Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 3.9e-216 754.6 400 100.0
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 1.0e-62 245.0 405 41.7
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 1.7e-62 244.2 334 46.1
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 3.8e-62 243.0 356 43.5
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 3.1e-56 223.4 388 39.2
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 1.5e-55 221.1 366 41.3
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 7.7e-55 218.8 397 37.3
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 6.5e-54 215.7 382 37.7
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 6.5e-54 215.7 384 39.8
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.1e-53 214.9 396 38.4
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 4.6e-52 209.5 229 55.9
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 3.0e-51 206.8 292 43.2
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 6.7e-51 205.7 289 44.3
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 2.2e-49 200.7 255 49.0
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 2.2e-49 200.7 255 49.0
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 6.3e-49 199.1 394 36.8
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 4.1e-48 196.4 255 48.6
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 9.1e-48 195.3 254 48.0
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 1.5e-47 194.5 374 36.4
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 1.0e-43 181.8 204 51.5
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 2.3e-43 180.6 390 37.2
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 1.5e-42 177.9 361 35.7
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 2.6e-42 177.2 239 49.4
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 2.6e-42 177.2 236 48.3
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 9.7e-42 175.3 229 48.5
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 2.8e-41 173.7 229 47.6
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 3.7e-41 173.3 214 48.6
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 3.7e-41 173.3 213 52.1
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 4.8e-41 172.9 236 47.9
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 6.3e-41 172.6 229 46.3
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 1.4e-40 171.4 245 45.3
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 2.4e-40 170.6 205 50.7
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.1e-40 170.2 230 46.5
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 4.1e-40 169.9 234 45.7
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 7.0e-40 169.1 187 54.5
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 7.0e-40 169.1 277 41.9
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 1.2e-39 168.3 253 44.3
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 2.0e-39 167.5 243 45.7
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 7.7e-39 165.6 237 44.7
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 1.3e-38 164.9 253 44.7
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 1.3e-38 164.9 253 44.7
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 6.5e-38 162.5 252 42.9
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 6.5e-38 162.5 253 43.9
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 6.5e-38 162.5 232 47.0
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 1.1e-37 161.8 195 50.3
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 1.1e-37 161.8 252 42.9
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 1.1e-37 161.8 355 38.6
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 1.9e-37 161.0 269 40.9
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 5.5e-37 159.5 230 44.3
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 5.5e-37 159.5 232 44.8
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 7.2e-37 159.1 345 37.1
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 1.2e-36 158.3 232 44.4
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 1.6e-36 157.9 253 43.1
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.7e-36 157.1 246 44.3
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 3.6e-36 156.8 278 40.3
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 1.0e-35 155.2 237 44.3
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 1.8e-35 154.5 234 44.0
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 3.0e-35 153.7 312 36.5
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 2.0e-34 151.0 280 39.6
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 3.3e-34 150.2 341 32.6
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 7.5e-34 149.1 233 41.6
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 9.7e-34 148.7 319 36.4
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 1.3e-33 148.3 230 41.7
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 3.7e-33 146.7 233 41.6
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 4.8e-33 146.4 224 42.0
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 9.1e-32 142.1 239 39.7
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 2.7e-31 140.6 236 40.7
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 2.7e-31 140.6 236 41.1
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 7.7e-31 139.0 277 38.3
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 2.9e-30 137.1 224 41.5
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.1e-29 135.2 203 44.3
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 2.5e-29 134.0 201 46.3
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 9.4e-29 132.1 251 37.8
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 9.4e-29 132.1 232 38.8
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 6.1e-28 129.4 228 42.5
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 1.0e-27 128.6 500 26.8
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 1.0e-27 128.6 213 44.6
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 2.2e-25 120.9 82 78.0
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.1e-24 117.1 191 42.4
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 1.2e-23 115.2 485 27.2
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 5.5e-21 106.3 226 36.3
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 1.2e-20 105.1 504 26.0
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 2.1e-20 104.4 106 54.7
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 2.1e-20 104.4 211 37.9
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 1.5e-18 98.2 181 35.9
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 9.8e-18 95.5 235 31.5
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 1.2e-15 88.6 154 41.6
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.6e-15 88.2 209 33.5
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 2.9e-14 84.0 98 49.0
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 2.1e-12 77.8 54 66.7
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 6.1e-12 76.3 103 36.9
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 1.8e-11 74.7 106 40.6
Cfa021487 Carpinus fangiana HOM05D000146 ORTHO05D007947 2.0e-10 71.2 155 32.3
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 3.5e-07 60.5 60 53.3
SMO329G0073 Selaginella moellendorffii HOM05D007522 ORTHO05D009518 3.0e-06 57.4 96 38.5
SEGI_10687 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 8.6e-06 55.8 115 33.9


User provided reference genes

Program Settings