Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 1.4e-70 269.6 150 100.0
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 1.9e-51 206.1 130 81.5
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 4.3e-51 204.9 125 82.4
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 4.3e-51 204.9 125 83.2
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 2.8e-50 202.2 125 80.8
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 2.8e-50 202.2 130 80.8
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.6e-50 201.8 130 80.0
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 3.6e-50 201.8 131 81.7
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 6.2e-50 201.1 131 80.9
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 6.2e-50 201.1 131 78.6
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 1.1e-49 200.3 135 77.0
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 1.8e-49 199.5 125 83.2
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 3.1e-49 198.7 128 81.2
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 3.1e-49 198.7 130 78.5
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 4.0e-49 198.4 125 82.4
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 4.0e-49 198.4 125 82.4
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 4.0e-49 198.4 132 80.3
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 5.2e-49 198.0 130 78.5
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 6.9e-49 197.6 125 81.6
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 1.2e-48 196.8 130 79.2
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 2.0e-48 196.1 131 78.6
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 2.0e-48 196.1 131 78.6
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 2.0e-48 196.1 131 80.2
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 2.6e-48 195.7 137 77.4
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 3.4e-48 195.3 137 76.6
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.4e-48 195.3 130 76.9
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 3.4e-48 195.3 138 74.6
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 3.4e-48 195.3 130 80.0
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 4.4e-48 194.9 125 80.8
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 4.4e-48 194.9 127 79.5
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 4.4e-48 194.9 136 77.9
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 9.9e-48 193.7 131 78.6
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 9.9e-48 193.7 125 79.2
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 9.9e-48 193.7 131 77.9
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 1.3e-47 193.4 130 79.2
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.3e-47 193.4 125 79.2
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 2.2e-47 192.6 125 80.0
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 4.9e-47 191.4 125 78.4
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 6.4e-47 191.0 116 85.3
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 8.4e-47 190.7 133 78.9
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 8.4e-47 190.7 118 83.1
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 1.1e-46 190.3 130 76.9
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 1.1e-46 190.3 110 88.2
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 1.9e-46 189.5 132 74.2
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 2.4e-46 189.1 137 73.0
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 2.4e-46 189.1 136 77.2
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 2.4e-46 189.1 131 77.9
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 3.2e-46 188.7 119 80.7
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 3.2e-46 188.7 119 80.7
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 3.2e-46 188.7 130 77.7
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 4.2e-46 188.3 135 73.3
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 4.2e-46 188.3 130 76.9
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 4.2e-46 188.3 124 80.6
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 5.4e-46 188.0 119 80.7
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 7.1e-46 187.6 131 74.0
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 9.3e-46 187.2 149 68.5
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 1.2e-45 186.8 122 78.7
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 2.1e-45 186.0 119 79.0
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 2.7e-45 185.7 135 74.1
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 4.6e-45 184.9 135 73.3
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 4.6e-45 184.9 127 75.6
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 4.6e-45 184.9 135 73.3
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 6.0e-45 184.5 122 76.2
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 1.0e-44 183.7 120 77.5
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 1.0e-44 183.7 136 72.8
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 1.0e-44 183.7 122 75.4
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 1.0e-44 183.7 119 79.0
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.3e-44 183.3 125 74.4
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 2.3e-44 182.6 131 74.8
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 3.0e-44 182.2 135 72.6
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 3.9e-44 181.8 158 67.1
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 3.9e-44 181.8 134 71.6
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 5.1e-44 181.4 131 72.5
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 5.1e-44 181.4 132 70.5
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 5.1e-44 181.4 132 70.5
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 5.1e-44 181.4 134 73.1
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 6.6e-44 181.0 132 72.7
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 8.7e-44 180.6 122 74.6
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 1.5e-43 179.9 135 72.6
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 1.9e-43 179.5 134 73.1
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 2.5e-43 179.1 128 74.2
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 2.5e-43 179.1 134 70.1
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 9.6e-43 177.2 119 75.6
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 1.3e-42 176.8 136 73.5
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 1.6e-42 176.4 134 70.9
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 8.1e-42 174.1 132 71.2
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 8.1e-42 174.1 134 70.9
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 1.1e-41 173.7 119 74.8
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 2.4e-41 172.6 130 70.0
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 4.0e-41 171.8 131 67.2
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 5.3e-41 171.4 127 70.9
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.6e-40 169.1 134 70.9
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 3.4e-40 168.7 119 73.1
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 7.6e-40 167.5 130 69.2
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 4.9e-39 164.9 119 72.3
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 2.1e-37 159.5 118 66.9
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 4.6e-37 158.3 130 63.8
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 2.3e-36 156.0 118 71.2
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 7.4e-35 151.0 135 63.0
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 1.8e-33 146.4 127 63.0
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 2.6e-32 142.5 115 67.0
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 1.3e-31 140.2 95 77.9
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 1.7e-31 139.8 130 60.8
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 2.2e-31 139.4 93 76.3
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 2.2e-31 139.4 117 60.7
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 4.9e-31 138.3 129 63.6
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 6.4e-31 137.9 130 60.0
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 8.4e-31 137.5 130 60.0
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 1.1e-30 137.1 130 59.2
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 1.1e-30 137.1 132 59.1
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 1.4e-30 136.7 130 59.2
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 1.9e-30 136.3 98 72.4
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 2.4e-30 136.0 132 59.8
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 3.2e-30 135.6 85 82.4
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 3.2e-30 135.6 130 58.5
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 4.2e-30 135.2 130 60.0
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 5.5e-30 134.8 83 83.1
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 1.6e-29 133.3 117 59.0
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 1.0e-28 130.6 133 56.4
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 5.1e-28 128.3 151 51.7
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 1.1e-27 127.1 84 78.6
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 8.2e-26 120.9 77 76.6
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 3.1e-25 119.0 68 83.8
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 6.9e-25 117.9 159 47.2
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 2.6e-24 115.9 125 53.6
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 4.9e-23 111.7 85 69.4
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 1.4e-22 110.2 73 78.1
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 1.5e-19 100.1 117 45.3
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 2.5e-14 82.8 111 46.8
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 1.2e-13 80.5 84 57.1
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 1.0e-12 77.4 114 44.7
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 8.8e-12 74.3 85 50.6
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 4.1e-09 65.5 41 75.6
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 2.6e-08 62.8 48 64.6
C06p20730 Brassica napus HOM05D005449 ORTHO05D027985 5.5e-06 55.1 66 47.0
BolC6t37256H Brassica oleracea HOM05D005449 ORTHO05D027985 5.5e-06 55.1 66 47.0
Aa31LG10G7880 Aethionema arabicum HOM05D005449 ORTHO05D006916 7.2e-06 54.7 74 47.3


User provided reference genes

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