Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 0.0e+00 1177.9 582 100.0
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 3.8e-172 609.0 586 55.6
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 5.5e-171 605.1 582 55.0
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.1e-170 603.2 584 54.6
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 4.7e-170 602.1 584 54.8
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 6.1e-170 601.7 587 54.0
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 1.5e-168 597.0 593 54.1
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 3.5e-165 585.9 588 54.6
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 3.8e-164 582.4 592 53.5
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.5e-163 580.5 597 51.1
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 2.3e-161 573.2 593 52.8
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 2.3e-161 573.2 582 52.6
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 1.7e-159 567.0 577 51.6
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 6.3e-159 565.1 586 51.5
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 6.3e-159 565.1 607 49.9
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 2.5e-155 553.1 575 51.7
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 4.3e-155 552.4 595 51.1
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 9.5e-155 551.2 577 50.8
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 2.1e-154 550.1 582 50.3
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.1e-154 550.1 584 51.9
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 1.0e-153 547.7 574 49.7
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 1.4e-150 537.3 577 48.4
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 4.1e-150 535.8 577 48.4
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.6e-149 533.9 606 48.5
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 6.6e-148 528.5 578 48.8
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 3.3e-147 526.2 607 46.6
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 1.2e-146 524.2 529 53.7
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 1.8e-145 520.4 533 50.8
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.0e-144 516.9 578 48.6
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 2.2e-143 513.5 574 49.1
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 1.4e-142 510.8 583 48.7
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 7.0e-142 508.4 574 49.7
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 5.0e-140 502.3 580 48.6
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 5.0e-140 502.3 584 47.8
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 6.6e-140 501.9 589 46.5
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 8.6e-140 501.5 589 47.7
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 1.1e-139 501.1 578 45.2
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 1.1e-139 501.1 583 47.7
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.3e-139 499.6 589 47.0
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 4.3e-139 499.2 585 48.2
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 2.3e-137 493.4 590 47.3
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 2.0e-136 490.3 596 48.0
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 9.9e-136 488.0 570 47.0
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 2.2e-135 486.9 592 46.3
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.6e-133 480.7 597 45.1
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 7.8e-133 478.4 578 45.8
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 8.6e-132 474.9 586 44.9
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 1.1e-131 474.6 584 46.4
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 4.3e-131 472.6 579 46.1
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.6e-130 470.7 574 44.3
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 2.1e-130 470.3 578 46.2
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 2.1e-130 470.3 578 46.2
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 3.6e-130 469.5 580 46.2
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 6.2e-130 468.8 577 45.8
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 8.1e-130 468.4 607 44.2
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 1.1e-129 468.0 592 45.1
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 1.8e-129 467.2 578 45.8
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 1.2e-128 464.5 577 44.7
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 2.0e-128 463.8 581 45.4
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 2.0e-128 463.8 587 44.3
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 4.4e-128 462.6 580 45.5
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 4.9e-127 459.1 577 45.4
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 8.4e-127 458.4 582 44.7
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 2.1e-125 453.8 593 42.0
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 1.3e-124 451.1 586 43.9
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 3.3e-123 446.4 582 43.8
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 9.0e-121 438.3 563 43.9
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 9.0e-121 438.3 587 45.3
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 5.8e-120 435.6 586 40.6
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 7.6e-120 435.3 592 44.1
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 3.8e-119 433.0 592 40.7
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 3.8e-119 433.0 590 43.1
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 4.9e-119 432.6 585 43.6
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 8.4e-119 431.8 585 43.2
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.1e-118 431.4 611 42.7
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 9.3e-118 428.3 591 43.8
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 9.3e-118 428.3 583 43.4
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 3.5e-117 426.4 593 42.0
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 1.0e-116 424.9 590 42.5
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 2.5e-115 420.2 571 42.7
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 2.5e-115 420.2 455 49.0
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 1.4e-113 414.5 584 40.6
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.2e-112 411.4 588 40.6
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 3.4e-112 409.8 583 42.4
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 4.9e-111 406.0 585 41.2
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 6.4e-111 405.6 420 50.7
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 9.6e-107 391.7 420 49.0
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 9.9e-104 381.7 412 50.5
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 2.3e-100 370.5 415 47.5
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 9.6e-99 365.2 443 46.5
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 6.2e-98 362.5 592 35.8
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 1.3e-90 338.2 545 39.3
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 1.4e-89 334.7 574 37.8
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 1.5e-88 331.3 599 36.6
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 6.5e-87 325.9 445 43.1
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 3.2e-86 323.6 586 38.6
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 2.5e-83 313.9 367 49.3
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.6e-77 294.7 417 40.5
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.2e-64 251.9 263 50.2
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 2.0e-64 251.1 231 51.5
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 4.7e-53 213.4 647 27.5
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.4e-52 211.8 190 56.3
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 2.8e-50 204.1 521 31.1
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 8.6e-47 192.6 627 26.8
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 4.0e-44 183.7 579 26.8
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.5e-38 164.5 141 56.7
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 7.3e-38 162.9 134 57.5
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 5.8e-35 153.3 458 24.0
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.7e-34 151.8 130 56.9
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 3.3e-30 137.5 153 49.0
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 7.3e-30 136.3 141 48.2
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 8.0e-29 132.9 188 39.9
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 1.7e-23 115.2 162 44.4
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 3.7e-18 97.4 333 26.1
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 2.8e-13 81.3 86 50.0
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 1.1e-12 79.3 136 30.9
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 4.4e-11 73.9 75 46.7
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 1.1e-06 59.3 43 65.1
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.1e-06 59.3 78 39.7


User provided reference genes

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