Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 2.0e-106 389.0 191 100.0
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 1.3e-60 236.9 148 76.4
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 6.4e-60 234.6 158 72.2
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 4.2e-59 231.9 138 80.4
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 1.6e-58 229.9 140 75.7
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 2.1e-58 229.6 152 73.0
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 2.1e-58 229.6 150 72.7
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 3.5e-58 228.8 141 75.9
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 6.0e-58 228.0 148 71.6
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 7.9e-58 227.6 153 69.9
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 1.0e-57 227.3 141 75.2
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.3e-57 226.9 154 72.1
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.8e-57 226.5 150 72.0
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 2.3e-57 226.1 141 74.5
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 2.3e-57 226.1 153 73.2
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 3.0e-57 225.7 151 70.2
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 3.0e-57 225.7 150 72.0
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 6.7e-57 224.6 152 70.4
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 1.1e-56 223.8 146 70.5
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 1.1e-56 223.8 150 71.3
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 1.1e-56 223.8 161 70.8
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.9e-56 223.0 150 73.3
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 5.6e-56 221.5 146 71.2
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 7.4e-56 221.1 137 74.5
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 1.6e-55 219.9 151 70.9
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 1.6e-55 219.9 161 68.3
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 1.6e-55 219.9 151 70.9
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 1.6e-55 219.9 143 70.6
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 3.7e-55 218.8 152 71.1
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 3.7e-55 218.8 150 70.0
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 6.2e-55 218.0 154 68.8
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 6.2e-55 218.0 149 72.5
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 6.2e-55 218.0 147 71.4
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 1.1e-54 217.2 147 70.1
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 1.8e-54 216.5 151 69.5
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 1.8e-54 216.5 151 69.5
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 1.8e-54 216.5 151 69.5
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 1.8e-54 216.5 157 67.5
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 2.4e-54 216.1 144 71.5
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 3.1e-54 215.7 149 69.1
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 4.0e-54 215.3 152 70.4
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 4.0e-54 215.3 133 73.7
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 5.3e-54 214.9 169 61.5
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 5.3e-54 214.9 146 69.9
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 9.0e-54 214.2 157 68.2
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 9.0e-54 214.2 180 62.2
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.2e-53 213.8 140 72.1
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 1.2e-53 213.8 157 66.2
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.5e-53 213.4 139 71.9
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 2.0e-53 213.0 151 70.2
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 2.6e-53 212.6 144 70.8
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 2.6e-53 212.6 151 67.5
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 2.6e-53 212.6 148 70.9
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 3.4e-53 212.2 150 70.0
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 3.4e-53 212.2 138 73.2
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 4.5e-53 211.8 144 68.1
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 7.6e-53 211.1 138 71.7
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 1.0e-52 210.7 148 68.9
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 1.3e-52 210.3 154 66.9
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 1.3e-52 210.3 152 67.8
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 1.3e-52 210.3 161 65.2
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 2.9e-52 209.1 151 68.2
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 3.8e-52 208.8 151 68.9
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 6.5e-52 208.0 152 64.5
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 1.4e-51 206.8 145 69.0
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 1.4e-51 206.8 165 63.0
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 2.5e-51 206.1 156 61.5
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 4.2e-51 205.3 149 70.5
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 7.1e-51 204.5 140 70.7
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 7.1e-51 204.5 135 67.4
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 9.3e-51 204.1 133 73.7
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 1.6e-50 203.4 152 65.8
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 1.6e-50 203.4 141 66.7
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 1.6e-50 203.4 133 69.9
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 2.7e-50 202.6 127 76.4
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 3.5e-50 202.2 134 73.1
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 7.9e-50 201.1 158 61.4
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 1.8e-49 199.9 136 66.9
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 2.3e-49 199.5 137 73.0
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 3.0e-49 199.1 136 68.4
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 6.7e-49 198.0 136 69.1
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 1.5e-48 196.8 139 69.8
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 9.6e-48 194.1 141 68.8
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 2.8e-47 192.6 142 64.8
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 2.4e-46 189.5 148 64.9
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 3.8e-44 182.2 147 61.9
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 5.0e-44 181.8 147 61.9
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 9.3e-43 177.6 149 59.1
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 3.1e-38 162.5 142 54.2
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 3.1e-38 162.5 133 59.4
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 9.1e-38 161.0 206 47.6
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 3.4e-37 159.1 134 56.7
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 5.9e-37 158.3 101 73.3
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 3.8e-36 155.6 152 56.6
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 1.9e-35 153.3 148 49.3
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 1.4e-33 147.1 139 52.5
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 1.1e-32 144.1 133 51.9
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 7.4e-32 141.4 134 51.5
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 1.4e-30 137.1 160 47.5
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 6.9e-30 134.8 93 67.7
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 2.0e-29 133.3 104 65.4
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 1.0e-28 131.0 101 64.4
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 1.7e-28 130.2 97 67.0
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 2.5e-27 126.3 144 47.2
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 1.8e-25 120.2 147 44.9
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 1.5e-24 117.1 131 49.6
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 2.6e-21 106.3 121 48.8
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 1.9e-19 100.1 81 64.2
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 1.9e-19 100.1 132 44.7
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 2.6e-16 89.7 189 31.7
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 9.1e-14 81.3 164 31.7
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 1.2e-13 80.9 73 58.9
COL.COLO4_02194 Corchorus olitorius HOM05D001568 ORTHO05D009161 1.2e-08 64.3 102 38.2


User provided reference genes

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