Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc9.283 Carica papaya HOM05D008235 ORTHO05D009358 4.0e-288 994.2 552 100.0
Haze_01504 Corylus avellana HOM05D008235 ORTHO05D009358 1.4e-54 218.4 587 32.0
Thecc.04G179500 Theobroma cacao HOM05D008235 ORTHO05D009358 4.9e-52 209.9 579 31.4
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 1.9e-51 208.0 586 31.7
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 3.9e-49 200.3 567 30.7
Gorai.011G142400 Gossypium raimondii HOM05D008235 ORTHO05D009358 4.0e-46 190.3 522 29.7
Potri.007G128500 Populus trichocarpa HOM05D008235 ORTHO05D009358 3.2e-43 180.6 576 29.9
Potri.017G029800 Populus trichocarpa HOM05D008235 ORTHO05D009358 9.3e-43 179.1 569 30.1
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 2.3e-41 174.5 513 32.0
Gohir.A03G088800 Gossypium hirsutum HOM05D008235 ORTHO05D009358 2.5e-40 171.0 573 28.8
Gohir.D02G114100 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.4e-38 165.2 580 28.6
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 1.5e-37 161.8 569 28.8
Gorai.005G128900 Gossypium raimondii HOM05D008235 ORTHO05D009358 5.8e-37 159.8 581 28.2
Duzib268G0443 Durio zibethinus HOM05D008235 ORTHO05D009358 2.4e-35 154.5 479 29.2
Sabra07G0105000 Salix brachista HOM05D008235 ORTHO05D009358 7.1e-35 152.9 598 28.1
Sabra17G0019200 Salix brachista HOM05D008235 ORTHO05D009358 4.6e-34 150.2 537 28.7
Manes.11G121000 Manihot esculenta HOM05D008235 ORTHO05D009358 2.3e-33 147.9 580 29.0
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 5.6e-32 143.3 526 25.7
MD04G1040900 Malus domestica HOM05D008235 ORTHO05D009358 9.6e-32 142.5 513 28.3
Gohir.D10G129000 Gossypium hirsutum HOM05D008235 ORTHO05D009358 3.7e-31 140.6 444 27.7
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 6.2e-31 139.8 445 27.2
CSS0022265 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 1.4e-30 138.7 582 27.3
Dinv22732 Davidia involucrata HOM05D008235 ORTHO05D009358 1.7e-28 131.7 479 27.8
CiPaw.01G099800 Carya illinoinensis HOM05D008235 ORTHO05D009358 3.2e-27 127.5 378 30.4
CSS0049607 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 6.0e-26 123.2 517 27.1
TAR365G0029 Trochodendron aralioides HOM05D008235 ORTHO05D009358 5.1e-25 120.2 522 25.3
Dinv44188 Davidia involucrata HOM05D008235 ORTHO05D009358 5.7e-24 116.7 559 24.9
Actinidia34601 Actinidia chinensis HOM05D008235 ORTHO05D009358 2.4e-22 111.3 480 25.4
Actinidia35979 Actinidia chinensis HOM05D008235 ORTHO05D009358 5.3e-22 110.2 482 25.9
COL.COLO4_07668 Corchorus olitorius HOM05D008235 ORTHO05D009358 9.0e-22 109.4 389 27.5
THA.LOC104803712 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 1.2e-21 109.0 501 26.5
THA.LOC104800392 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 4.5e-21 107.1 414 28.7
AL5G41340 Arabidopsis lyrata HOM05D009929 ORTHO05D009358 9.3e-19 99.4 506 26.3
AT3G59430 Arabidopsis thaliana HOM05D009929 ORTHO05D009358 1.8e-17 95.1 475 26.7
Lj3g0014084 Lotus japonicus HOM05D008235 ORTHO05D009358 3.0e-17 94.4 443 25.1
Thhalv10005962m.g Eutrema salsugineum HOM05D009929 ORTHO05D009358 1.1e-16 92.4 468 26.1
Lalb_Chr22g0352131 Lupinus albus HOM05D008235 ORTHO05D009358 1.9e-16 91.7 481 25.4
Carub.0005s2617 Capsella rubella HOM05D009929 ORTHO05D009358 2.4e-14 84.7 473 24.1
CsaV3_4G003430 Cucumis sativus L. HOM05D008235 ORTHO05D009358 9.1e-14 82.8 439 24.8
Sp5g03710 Schrenkiella parvula HOM05D009929 ORTHO05D009358 9.1e-14 82.8 384 26.3
Nn1g09629 Nelumbo nucifera HOM05D008235 ORTHO05D009358 1.2e-13 82.4 525 25.5
TAR636G0036 Trochodendron aralioides HOM05D008235 ORTHO05D009358 5.9e-13 80.1 375 22.7
GSVIVG01010760001 Vitis vinifera HOM05D008235 ORTHO05D009358 1.0e-12 79.3 398 24.9
Glyma.12G052200 Glycine max HOM05D008235 ORTHO05D009358 5.0e-12 77.0 438 25.8
Duzib151G0752 Durio zibethinus HOM05D008235 ORTHO05D009358 6.5e-12 76.6 145 40.0
Ca_20789_v3 Cicer arietinum L. HOM05D008235 ORTHO05D009358 8.5e-12 76.3 440 24.8
Phvul.011G054200 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 1.1e-11 75.9 439 23.9
ClCG07G015680 Citrullus lanatus HOM05D008235 ORTHO05D009358 3.2e-11 74.3 419 25.3
arahy.Tifrunner.gnm1.ann1.TK6P88 Arachis hypogaea HOM05D008235 ORTHO05D009358 9.4e-11 72.8 458 24.5
Rhsim09G0027400 Rhododendron simsii HOM05D008235 ORTHO05D009358 1.6e-10 72.0 127 29.9
RhsimUnG0195000 Rhododendron simsii HOM05D008235 ORTHO05D009358 1.6e-10 72.0 127 29.9
arahy.Tifrunner.gnm1.ann1.V6VI7P Arachis hypogaea HOM05D008235 ORTHO05D009358 2.1e-10 71.6 441 24.9
VMungo1127G1046 Vigna mungo HOM05D008235 ORTHO05D009358 2.7e-10 71.2 441 23.8
Glyma.11G127600 Glycine max HOM05D008235 ORTHO05D009358 1.0e-09 69.3 422 23.5
Aa31LG1G25120 Aethionema arabicum HOM05D009929 ORTHO05D006942 1.4e-09 68.9 207 31.9
TPR.G34237 Trifolium pratense HOM05D008235 ORTHO05D009358 3.0e-09 67.8 190 30.0
HanXRQChr03g0091101 Helianthus annuus HOM05D040109 ORTHO05D009358 1.5e-08 65.5 121 29.8
Oeu053824.1 Olea europaea HOM05D008235 ORTHO05D009358 1.5e-08 65.5 531 22.0
BcaC07g40472 Brassica carinata HOM05D009929 ORTHO05D009358 9.7e-08 62.8 199 27.6
BraA09t40607Z Brassica rapa HOM05D009929 ORTHO05D009358 9.7e-08 62.8 127 33.1
A09p51710 Brassica napus HOM05D009929 ORTHO05D009358 1.3e-07 62.4 125 33.6
BcaC07g40284 Brassica carinata HOM05D009929 ORTHO05D009358 6.3e-07 60.1 222 28.4
C08p34440 Brassica napus HOM05D009929 ORTHO05D009358 6.3e-07 60.1 222 28.4
BolC8t51045H Brassica oleracea HOM05D009929 ORTHO05D009358 6.3e-07 60.1 222 28.4
Medtr4g067260 Medicago truncatula HOM05D008235 ORTHO05D009358 1.4e-06 58.9 459 23.7
vmacro00622 Vaccinium macrocarpon HOM05D008235 ORTHO05D009358 2.4e-06 58.2 121 28.9
AUR62015381 Chenopodium quinoa HOM05D019141 ORTHO05D009358 3.1e-06 57.8 62 45.2
CARHR169830 Cardamine hirsuta HOM05D009929 ORTHO05D009358 4.1e-06 57.4 111 33.3
Eucgr.A00083 Eucalyptus grandis HOM05D008235 ORTHO05D009358 4.1e-06 57.4 86 37.2
PSO675G1581 Papaver somniferum HOM05D066249 ORTHO05D009358 4.1e-06 57.4 77 44.2
EL10Ac3g05943 Beta vulgaris HOM05D019141 ORTHO05D009358 5.3e-06 57.0 65 43.1
PSO017G5357 Papaver somniferum HOM05D066249 ORTHO05D009358 6.9e-06 56.6 77 42.9
Aqoxy2G04121 Aquilegia oxysepala HOM05D008235 ORTHO05D009358 9.1e-06 56.2 93 36.6
AUR62002309 Chenopodium quinoa HOM05D019141 ORTHO05D009358 9.1e-06 56.2 53 47.2


User provided reference genes

Program Settings