Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc90.66 Carica papaya HOM05D005674 ORTHO05D007015 8.8e-80 301.6 391 100.0
Psat0s443g0080 Pisum sativum HOM05D005674 ORTHO05D007015 8.3e-30 135.6 447 64.2
Lj3g0025693 Lotus japonicus HOM05D005674 ORTHO05D007015 1.5e-26 124.8 447 67.6
Sc04g0009990 Simmondsia chinensis HOM05D005674 ORTHO05D007015 8.1e-25 119.0 82 70.7
CSS0001557 Camellia sinensis var. sinensis HOM05D005674 ORTHO05D007015 5.2e-24 116.3 82 69.5
Duzib160G0406 Durio zibethinus HOM05D005674 ORTHO05D007015 1.5e-23 114.8 82 68.3
Rhsim04G0075800 Rhododendron simsii HOM05D005674 ORTHO05D007015 1.5e-23 114.8 80 68.8
Hund00863 Selenicereus undatus HOM05D005674 ORTHO05D007015 1.5e-23 114.8 414 71.3
QL08p042254 Quercus lobata HOM05D005674 ORTHO05D007015 2.0e-23 114.4 80 72.5
GSVIVG01024415001 Vitis vinifera HOM05D005674 ORTHO05D007015 3.4e-23 113.6 435 70.8
Dinv12372 Davidia involucrata HOM05D005674 ORTHO05D007015 5.8e-23 112.8 80 70.0
Glyma.03G075500 Glycine max HOM05D005674 ORTHO05D007015 5.8e-23 112.8 447 66.4
ClCG07G002660 Citrullus lanatus HOM05D005674 ORTHO05D007015 7.6e-23 112.5 80 67.5
Medtr7g024140 Medicago truncatula HOM05D005674 ORTHO05D007015 1.3e-22 111.7 448 65.8
Thecc.01G153300 Theobroma cacao HOM05D005674 ORTHO05D007015 1.7e-22 111.3 80 67.5
Lalb_Chr01g0007701 Lupinus albus HOM05D005674 ORTHO05D007015 3.8e-22 110.2 80 63.8
Cfa012588 Carpinus fangiana HOM05D005674 ORTHO05D007015 4.9e-22 109.8 80 67.5
TPR.G14745 Trifolium pratense HOM05D005674 ORTHO05D007015 4.9e-22 109.8 448 58.9
CiPaw.03G192600 Carya illinoinensis HOM05D005674 ORTHO05D007015 6.4e-22 109.4 80 65.0
Ciclev10008244m.g Citrus clementina HOM05D005674 ORTHO05D007015 8.4e-22 109.0 80 65.0
CAN.G1360.17 Capsicum annuum HOM05D001556 ORTHO05D001505 1.1e-21 108.6 193 34.7
Phvul.009G126100 Phaseolus vulgaris HOM05D005674 ORTHO05D007015 1.1e-21 108.6 447 65.3
VMungo1309G1849 Vigna mungo HOM05D005674 ORTHO05D007015 1.4e-21 108.2 447 66.0
DCAR_018956 Daucus carota HOM05D005674 ORTHO05D007015 1.9e-21 107.8 82 61.0
MD07G1055100 Malus domestica HOM05D005674 ORTHO05D007015 2.4e-21 107.5 79 69.6
Actinidia00858 Actinidia chinensis HOM05D005674 ORTHO05D007015 3.2e-21 107.1 82 64.6
Gorai.013G183800 Gossypium raimondii HOM05D005674 ORTHO05D007015 3.2e-21 107.1 82 63.4
Peaxi162Scf00888g00007 Petunia axillaris HOM05D005674 ORTHO05D007015 3.2e-21 107.1 171 36.8
TAR627G1060 Trochodendron aralioides HOM05D005674 ORTHO05D007015 4.1e-21 106.7 79 67.1
Gorai.011G295800 Gossypium raimondii HOM05D005674 ORTHO05D007015 5.4e-21 106.3 82 62.2
Prupe.4G280300 Prunus persica HOM05D005674 ORTHO05D007015 5.4e-21 106.3 80 68.8
Manes.09G079700 Manihot esculenta HOM05D005674 ORTHO05D007015 7.1e-21 105.9 80 61.2
Gohir.D10G254800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 9.2e-21 105.5 82 62.2
Lj1P677T28 Lonicera japonica HOM05D005674 ORTHO05D007015 9.2e-21 105.5 82 64.6
Gohir.A10G242800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 2.1e-20 104.4 82 62.2
Gohir.D13G161800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 2.1e-20 104.4 81 63.0
Hma1.2p1_0067F.1_g036940 Hydrangea macrophylla HOM05D005674 ORTHO05D007015 4.6e-20 103.2 81 61.7
CANSAT54G2399 Cannabis sativa HOM05D005674 ORTHO05D007015 1.7e-19 101.3 76 65.8
THA.LOC104806715 Tarenaya hassleriana HOM05D005674 ORTHO05D007015 1.7e-19 101.3 449 65.9
TPR.G15161 Trifolium pratense HOM05D005674 ORTHO05D007015 1.7e-19 101.3 170 34.1
Manes.08G068200 Manihot esculenta HOM05D005674 ORTHO05D007015 2.3e-19 100.9 79 60.8
MD15G1427800 Malus domestica HOM05D005674 ORTHO05D007015 3.0e-19 100.5 79 63.3
CsaV3_4G030900 Cucumis sativus L. HOM05D005674 ORTHO05D007015 5.1e-19 99.8 77 62.3
Atru.chr7.2335 Acer truncatum HOM05D005674 ORTHO05D007015 6.6e-19 99.4 82 58.5
HanXRQChr13g0421081 Helianthus annuus HOM05D005674 ORTHO05D007015 6.6e-19 99.4 77 59.7
Prupe.3G114500 Prunus persica HOM05D005674 ORTHO05D007015 6.6e-19 99.4 79 64.6
Dinv11955 Davidia involucrata HOM05D005674 ORTHO05D007015 1.1e-18 98.6 75 65.3
arahy.Tifrunner.gnm1.ann1.U482D3 Arachis hypogaea HOM05D005674 ORTHO05D007015 1.5e-18 98.2 80 57.5
Ca_14577_v3 Cicer arietinum L. HOM05D005674 ORTHO05D007015 1.9e-18 97.8 79 58.2
arahy.Tifrunner.gnm1.ann1.MAGV51 Arachis hypogaea HOM05D005674 ORTHO05D007015 2.5e-18 97.4 80 56.2
Solyc07g055220.3 Solanum lycopersicum HOM05D005674 ORTHO05D007015 2.5e-18 97.4 82 54.9
Sopen07g027000 Solanum pennellii HOM05D005674 ORTHO05D007015 2.5e-18 97.4 82 54.9
CAN.G1360.18 Capsicum annuum HOM05D005674 ORTHO05D007015 3.3e-18 97.1 82 53.7
Lalb_Chr19g0127261 Lupinus albus HOM05D005674 ORTHO05D007015 3.3e-18 97.1 127 40.2
PGSC0003DMG401020415 Solanum tuberosum HOM05D005674 ORTHO05D007015 3.3e-18 97.1 80 55.0
Sed0024338 Sechium edule HOM05D005674 ORTHO05D007015 4.3e-18 96.7 78 60.3
PGR142G3640 Punica granatum HOM05D005674 ORTHO05D007015 5.6e-18 96.3 79 62.0
Sed0008626 Sechium edule HOM05D005674 ORTHO05D007015 7.3e-18 95.9 77 62.3
SGA_v2.0_scaffold18G08491 Striga asiatica HOM05D005674 ORTHO05D007015 9.6e-18 95.5 78 55.1
CAN.G625.40 Capsicum annuum HOM05D005674 ORTHO05D007015 1.2e-17 95.1 81 55.6
Gohir.A13G157000 Gossypium hirsutum HOM05D005674 ORTHO05D007015 1.6e-17 94.7 82 57.3
Migut.F00129 Erythranthe guttata HOM05D005674 ORTHO05D007015 2.1e-17 94.4 450 53.8
Sabra06G0005200 Salix brachista HOM05D005674 ORTHO05D007015 2.1e-17 94.4 75 60.0
TWI31G0445 Tripterygium wilfordii HOM05D005674 ORTHO05D007015 2.8e-17 94.0 80 57.5
PGSC0003DMG400026386 Solanum tuberosum HOM05D005674 ORTHO05D007015 3.6e-17 93.6 80 55.0
Lsat_1_v5_gn_3_116841 Lactuca sativa HOM05D005674 ORTHO05D007015 4.7e-17 93.2 80 53.8
Solyc02g086230.2 Solanum lycopersicum HOM05D005674 ORTHO05D007015 4.7e-17 93.2 80 53.8
Sopen02g030910 Solanum pennellii HOM05D005674 ORTHO05D007015 4.7e-17 93.2 80 53.8
TWI12G0566 Tripterygium wilfordii HOM05D005674 ORTHO05D007015 4.7e-17 93.2 80 58.8
Cc05_g08520 Coffea canephora HOM05D005674 ORTHO05D007015 6.2e-17 92.8 82 52.4
Potri.006G006500 Populus trichocarpa HOM05D005674 ORTHO05D007015 8.1e-17 92.4 75 58.7
FvH4_6g27690 Fragaria vesca HOM05D005674 ORTHO05D007015 1.1e-16 92.0 79 55.7
AL8G11670 Arabidopsis lyrata HOM05D005674 ORTHO05D007015 1.8e-16 91.3 167 34.7
arahy.Tifrunner.gnm1.ann1.I145LQ Arachis hypogaea HOM05D005674 ORTHO05D007015 4.0e-16 90.1 74 56.8
ECA240G0139 Erigeron canadensis HOM05D005674 ORTHO05D007015 5.2e-16 89.7 80 51.2
MBI15_g37633_MAGBIO Magnolia biondii HOM05D000146 ORTHO05D000178 5.2e-16 89.7 79 57.0
COL.COLO4_33609 Corchorus olitorius HOM05D005674 ORTHO05D007015 6.9e-16 89.4 80 56.2
arahy.Tifrunner.gnm1.ann1.JH6JIJ Arachis hypogaea HOM05D005674 ORTHO05D007015 8.9e-16 89.0 75 56.0
AUR62040438 Chenopodium quinoa HOM05D005674 ORTHO05D007015 8.9e-16 89.0 73 54.8
RcHm_v2.0_Chr2g0130841 Rosa chinensis HOM05D005674 ORTHO05D007015 1.5e-15 88.2 79 55.7
CARHR174820 Cardamine hirsuta HOM05D005674 ORTHO05D007015 2.0e-15 87.8 167 34.1
AT5G46680 Arabidopsis thaliana HOM05D005674 ORTHO05D007015 2.6e-15 87.4 167 32.9
Nitab4.5_0000249g0090 Nicotiana tabacum HOM05D005674 ORTHO05D007015 2.6e-15 87.4 80 52.5
PSO782G5737 Papaver somniferum HOM05D005674 ORTHO05D007015 2.6e-15 87.4 81 54.3
SalBow4G2062 Salvia bowleyana HOM05D005674 ORTHO05D007015 2.6e-15 87.4 82 47.6
AL7G36590 Arabidopsis lyrata HOM05D005674 ORTHO05D007015 3.4e-15 87.0 167 32.9
AUR62024049 Chenopodium quinoa HOM05D005674 ORTHO05D007015 3.4e-15 87.0 74 52.7
BcaC06g33618 Brassica carinata HOM05D005674 ORTHO05D007015 4.4e-15 86.7 167 32.9
A03p50860 Brassica napus HOM05D005674 ORTHO05D007015 4.4e-15 86.7 167 32.9
C07p49250 Brassica napus HOM05D005674 ORTHO05D007015 4.4e-15 86.7 167 32.9
BolC7t45434H Brassica oleracea HOM05D005674 ORTHO05D007015 4.4e-15 86.7 167 32.9
BraA03t14173Z Brassica rapa HOM05D005674 ORTHO05D007015 4.4e-15 86.7 167 32.9
Nitab4.5_0007923g0040 Nicotiana tabacum HOM05D005674 ORTHO05D007015 4.4e-15 86.7 82 50.0
Nn2g12528 Nelumbo nucifera HOM05D005674 ORTHO05D007015 7.6e-15 85.9 78 56.4
Carub.0007s2342 Capsella rubella HOM05D005674 ORTHO05D007015 1.3e-14 85.1 167 31.7
MELO3C033809.2 Cucumis melo HOM05D005674 ORTHO05D007015 1.3e-14 85.1 70 61.4
Sp7g16190 Schrenkiella parvula HOM05D005674 ORTHO05D007015 1.3e-14 85.1 167 32.9
PSO063G6562 Papaver somniferum HOM05D005674 ORTHO05D007015 2.2e-14 84.3 81 53.1
Thhalv10025145m.g Eutrema salsugineum HOM05D005674 ORTHO05D007015 2.9e-14 84.0 167 32.3
Aa31LG6G670 Aethionema arabicum HOM05D005674 ORTHO05D007015 6.4e-14 82.8 167 31.7
C02p47730 Brassica napus HOM05D005674 ORTHO05D007015 6.4e-14 82.8 168 30.4
BolC2t10809H Brassica oleracea HOM05D005674 ORTHO05D007015 6.4e-14 82.8 168 30.4
Aa31LG10G3050 Aethionema arabicum HOM05D005674 ORTHO05D007015 1.4e-13 81.6 167 32.9
CsaV3_5G005440 Cucumis sativus L. HOM05D005674 ORTHO05D007015 1.9e-13 81.3 76 53.9
Nitab4.5_0000753g0050 Nicotiana tabacum HOM05D005674 ORTHO05D007015 5.4e-13 79.7 80 50.0
CARHR224650 Cardamine hirsuta HOM05D005674 ORTHO05D007015 7.1e-13 79.3 167 30.5
BraA02t08037Z Brassica rapa HOM05D005674 ORTHO05D007015 1.6e-12 78.2 76 53.9
Carub.0008s0124 Capsella rubella HOM05D005674 ORTHO05D007015 1.6e-12 78.2 167 31.7
Sp2g11490 Schrenkiella parvula HOM05D005674 ORTHO05D007015 2.1e-12 77.8 76 52.6
BcaC03g16871 Brassica carinata HOM05D005674 ORTHO05D007015 3.5e-12 77.0 76 52.6
A02p30210 Brassica napus HOM05D005674 ORTHO05D007015 4.6e-12 76.6 167 29.3
Zm00001eb201010 Zea mays HOM05D005674 ORTHO05D007015 4.6e-12 76.6 72 48.6
Duzib116G0841 Durio zibethinus HOM05D005674 ORTHO05D007015 1.0e-11 75.5 48 68.8
Os02g0793200 Oryza sativa ssp. japonica HOM05D005674 ORTHO05D007015 1.0e-11 75.5 75 45.3
HPP92_017208 Vanilla planifolia HOM05D005674 ORTHO05D007015 1.0e-11 75.5 74 48.6
Eucgr.K01145 Eucalyptus grandis HOM05D005674 ORTHO05D007015 2.3e-11 74.3 48 68.8
TAR626G0412 Trochodendron aralioides HOM05D005674 ORTHO05D007015 2.3e-11 74.3 82 51.2
Nitab4.5_0007990g0010 Nicotiana tabacum HOM05D005674 ORTHO05D007015 5.1e-11 73.2 76 48.7
Lalb_Chr02g0159181 Lupinus albus HOM05D005674 ORTHO05D007015 1.1e-10 72.0 79 48.1
Aqoxy3G02039 Aquilegia oxysepala HOM05D005674 ORTHO05D007015 4.3e-10 70.1 78 43.6
Lalb_Chr02g0154491 Lupinus albus HOM05D005674 ORTHO05D007015 9.6e-10 68.9 59 47.5
Thhalv10001221m.g Eutrema salsugineum HOM05D005674 ORTHO05D007015 1.3e-09 68.6 48 62.5
BcaC06g31458 Brassica carinata HOM05D005674 ORTHO05D007015 2.1e-09 67.8 80 48.8
MELO3C020050.2 Cucumis melo HOM05D005674 ORTHO05D007015 4.8e-09 66.6 47 57.4
Psat5g177920 Pisum sativum HOM05D005674 ORTHO05D007015 4.8e-09 66.6 103 42.7
CsaV3_5G013070 Cucumis sativus L. HOM05D005674 ORTHO05D007015 1.8e-08 64.7 44 59.1
CsaV3_UNG017130 Cucumis sativus L. HOM05D005674 ORTHO05D007015 1.8e-08 64.7 44 59.1
ATR1132G073 Amborella trichopoda HOM05D005674 ORTHO05D007015 9.0e-08 62.4 40 72.5
FAN23G2012 Fragaria x ananassa HOM05D005674 ORTHO05D007015 2.0e-07 61.2 48 60.4
Lalb_Chr06g0171701 Lupinus albus HOM05D005674 ORTHO05D007015 4.5e-07 60.1 143 27.3
CAN.G1034.39 Capsicum annuum HOM05D005674 ORTHO05D033540 2.2e-06 57.8 44 54.5
Aqoxy5G02826 Aquilegia oxysepala HOM05D000017 ORTHO05D000013 6.4e-06 56.2 60 41.7


User provided reference genes

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