Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 5.3e-105 384.8 263 100.0
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 7.0e-81 304.7 197 75.6
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 9.1e-81 304.3 197 75.6
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 4.5e-80 302.0 199 73.4
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 7.7e-80 301.2 198 75.3
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 1.0e-79 300.8 200 74.0
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 1.2e-77 293.9 200 73.0
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 6.1e-77 291.6 192 74.5
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 8.0e-77 291.2 186 76.3
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.0e-76 290.8 195 73.3
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 1.8e-76 290.0 209 73.7
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 4.0e-76 288.9 201 73.1
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 5.2e-76 288.5 208 73.6
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 5.2e-76 288.5 193 72.5
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 6.8e-76 288.1 192 72.9
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.8e-76 288.1 192 73.4
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 6.8e-76 288.1 200 71.0
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.2e-75 287.3 195 72.3
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.2e-75 287.3 195 72.3
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.2e-75 287.3 192 73.4
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.2e-75 287.3 195 72.3
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 3.4e-75 285.8 195 71.3
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 4.4e-75 285.4 197 73.6
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 5.7e-75 285.0 201 69.7
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.8e-74 282.7 200 72.0
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 3.7e-74 282.3 192 73.4
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 4.8e-74 282.0 197 69.5
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 6.3e-74 281.6 203 67.5
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 8.3e-74 281.2 194 70.1
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 8.3e-74 281.2 201 70.1
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 8.3e-74 281.2 198 71.7
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.1e-73 280.8 199 71.9
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 2.0e-72 276.6 197 67.5
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 3.5e-72 275.8 192 68.8
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 3.5e-72 275.8 196 72.4
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 3.5e-72 275.8 202 73.3
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 5.9e-72 275.0 197 67.5
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 2.9e-71 272.7 196 67.3
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 6.5e-71 271.6 197 68.0
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 8.6e-71 271.2 200 67.0
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 1.1e-70 270.8 157 77.7
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 2.5e-70 269.6 197 68.5
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 5.5e-70 268.5 197 67.5
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 5.5e-70 268.5 196 69.4
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 5.5e-70 268.5 196 69.4
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 1.2e-69 267.3 198 67.2
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 1.6e-69 266.9 197 67.0
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 2.8e-69 266.2 192 66.7
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 3.6e-69 265.8 191 68.1
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 4.7e-69 265.4 197 64.5
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 4.7e-69 265.4 192 69.8
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 6.1e-69 265.0 198 66.2
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 1.8e-68 263.5 197 67.0
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 4.0e-68 262.3 199 64.8
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 2.0e-67 260.0 194 64.9
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 2.0e-67 260.0 191 65.4
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 2.6e-67 259.6 198 65.2
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 3.4e-67 259.2 177 71.8
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 4.4e-67 258.8 199 65.8
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 5.7e-67 258.5 191 68.1
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 1.3e-66 257.3 196 69.9
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 1.7e-66 256.9 198 63.6
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.7e-66 256.9 198 66.2
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 3.7e-66 255.8 196 63.3
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 4.9e-66 255.4 151 80.8
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 1.1e-65 254.2 191 64.9
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 1.4e-65 253.8 192 63.0
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 1.8e-65 253.4 156 74.4
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 2.4e-65 253.1 192 63.0
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 3.1e-65 252.7 153 77.1
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 3.1e-65 252.7 197 64.5
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 3.5e-64 249.2 198 63.1
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 1.0e-63 247.7 199 66.3
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 1.3e-63 247.3 193 63.2
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 1.7e-63 246.9 199 62.8
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 2.3e-63 246.5 196 68.4
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 5.0e-63 245.4 196 62.2
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 1.1e-62 244.2 198 67.7
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 2.5e-62 243.0 202 59.4
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 3.3e-62 242.7 147 77.6
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 7.3e-62 241.5 192 61.5
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 1.2e-61 240.7 211 59.7
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 1.2e-61 240.7 147 76.9
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 2.1e-61 240.0 197 64.5
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 1.2e-59 234.2 197 61.4
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 1.5e-59 233.8 198 60.6
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.5e-59 233.8 216 58.3
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 2.0e-59 233.4 193 62.7
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 2.0e-59 233.4 198 60.1
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 2.6e-59 233.0 198 60.6
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 7.5e-59 231.5 199 60.8
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 7.5e-59 231.5 196 57.7
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 9.8e-59 231.1 194 60.8
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 1.7e-58 230.3 193 61.1
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 1.7e-58 230.3 199 62.3
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 2.2e-58 229.9 199 60.3
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 2.9e-58 229.6 191 62.3
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 3.7e-58 229.2 190 62.6
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 3.7e-58 229.2 197 59.9
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 6.4e-58 228.4 195 62.1
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 6.4e-58 228.4 195 62.1
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 6.4e-58 228.4 195 62.1
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 6.4e-58 228.4 197 58.9
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 8.3e-58 228.0 193 61.1
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 2.0e-56 223.4 197 57.9
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 1.1e-54 217.6 161 65.2
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 2.8e-53 213.0 128 76.6
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 4.0e-52 209.1 150 64.7
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 4.3e-46 189.1 183 51.4
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 1.6e-45 187.2 155 56.8
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 2.3e-44 183.3 156 54.5
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 2.6e-43 179.9 192 54.7
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 2.2e-42 176.8 151 57.0
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 2.9e-42 176.4 198 49.5
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 5.4e-41 172.2 151 55.0
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 1.9e-38 163.7 157 50.3
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 4.3e-38 162.5 141 55.3
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 7.6e-35 151.8 153 48.4
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 1.1e-33 147.9 197 42.1
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 1.3e-31 141.0 119 59.7
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 1.7e-31 140.6 151 45.7
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 3.5e-24 116.3 110 55.5


User provided reference genes

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