Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 3.8e-171 604.7 306 100.0
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 4.0e-112 408.7 307 69.1
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 4.9e-110 401.7 308 68.8
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 2.1e-108 396.4 299 68.6
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 2.1e-108 396.4 299 69.2
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 3.0e-107 392.5 299 67.9
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 5.1e-107 391.7 307 68.1
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.1e-106 390.6 299 67.9
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 1.5e-106 390.2 295 68.5
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 1.5e-106 390.2 300 65.3
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.9e-106 389.8 300 67.3
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 1.9e-106 389.8 300 65.3
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 2.8e-105 386.0 300 68.3
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 3.1e-104 382.5 307 64.8
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 6.8e-104 381.3 300 67.7
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.5e-103 380.2 300 66.7
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 1.5e-103 380.2 307 65.5
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 3.4e-103 379.0 300 67.3
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 7.5e-103 377.9 307 67.1
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 1.7e-102 376.7 300 65.0
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 6.4e-102 374.8 307 66.1
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 1.1e-101 374.0 306 66.7
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.9e-101 373.2 307 65.1
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.2e-101 372.5 300 66.3
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 7.1e-101 371.3 307 66.1
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 1.6e-100 370.2 324 62.7
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 6.0e-100 368.2 307 65.8
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 1.3e-99 367.1 300 62.7
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 3.9e-99 365.5 299 65.6
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 8.6e-99 364.4 302 64.2
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 8.6e-99 364.4 302 64.2
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.1e-98 364.0 307 65.1
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 3.3e-98 362.5 306 63.4
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 3.3e-98 362.5 287 63.8
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 5.6e-98 361.7 299 62.9
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 9.5e-98 360.9 300 63.3
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 2.1e-97 359.8 304 62.5
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 6.2e-97 358.2 307 61.9
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 6.2e-97 358.2 307 61.9
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 6.2e-97 358.2 300 62.7
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.1e-96 357.5 307 63.8
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 4.0e-96 355.5 300 63.0
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 8.9e-96 354.4 307 59.3
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 2.0e-95 353.2 293 64.2
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 2.0e-95 353.2 306 61.4
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 2.6e-95 352.8 302 58.3
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 4.4e-95 352.1 306 62.4
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 9.9e-95 350.9 302 62.6
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 9.9e-95 350.9 299 60.2
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 1.7e-94 350.1 306 61.8
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 1.7e-94 350.1 307 60.3
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 4.9e-94 348.6 300 62.0
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 6.4e-94 348.2 308 59.1
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 6.4e-94 348.2 357 53.8
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 8.4e-94 347.8 309 59.5
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 2.4e-93 346.3 299 60.2
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 3.2e-93 345.9 312 59.0
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 5.4e-93 345.1 303 60.1
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 7.1e-93 344.7 308 61.7
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 7.1e-93 344.7 301 59.5
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 2.7e-92 342.8 301 59.5
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 3.5e-92 342.4 307 58.0
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 7.8e-92 341.3 296 60.5
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 2.3e-91 339.7 300 62.7
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 2.3e-91 339.7 300 60.0
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 2.3e-91 339.7 302 58.3
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 5.1e-91 338.6 299 58.9
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 1.1e-90 337.4 300 62.0
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 8.1e-89 331.3 312 56.7
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.8e-88 330.1 304 57.2
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.8e-88 330.1 307 57.3
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 2.4e-88 329.7 309 57.3
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 5.3e-88 328.6 308 57.8
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 6.9e-88 328.2 304 56.2
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.0e-87 326.6 300 58.3
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 2.0e-87 326.6 299 57.5
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 3.4e-87 325.9 300 60.3
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 1.3e-86 323.9 300 55.7
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 4.9e-86 322.0 304 56.6
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 4.2e-85 318.9 304 55.9
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 7.1e-85 318.2 304 54.9
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 7.1e-85 318.2 309 56.6
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.3e-83 313.9 313 53.4
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.7e-83 313.5 297 55.2
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 9.6e-82 307.8 277 58.5
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 9.6e-82 307.8 300 54.0
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 6.9e-80 301.6 307 56.4
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 5.8e-79 298.5 300 51.7
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 1.7e-78 297.0 303 53.1
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 1.2e-76 290.8 301 49.5
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 1.6e-76 290.4 300 53.7
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 7.4e-74 281.6 309 47.2
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.3e-73 280.8 309 47.2
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 1.5e-71 273.9 267 54.7
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 7.6e-71 271.6 207 67.1
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 1.6e-68 263.8 258 51.9
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 3.3e-66 256.1 307 51.5
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 9.3e-61 238.0 300 45.3
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 1.8e-59 233.8 272 49.3
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 2.3e-59 233.4 233 57.5
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.1e-58 231.1 195 62.6
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 3.3e-58 229.6 195 61.0
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 4.1e-48 196.1 171 63.2
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 6.1e-44 182.2 233 42.5
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.7e-38 164.1 193 50.3
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 2.2e-38 163.7 218 46.3
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.6e-34 150.2 105 69.5
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 4.5e-31 139.4 306 29.4
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 1.2e-28 131.3 136 50.7
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 1.5e-26 124.4 120 54.2
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 3.4e-26 123.2 142 48.6
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 2.8e-25 120.2 143 46.9
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 1.1e-24 118.2 116 48.3
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 1.1e-24 118.2 142 47.2
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 3.1e-24 116.7 103 57.3
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 4.5e-23 112.8 120 50.8
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 1.5e-21 107.8 120 49.2
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 2.3e-19 100.5 145 43.4
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 3.0e-19 100.1 245 35.9
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 4.0e-19 99.8 66 69.7
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 5.2e-19 99.4 65 70.8
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 2.0e-18 97.4 281 26.7
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 1.0e-14 85.1 71 57.7
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 1.2e-12 78.2 60 56.7
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 1.1e-08 65.1 116 33.6
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 6.6e-06 55.8 85 38.8


User provided reference genes

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