Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc91.8 Carica papaya HOM05D003461 ORTHO05D004386 7.6e-88 327.0 152 100.0
FAN20G1067 Fragaria x ananassa HOM05D003461 ORTHO05D004386 2.5e-22 109.4 54 88.9
FAN27G2808 Fragaria x ananassa HOM05D003461 ORTHO05D004386 2.5e-22 109.4 57 86.0
Sabra18G0035400 Salix brachista HOM05D003461 ORTHO05D004386 3.2e-22 109.0 66 77.3
Potri.018G034700 Populus trichocarpa HOM05D003461 ORTHO05D004386 4.2e-22 108.6 50 94.0
FvH4_2g30180 Fragaria vesca HOM05D003461 ORTHO05D004386 5.5e-22 108.2 54 87.0
FAN15G0070 Fragaria x ananassa HOM05D003461 ORTHO05D004386 5.5e-22 108.2 54 87.0
MD08G1135800 Malus domestica HOM05D003461 ORTHO05D004386 7.2e-22 107.8 54 87.0
Prupe.1G466400 Prunus persica HOM05D003461 ORTHO05D004386 7.2e-22 107.8 54 87.0
RcHm_v2.0_Chr6g0312731 Rosa chinensis HOM05D003461 ORTHO05D004386 7.2e-22 107.8 54 87.0
TWI34G1710 Tripterygium wilfordii HOM05D003461 ORTHO05D004386 9.5e-22 107.5 50 92.0
Atru.chr7.2323 Acer truncatum HOM05D003461 ORTHO05D004386 2.8e-21 105.9 50 90.0
Ah.12g063310 Amaranthus hybridus HOM05D003461 ORTHO05D004386 2.8e-21 105.9 54 83.3
EL10Ac2g02534 Beta vulgaris HOM05D003461 ORTHO05D004386 2.8e-21 105.9 50 90.0
Ciclev10007226m.g Citrus clementina HOM05D003461 ORTHO05D004386 2.8e-21 105.9 54 85.2
CSS0003133 Camellia sinensis var. sinensis HOM05D003461 ORTHO05D004386 3.6e-21 105.5 50 90.0
Actinidia14640 Actinidia chinensis HOM05D003461 ORTHO05D004386 4.7e-21 105.1 54 85.2
COL.COLO4_24068 Corchorus olitorius HOM05D003461 ORTHO05D004386 4.7e-21 105.1 54 85.2
Haze_21625 Corylus avellana HOM05D003461 ORTHO05D004386 6.1e-21 104.8 54 83.3
Dinv30215 Davidia involucrata HOM05D003461 ORTHO05D004386 6.1e-21 104.8 47 95.7
Duzib168G0147 Durio zibethinus HOM05D003461 ORTHO05D004386 6.1e-21 104.8 54 83.3
Manes.13G069700 Manihot esculenta HOM05D003461 ORTHO05D004386 6.1e-21 104.8 51 88.2
THA.LOC104819890 Tarenaya hassleriana HOM05D003461 ORTHO05D004386 8.0e-21 104.4 51 88.2
FAN24G1347 Fragaria x ananassa HOM05D003461 ORTHO05D004386 1.0e-20 104.0 51 88.2
Duzib150G1527 Durio zibethinus HOM05D003461 ORTHO05D004386 1.8e-20 103.2 50 86.0
Gohir.D06G048151 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.8e-20 103.2 50 88.0
Gorai.010G053900 Gossypium raimondii HOM05D003461 ORTHO05D004386 1.8e-20 103.2 50 88.0
AUR62011223 Chenopodium quinoa HOM05D003461 ORTHO05D004386 2.3e-20 102.8 60 73.3
Glyma.14G129500 Glycine max HOM05D003461 ORTHO05D004386 2.3e-20 102.8 51 88.2
Glyma.17G204000 Glycine max HOM05D003461 ORTHO05D004386 2.3e-20 102.8 51 88.2
MD15G1115000 Malus domestica HOM05D003461 ORTHO05D004386 2.3e-20 102.8 51 86.3
Phvul.001G055800 Phaseolus vulgaris HOM05D003461 ORTHO05D004386 2.3e-20 102.8 51 88.2
arahy.Tifrunner.gnm1.ann1.3VS957 Arachis hypogaea HOM05D003461 ORTHO05D004386 4.0e-20 102.1 59 78.0
arahy.Tifrunner.gnm1.ann1.4R6GA4 Arachis hypogaea HOM05D003461 ORTHO05D004386 4.0e-20 102.1 59 78.0
Gorai.009G011800 Gossypium raimondii HOM05D003461 ORTHO05D004386 4.0e-20 102.1 54 85.2
Thecc.09G143900 Theobroma cacao HOM05D003461 ORTHO05D004386 4.0e-20 102.1 50 86.0
vmacro05447 Vaccinium macrocarpon HOM05D003461 ORTHO05D004386 5.2e-20 101.7 54 85.2
Actinidia15711 Actinidia chinensis HOM05D003461 ORTHO05D004386 8.8e-20 100.9 54 83.3
AUR62024833 Chenopodium quinoa HOM05D003461 ORTHO05D004386 8.8e-20 100.9 50 84.0
AUR62032384 Chenopodium quinoa HOM05D003461 ORTHO05D004386 8.8e-20 100.9 50 84.0
Gohir.A06G048100 Gossypium hirsutum HOM05D003461 ORTHO05D004386 8.8e-20 100.9 50 86.0
Lalb_Chr11g0063991 Lupinus albus HOM05D003461 ORTHO05D004386 8.8e-20 100.9 59 76.3
Psat6g031040 Pisum sativum HOM05D003461 ORTHO05D004386 8.8e-20 100.9 51 86.3
AT2G25660 Arabidopsis thaliana HOM05D003461 ORTHO05D004386 1.2e-19 100.5 51 86.3
Carub.0004s0545 Capsella rubella HOM05D003461 ORTHO05D004386 1.2e-19 100.5 51 86.3
Gohir.A05G010700 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.2e-19 100.5 54 83.3
Gohir.D05G011400 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.2e-19 100.5 54 83.3
PGR044G2079 Punica granatum HOM05D003461 ORTHO05D004386 2.0e-19 99.8 51 88.2
Sp4g05280 Schrenkiella parvula HOM05D003461 ORTHO05D004386 2.0e-19 99.8 51 86.3
Oeu019417.3 Olea europaea HOM05D003461 ORTHO05D004386 2.6e-19 99.4 51 82.4
TAR383G0906 Trochodendron aralioides HOM05D003461 ORTHO05D004386 2.6e-19 99.4 51 84.3
AL4G17260 Arabidopsis lyrata HOM05D003461 ORTHO05D004386 3.4e-19 99.0 51 84.3
BcaC02g08333 Brassica carinata HOM05D003461 ORTHO05D004386 3.4e-19 99.0 51 84.3
A04p19870 Brassica napus HOM05D003461 ORTHO05D004386 3.4e-19 99.0 51 84.3
C04p55600 Brassica napus HOM05D003461 ORTHO05D004386 3.4e-19 99.0 51 84.3
BolC4t27084H Brassica oleracea HOM05D003461 ORTHO05D004386 3.4e-19 99.0 51 84.3
BraA04t17575Z Brassica rapa HOM05D003461 ORTHO05D004386 3.4e-19 99.0 51 84.3
Dinv35880 Davidia involucrata HOM05D003461 ORTHO05D004386 3.4e-19 99.0 50 86.0
Glyma.04G072400 Glycine max HOM05D003461 ORTHO05D004386 3.4e-19 99.0 59 72.9
HanXRQChr08g0221141 Helianthus annuus HOM05D003461 ORTHO05D004386 3.4e-19 99.0 51 86.3
Lsat_1_v5_gn_5_45581 Lactuca sativa HOM05D003461 ORTHO05D004386 3.4e-19 99.0 51 86.3
Nn2g11834 Nelumbo nucifera HOM05D003461 ORTHO05D004386 3.4e-19 99.0 51 84.3
Sed0017351 Sechium edule HOM05D003461 ORTHO05D004386 3.4e-19 99.0 54 79.6
CANSAT01G0438 Cannabis sativa HOM05D003461 ORTHO05D004386 4.4e-19 98.6 54 81.5
Rhsim07G0154200 Rhododendron simsii HOM05D003461 ORTHO05D004386 4.4e-19 98.6 54 81.5
Aqoxy7G01835 Aquilegia oxysepala HOM05D003461 ORTHO05D004386 5.7e-19 98.2 68 66.2
CARHR115590 Cardamine hirsuta HOM05D003461 ORTHO05D004386 7.5e-19 97.8 51 84.3
ECA240G1832 Erigeron canadensis HOM05D003461 ORTHO05D004386 7.5e-19 97.8 51 82.4
GSVIVG01035727001 Vitis vinifera HOM05D003461 ORTHO05D004386 9.8e-19 97.4 54 77.8
Aa31sc76G80 Aethionema arabicum HOM05D003461 ORTHO05D004386 1.3e-18 97.1 51 82.4
Lj7C712G4 Lonicera japonica HOM05D003461 ORTHO05D004386 1.3e-18 97.1 47 89.4
CAN.G21.14 Capsicum annuum HOM05D003461 ORTHO05D004386 2.2e-18 96.3 47 87.2
Eucgr.C02859 Eucalyptus grandis HOM05D003461 ORTHO05D004386 2.2e-18 96.3 50 82.0
Glyma.06G073700 Glycine max HOM05D003461 ORTHO05D004386 2.2e-18 96.3 51 80.4
Lj5g0000879 Lotus japonicus HOM05D003461 ORTHO05D004386 2.2e-18 96.3 51 82.4
Nitab4.5_0000125g0120 Nicotiana tabacum HOM05D003461 ORTHO05D004386 2.2e-18 96.3 47 87.2
Nitab4.5_0009600g0020 Nicotiana tabacum HOM05D003461 ORTHO05D004386 2.2e-18 96.3 47 87.2
Solyc08g067870.2 Solanum lycopersicum HOM05D003461 ORTHO05D004386 2.2e-18 96.3 47 87.2
Sopen08g021790 Solanum pennellii HOM05D003461 ORTHO05D004386 2.2e-18 96.3 47 87.2
Cc08_g08280 Coffea canephora HOM05D003461 ORTHO05D004386 2.8e-18 95.9 51 82.4
BcaB06g28084 Brassica carinata HOM05D003461 ORTHO05D004386 3.7e-18 95.5 51 80.4
Thhalv10000008m.g Eutrema salsugineum HOM05D003461 ORTHO05D004386 4.9e-18 95.1 51 84.3
Lj1g0021913 Lotus japonicus HOM05D003461 ORTHO05D004386 4.9e-18 95.1 59 72.9
ClCG05G017220 Citrullus lanatus HOM05D003461 ORTHO05D004386 6.3e-18 94.7 51 78.4
Medtr1g010300 Medicago truncatula HOM05D003461 ORTHO05D004386 8.3e-18 94.4 51 82.4
TPR.G20094 Trifolium pratense HOM05D003461 ORTHO05D004386 8.3e-18 94.4 51 82.4
TPR.G27605 Trifolium pratense HOM05D003461 ORTHO05D004386 8.3e-18 94.4 59 71.2
Phvul.009G098100 Phaseolus vulgaris HOM05D003461 ORTHO05D004386 1.8e-17 93.2 51 76.5
ATR0037G074 Amborella trichopoda HOM05D003461 ORTHO05D004386 2.4e-17 92.8 54 74.1
Psat5g027760 Pisum sativum HOM05D003461 ORTHO05D004386 2.4e-17 92.8 59 67.8
CsaV3_3G046700 Cucumis sativus L. HOM05D003461 ORTHO05D004386 3.1e-17 92.4 51 78.4
MELO3C003666.2 Cucumis melo HOM05D003461 ORTHO05D004386 4.1e-17 92.0 51 78.4
PSO063G5065 Papaver somniferum HOM05D003461 ORTHO05D004386 4.1e-17 92.0 51 76.5
PSO782G2185 Papaver somniferum HOM05D003461 ORTHO05D004386 4.1e-17 92.0 51 76.5
VMungo1309G0474 Vigna mungo HOM05D003461 ORTHO05D004386 4.1e-17 92.0 51 74.5
Sc09g0008870 Simmondsia chinensis HOM05D003461 ORTHO05D004386 7.0e-17 91.3 50 78.0
SGA_v2.0_scaffold27G11498 Striga asiatica HOM05D003461 ORTHO05D004386 7.0e-17 91.3 51 80.4
DCAR_006261 Daucus carota HOM05D003461 ORTHO05D004386 1.6e-16 90.1 47 85.1
Medtr3g108080 Medicago truncatula HOM05D003461 ORTHO05D004386 2.0e-16 89.7 59 67.8
Os01g0179400 Oryza sativa ssp. japonica HOM05D003461 ORTHO05D004386 2.0e-16 89.7 51 72.5
HPP92_015152 Vanilla planifolia HOM05D003461 ORTHO05D004386 3.5e-16 89.0 51 72.5
HPP92_015178 Vanilla planifolia HOM05D003461 ORTHO05D004386 3.5e-16 89.0 51 72.5
unitig_747.g21880 Utricularia gibba HOM05D003461 ORTHO05D004386 5.9e-16 88.2 47 78.7
Zm00001eb122270 Zea mays HOM05D003461 ORTHO05D004386 1.3e-15 87.0 51 70.6
Migut.A00272 Erythranthe guttata HOM05D003461 ORTHO05D004386 2.9e-15 85.9 47 76.6
SalBow4G0560 Salvia bowleyana HOM05D003461 ORTHO05D004386 3.8e-15 85.5 51 70.6
SEGI_20580 Sequoiadendron giganteum HOM05D003461 ORTHO05D004386 1.6e-13 80.1 51 68.6
AagrBONN_evm.TU.Sc2ySwM_228.5632 Anthoceros agrestis HOM05D003461 ORTHO05D004386 2.9e-10 69.3 46 54.3
Mapoly0004s0170 Marchantia polymorpha HOM05D003461 ORTHO05D004386 9.2e-09 64.3 46 52.2
Pp3c4_150 Physcomitrium patens HOM05D003461 ORTHO05D004386 2.7e-08 62.8 46 50.0
SMO347G0057 Selaginella moellendorffii HOM05D003461 ORTHO05D004386 2.3e-07 59.7 65 38.5


User provided reference genes

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