Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc91.42 Carica papaya HOM05D000144 ORTHO05D000392 8.4e-48 193.4 97 100.0
MD15G1120600 Malus domestica HOM05D000144 ORTHO05D000392 2.6e-17 92.0 95 60.0
TAR636G0356 Trochodendron aralioides HOM05D000144 ORTHO05D000392 2.9e-16 88.6 85 58.8
COL.COLO4_23982 Corchorus olitorius HOM05D000144 ORTHO05D000392 1.2e-14 83.2 75 66.7
DCAR_003043 Daucus carota HOM05D000144 ORTHO05D000392 2.5e-12 75.5 63 63.5
Atru.chr7.2379 Acer truncatum HOM05D000144 ORTHO05D000392 3.3e-12 75.1 64 68.8
GSVIVG01035813001 Vitis vinifera HOM05D000144 ORTHO05D000392 5.7e-12 74.3 62 66.1
QL02p022510 Quercus lobata HOM05D000144 ORTHO05D000392 4.8e-11 71.2 62 62.9
Prupe.1G473300 Prunus persica HOM05D000144 ORTHO05D000392 1.1e-10 70.1 60 65.0
Manes.16G119700 Manihot esculenta HOM05D000144 ORTHO05D000392 2.4e-10 68.9 63 65.1
Sabra06G0196200 Salix brachista HOM05D000144 ORTHO05D000392 1.2e-09 66.6 63 60.3
Dinv11619 Davidia involucrata HOM05D000144 ORTHO05D000392 5.9e-09 64.3 60 58.3
Potri.006G250900 Populus trichocarpa HOM05D000144 ORTHO05D000392 5.9e-09 64.3 71 53.5
Sabra18G0032000 Salix brachista HOM05D000144 ORTHO05D000392 1.0e-08 63.5 63 58.7
Dinv30175 Davidia involucrata HOM05D000144 ORTHO05D000392 1.3e-08 63.2 63 58.7
Aa31LG2G17490 Aethionema arabicum HOM05D000144 ORTHO05D000392 1.7e-08 62.8 82 45.1
Solyc08g067090.4 Solanum lycopersicum HOM05D000144 ORTHO05D000392 1.7e-08 62.8 70 55.7
Sopen08g021050 Solanum pennellii HOM05D000144 ORTHO05D000392 1.7e-08 62.8 70 55.7
PGSC0003DMG400023148 Solanum tuberosum HOM05D000144 ORTHO05D000392 1.7e-08 62.8 70 55.7
arahy.Tifrunner.gnm1.ann1.5A5JTD Arachis hypogaea HOM05D000144 ORTHO05D000392 2.2e-08 62.4 86 51.2
Lj7A718G63 Lonicera japonica HOM05D000144 ORTHO05D000392 2.9e-08 62.0 68 55.9
Manes.03G017300 Manihot esculenta HOM05D000144 ORTHO05D000392 3.8e-08 61.6 68 58.8
CAN.G98.28 Capsicum annuum HOM05D000144 ORTHO05D000392 5.0e-08 61.2 70 54.3
Duzib187G1907 Durio zibethinus HOM05D000144 ORTHO05D000392 6.5e-08 60.8 57 63.2
arahy.Tifrunner.gnm1.ann1.8T2R0M Arachis hypogaea HOM05D000144 ORTHO05D000392 1.1e-07 60.1 79 53.2
CiPaw.07G221000 Carya illinoinensis HOM05D000144 ORTHO05D000392 1.1e-07 60.1 70 52.9
Hma1.2p1_0000F.1_g000740 Hydrangea macrophylla HOM05D000144 ORTHO05D000392 1.1e-07 60.1 62 51.6
TWI34G1630 Tripterygium wilfordii HOM05D000144 ORTHO05D000392 1.1e-07 60.1 68 51.5
AUR62024883 Chenopodium quinoa HOM05D000144 ORTHO05D019541 1.4e-07 59.7 86 48.8
Glyma.06G070300 Glycine max HOM05D000144 ORTHO05D000392 1.9e-07 59.3 65 58.5
Sed0013762 Sechium edule HOM05D000144 ORTHO05D000392 1.9e-07 59.3 56 58.9
MELO3C011236.2 Cucumis melo HOM05D000144 ORTHO05D000392 2.5e-07 58.9 56 55.4
Ca_12931_v3 Cicer arietinum L. HOM05D000144 ORTHO05D000392 3.2e-07 58.5 88 48.9
CsaV3_2G031860 Cucumis sativus L. HOM05D000144 ORTHO05D000392 3.2e-07 58.5 56 55.4
TPR.G15669 Trifolium pratense HOM05D000144 ORTHO05D000392 3.2e-07 58.5 72 52.8
AUR62030664 Chenopodium quinoa HOM05D000144 ORTHO05D019541 4.2e-07 58.2 86 48.8
ClCG08G013140 Citrullus lanatus HOM05D000144 ORTHO05D000392 4.2e-07 58.2 53 60.4
FvH4_2g29630 Fragaria vesca HOM05D000144 ORTHO05D000392 4.2e-07 58.2 63 55.6
FAN15G0827 Fragaria x ananassa HOM05D000144 ORTHO05D000392 4.2e-07 58.2 63 55.6
FAN20G2669 Fragaria x ananassa HOM05D000144 ORTHO05D000392 4.2e-07 58.2 63 55.6
FAN24G0244 Fragaria x ananassa HOM05D000144 ORTHO05D000392 4.2e-07 58.2 63 55.6
Glyma.04G068700 Glycine max HOM05D000144 ORTHO05D000392 4.2e-07 58.2 80 51.2
Lj1g0027889 Lotus japonicus HOM05D000144 ORTHO05D000392 4.2e-07 58.2 67 58.2
TWI63G1009 Tripterygium wilfordii HOM05D000144 ORTHO05D000392 4.2e-07 58.2 63 52.4
Ciclev10007495m.g Citrus clementina HOM05D000144 ORTHO05D000392 7.2e-07 57.4 54 63.0
TWI32G1341 Tripterygium wilfordii HOM05D000144 ORTHO05D000392 7.2e-07 57.4 63 54.0
Carub.0007s0815 Capsella rubella HOM05D000144 ORTHO05D000392 9.3e-07 57.0 65 49.2
FAN27G2628 Fragaria x ananassa HOM05D000144 ORTHO05D000392 9.3e-07 57.0 63 54.0
TAR626G1755 Trochodendron aralioides HOM05D000144 ORTHO05D000392 9.3e-07 57.0 63 57.1
Sed0024553 Sechium edule HOM05D000144 ORTHO05D000392 1.6e-06 56.2 56 55.4
VMungo0647G0816 Vigna mungo HOM05D000144 ORTHO05D000392 1.6e-06 56.2 63 55.6
Haze_21564 Corylus avellana HOM05D000144 ORTHO05D000392 2.1e-06 55.8 45 64.4
Nitab4.5_0000151g0180 Nicotiana tabacum HOM05D000144 ORTHO05D000392 2.1e-06 55.8 66 57.6
Peaxi162Scf00341g00049 Petunia axillaris HOM05D000144 ORTHO05D000392 2.1e-06 55.8 67 55.2
CARHR240340 Cardamine hirsuta HOM05D000144 ORTHO05D000392 2.7e-06 55.5 70 48.6
RcHm_v2.0_Chr6g0298601 Rosa chinensis HOM05D000144 ORTHO05D000392 3.6e-06 55.1 61 54.1
Oeu045328.2 Olea europaea HOM05D000144 ORTHO05D000392 4.6e-06 54.7 70 52.9
Psat6g029760 Pisum sativum HOM05D000144 ORTHO05D000392 6.1e-06 54.3 72 50.0
Actinidia15686 Actinidia chinensis HOM05D000144 ORTHO05D000392 7.9e-06 53.9 72 47.2
Gohir.A07G038100 Gossypium hirsutum HOM05D000144 ORTHO05D000392 7.9e-06 53.9 43 72.1
Lalb_Chr14g0361921 Lupinus albus HOM05D000144 ORTHO05D000392 7.9e-06 53.9 63 55.6


User provided reference genes

Program Settings