Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 8.8e-160 567.0 308 100.0
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 1.6e-89 333.6 315 62.5
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 4.2e-85 318.9 313 61.3
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 2.7e-84 316.2 313 60.1
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 6.0e-84 315.1 315 61.0
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 4.3e-82 308.9 317 60.9
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 4.3e-82 308.9 307 59.6
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.3e-81 307.4 316 59.5
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 1.6e-81 307.0 310 60.6
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.6e-81 307.0 316 59.8
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 1.6e-81 307.0 310 60.0
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 2.2e-81 306.6 316 59.8
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 8.2e-81 304.7 303 61.7
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 3.1e-80 302.8 314 61.1
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 5.3e-80 302.0 315 59.0
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.2e-79 300.8 311 59.5
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 4.5e-79 298.9 311 60.1
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 1.0e-78 297.7 313 57.2
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.3e-78 297.4 293 61.1
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 1.7e-78 297.0 296 61.8
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 2.2e-78 296.6 313 56.9
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 6.5e-78 295.0 316 57.9
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 3.6e-76 289.3 315 57.5
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 3.9e-75 285.8 293 61.1
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 6.7e-75 285.0 315 57.8
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 1.5e-74 283.9 300 61.3
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 1.4e-72 277.3 308 57.8
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 3.1e-72 276.2 302 59.3
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 3.1e-72 276.2 294 58.8
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 3.4e-71 272.7 304 60.2
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 5.9e-71 271.9 294 55.1
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 1.0e-70 271.2 296 56.8
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 1.0e-70 271.2 315 54.9
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 1.3e-70 270.8 318 55.0
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.3e-70 270.8 295 56.3
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 3.8e-70 269.2 297 56.6
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 3.8e-70 269.2 294 59.2
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 6.5e-70 268.5 315 56.5
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 6.5e-70 268.5 302 57.9
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 8.5e-70 268.1 315 53.0
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 1.9e-69 266.9 258 60.5
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 1.6e-68 263.8 313 52.7
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 2.1e-68 263.5 299 57.5
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 1.1e-64 251.1 316 54.4
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 1.1e-64 251.1 296 56.1
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 1.4e-64 250.8 316 53.2
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 7.0e-64 248.4 289 57.8
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 3.5e-63 246.1 292 54.8
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 3.5e-63 246.1 291 52.9
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 1.0e-62 244.6 257 61.1
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 1.7e-62 243.8 292 53.1
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 5.5e-61 238.8 316 51.6
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 3.6e-60 236.1 254 60.2
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 3.0e-59 233.0 293 51.2
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 1.3e-57 227.6 301 51.8
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 1.8e-56 223.8 301 51.2
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 2.0e-55 220.3 311 47.6
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 2.2e-54 216.9 314 46.5
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 2.2e-54 216.9 320 49.7
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 3.8e-54 216.1 310 46.5
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.1e-53 214.5 276 52.5
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 2.5e-53 213.4 310 46.8
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 7.2e-53 211.8 304 48.0
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 9.4e-53 211.5 310 46.5
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.6e-52 210.7 254 52.0
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 2.1e-52 210.3 277 54.2
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 2.7e-52 209.9 310 46.8
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 6.1e-52 208.8 312 48.4
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 6.1e-52 208.8 312 48.4
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 6.1e-52 208.8 313 46.3
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 5.2e-51 205.7 232 56.9
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.5e-50 204.1 261 49.8
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 1.5e-50 204.1 311 46.9
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 3.3e-50 203.0 308 45.8
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 7.5e-50 201.8 311 45.0
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 9.7e-50 201.4 306 46.1
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 1.3e-49 201.1 309 45.6
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 1.7e-49 200.7 309 45.3
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 2.2e-49 200.3 294 45.9
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 8.3e-49 198.4 291 49.5
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 2.4e-48 196.8 294 46.3
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 2.0e-47 193.7 257 51.8
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 4.5e-47 192.6 293 45.1
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 4.5e-47 192.6 313 45.0
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 4.5e-47 192.6 261 45.2
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 5.9e-47 192.2 256 49.6
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 1.0e-46 191.4 264 50.4
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 1.5e-45 187.6 271 43.9
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 8.8e-43 178.3 265 50.2
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.3e-41 174.5 270 43.0
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 4.8e-41 172.6 235 46.8
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 1.1e-40 171.4 230 55.2
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 3.5e-39 166.4 210 55.7
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 3.3e-37 159.8 228 47.4
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 1.0e-35 154.8 254 42.9
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 2.3e-35 153.7 245 44.9
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 4.4e-34 149.4 204 44.1
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 3.7e-33 146.4 215 43.7
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.4e-32 144.4 214 46.3
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 9.2e-32 141.7 188 44.7
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 2.3e-30 137.1 260 40.0
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 9.5e-29 131.7 79 86.1
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 1.6e-28 131.0 196 42.3
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 2.1e-20 104.0 308 32.8
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 2.6e-18 97.1 61 82.0
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 4.9e-17 92.8 174 44.8
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 7.0e-16 89.0 264 29.2
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 1.2e-15 88.2 268 32.1
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 8.6e-14 82.0 244 31.1
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 3.3e-13 80.1 238 32.8
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 8.1e-12 75.5 318 33.0
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 1.4e-11 74.7 229 34.9
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.4e-11 74.7 129 36.4
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 2.3e-11 73.9 142 38.7
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 4.0e-11 73.2 249 32.5
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 5.8e-10 69.3 77 62.3
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 2.9e-09 67.0 288 30.2
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 1.2e-07 61.6 299 26.4
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.5e-07 60.1 60 50.0


User provided reference genes

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