Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 2.6e-113 412.1 222 100.0
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 8.5e-80 300.8 225 68.4
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.5e-79 300.1 217 70.0
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 2.7e-78 295.8 219 69.9
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 6.1e-78 294.7 216 74.5
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.0e-77 293.9 217 67.7
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 2.3e-77 292.7 205 70.7
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 1.1e-76 290.4 231 68.4
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 7.5e-76 287.7 215 67.9
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 2.8e-75 285.8 216 66.2
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 8.2e-75 284.3 191 72.8
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.1e-74 283.9 188 73.9
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 1.1e-74 283.9 186 76.3
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 2.4e-74 282.7 223 66.4
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 2.4e-74 282.7 211 68.7
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 2.4e-74 282.7 230 67.4
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 3.1e-74 282.3 196 73.5
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 3.1e-74 282.3 194 74.7
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 3.1e-74 282.3 187 74.9
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 4.1e-74 282.0 187 75.4
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 4.1e-74 282.0 223 66.8
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.6e-73 280.0 230 67.0
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 2.0e-73 279.6 204 71.1
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 2.0e-73 279.6 227 65.2
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 2.7e-73 279.3 186 74.7
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 7.7e-73 277.7 186 74.2
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 1.3e-72 276.9 189 74.6
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 1.7e-72 276.6 202 69.8
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 6.5e-72 274.6 145 89.0
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.1e-71 273.9 201 71.1
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 1.1e-71 273.9 203 69.5
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 1.5e-71 273.5 186 74.2
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.9e-71 273.1 201 71.1
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.9e-71 273.1 143 92.3
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 3.2e-71 272.3 195 69.2
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 4.2e-71 271.9 190 70.0
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 5.5e-71 271.6 146 86.3
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 7.2e-71 271.2 196 69.9
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 7.2e-71 271.2 209 66.0
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 9.4e-71 270.8 216 63.9
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 9.4e-71 270.8 203 67.5
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 1.2e-70 270.4 193 70.5
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.7e-70 269.2 186 80.1
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 3.6e-70 268.9 142 89.4
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 1.0e-69 267.3 188 69.7
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 1.4e-69 266.9 201 74.6
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 2.3e-69 266.2 188 72.9
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 2.3e-69 266.2 216 64.4
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 5.2e-69 265.0 143 84.6
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 6.8e-69 264.6 203 66.5
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 8.8e-69 264.2 188 71.8
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.5e-68 263.5 200 66.0
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.0e-68 263.1 172 73.8
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 2.6e-68 262.7 142 85.2
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 2.6e-68 262.7 142 86.6
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 5.7e-68 261.5 181 79.0
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 7.5e-68 261.2 146 82.2
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 7.5e-68 261.2 192 69.3
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 9.8e-68 260.8 180 72.8
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 1.7e-67 260.0 227 60.8
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.2e-67 259.6 189 69.3
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.2e-67 259.6 189 69.3
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 2.8e-67 259.2 172 74.4
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 3.7e-67 258.8 145 84.1
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 4.8e-67 258.5 143 83.9
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 4.8e-67 258.5 184 77.2
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 4.8e-67 258.5 172 73.8
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 6.3e-67 258.1 143 83.9
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 6.3e-67 258.1 184 69.6
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 8.3e-67 257.7 221 68.8
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 8.3e-67 257.7 218 60.6
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 8.3e-67 257.7 180 72.8
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 1.1e-66 257.3 172 70.9
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 1.1e-66 257.3 218 62.8
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.4e-66 256.1 137 88.3
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 3.1e-66 255.8 140 85.0
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 4.1e-66 255.4 218 61.9
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 9.1e-66 254.2 193 67.9
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 9.1e-66 254.2 193 67.9
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 9.1e-66 254.2 217 61.3
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 2.7e-65 252.7 217 61.8
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 1.0e-64 250.8 178 70.8
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 2.2e-64 249.6 133 88.7
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 2.9e-64 249.2 193 65.8
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 1.9e-63 246.5 215 63.7
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 4.2e-63 245.4 129 89.9
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 4.2e-63 245.4 174 77.6
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 7.2e-63 244.6 181 68.5
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 1.6e-62 243.4 128 90.6
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 1.4e-61 240.4 139 79.9
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 8.8e-61 237.7 139 76.3
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 2.8e-59 232.6 142 72.5
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 1.8e-58 229.9 195 62.1
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 4.1e-58 228.8 219 53.0
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 1.7e-51 206.8 141 68.8
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 6.8e-45 184.9 98 85.7
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 3.4e-44 182.6 90 92.2
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 1.1e-42 177.6 130 63.8
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 5.4e-42 175.3 177 53.7
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 1.5e-39 167.2 137 54.7
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 1.6e-38 163.7 180 53.9
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 8.1e-38 161.4 165 58.8
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 1.1e-37 161.0 136 61.0
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.6e-33 147.1 75 86.7
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 1.6e-33 147.1 78 88.5
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 3.5e-33 146.0 135 56.3
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 1.3e-32 144.1 107 67.3
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 5.1e-32 142.1 152 52.0
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 5.1e-32 142.1 77 83.1
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 2.1e-30 136.7 79 84.8
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 6.2e-30 135.2 72 88.9
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 6.0e-25 118.6 68 77.9
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.4e-21 107.5 56 85.7


User provided reference genes

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