 1.4e-42 178.3 177 50.8
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 2.3e-42 177.6 268 41.8
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 2.3e-42 177.6 203 45.8
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 3.0e-42 177.2 190 48.9
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 1.1e-41 175.3 177 49.7
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 1.1e-41 175.3 185 50.8
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 1.5e-41 174.9 130 62.3
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 1.5e-41 174.9 179 50.3
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 5.7e-41 172.9 176 49.4
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 1.7e-40 171.4 184 48.9
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 2.2e-40 171.0 195 47.2
Cpa.g.sc7.232 Carica papaya HOM05D008736 ORTHO05D010193 1.8e-39 167.9 221 44.3
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 2.4e-39 167.5 184 46.2
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 4.1e-39 166.8 192 48.4
Cpa.g.sc66.107 Carica papaya HOM05D008736 ORTHO05D010193 7.0e-39 166.0 248 39.5
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 1.2e-38 165.2 177 45.8
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 1.5e-38 164.9 176 46.0
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.5e-38 164.9 220 40.5
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 2.6e-38 164.1 184 47.3
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 7.7e-38 162.5 174 50.6
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.3e-37 161.8 184 47.8
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 2.2e-37 161.0 172 47.1
Cpa.g.c39278 Carica papaya HOM05D008736 ORTHO05D010193 2.9e-37 160.6 179 43.0
Cpa.g.sc63.45 Carica papaya HOM05D008736 ORTHO05D010193 9.4e-36 155.6 154 47.4
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 4.7e-35 153.3 195 43.1
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 1.4e-34 151.8 195 42.6
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 2.8e-32 144.1 163 47.9
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 2.4e-31 141.0 129 50.4
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 5.3e-31 139.8 101 60.4
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.6e-30 138.3 137 50.4
Cpa.g.sc34.7 Carica papaya HOM05D008736 ORTHO05D010193 2.0e-30 137.9 102 58.8
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 7.7e-30 136.0 137 49.6
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 8.0e-27 125.9 182 37.9
Cpa.g.sc91.74 Carica papaya HOM05D008736 ORTHO05D010193 2.0e-25 121.3 123 43.9
Cpa.g.sc51.151 Carica papaya HOM05D001543 ORTHO05D010193 1.7e-24 118.2 112 49.1
FvH4_7g07943 Fragaria vesca HOM05D005711 ORTHO05D007125 3.1e-23 114.0 116 48.3
FAN10G0844 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.1e-23 114.0 116 48.3
FAN06G4049 Fragaria x ananassa HOM05D005711 ORTHO05D007125 5.3e-23 113.2 116 48.3
Cpa.g.c40023.1 Carica papaya HOM05D008736 ORTHO05D010193 2.1e-19 101.3 145 38.6
Cpa.g.c40706 Carica papaya HOM05D008736 ORTHO05D010193 4.7e-19 100.1 166 35.5
Cpa.g.sc114.32 Carica papaya HOM05D008736 ORTHO05D010193 3.0e-18 97.4 94 44.7
Rhsim03G0016400 Rhododendron simsii HOM05D005711 ORTHO05D007125 5.2e-18 96.7 87 54.0
Cpa.g.sc94.67 Carica papaya HOM05D008736 ORTHO05D010193 2.4e-15 87.8 76 52.6
Cpa.g.sc88.11 Carica papaya HOM05D008736 ORTHO05D010193 4.1e-15 87.0 58 58.6
Cpa.g.c44697.1 Carica papaya HOM05D008736 ORTHO05D010193 6.6e-13 79.7 80 41.2
Cpa.g.sc245.14 Carica papaya HOM05D008736 ORTHO05D010193 1.5e-12 78.6 273 25.3
Cpa.g.sc33.115 Carica papaya HOM05D008736 ORTHO05D010193 2.5e-12 77.8 118 39.8
Cpa.g.sc51.39 Carica papaya HOM05D016174 ORTHO05D010193 4.7e-11 73.6 150 32.0
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 8.0e-11 72.8 214 27.6
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 8.0e-11 72.8 172 32.0
Cpa.g.sc10.110 Carica papaya HOM05D008736 ORTHO05D010193 1.8e-10 71.6 163 27.0
Cpa.g.sc31.44 Carica papaya HOM05D008736 ORTHO05D010193 3.0e-10 70.9 88 43.2
Cpa.g.sc32.153 Carica papaya HOM05D008736 ORTHO05D010193 6.8e-10 69.7 95 31.6
Cpa.g.sc74.30 Carica papaya HOM05D000003 ORTHO05D000006 4.4e-09 67.0 123 35.8
Cpa.g.sc40.8 Carica papaya HOM05D008736 ORTHO05D010193 9.8e-09 65.9 81 32.1
Cpa.g.sc20.217 Carica papaya HOM05D000564 ORTHO05D010193 1.3e-08 65.5 100 33.0
Cpa.g.sc462.4 Carica papaya HOM05D000555 ORTHO05D010193 1.7e-08 65.1 90 32.2
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 6.3e-08 63.2 167 26.9
Cpa.g.sc79.14 Carica papaya HOM05D008736 ORTHO05D010193 2.4e-07 61.2 76 32.9
Cpa.g.sc7.173 Carica papaya HOM05D008736 ORTHO05D010193 3.2e-07 60.8 105 34.3
FAN04G1389 Fragaria x ananassa HOM05D005711 ORTHO05D007125 7.0e-07 59.7 49 53.1
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 7.0e-07 59.7 148 26.4
Cpa.g.sc84.98 Carica papaya HOM05D016174 ORTHO05D010193 1.6e-06 58.5 108 34.3
Cpa.g.sc25.168 Carica papaya HOM05D008736 ORTHO05D010193 2.7e-06 57.8 140 22.1
Cpa.g.sc9.385 Carica papaya HOM05D008736 ORTHO05D010193 3.5e-06 57.4 96 30.2
Cpa.g.sc13.16 Carica papaya HOM05D050396 ORTHO05D118122 4.5e-06 57.0 64 35.9
Cpa.g.sc94.68 Carica papaya HOM05D010178 ORTHO05D000006 7.8e-06 56.2 138 31.9


User provided reference genes

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