Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc88.35 Carica papaya HOM05D001571 ORTHO05D002889 1.5e-46 189.1 91 100.0
Thhalv10018379m.g Eutrema salsugineum HOM05D001571 ORTHO05D002889 1.0e-18 96.7 87 55.2
Oeu034727.1 Olea europaea HOM05D001571 ORTHO05D002889 1.3e-18 96.3 85 55.3
AT1G65590 Arabidopsis thaliana HOM05D001571 ORTHO05D002889 1.7e-18 95.9 87 54.0
A07p32900 Brassica napus HOM05D001571 ORTHO05D002889 3.8e-18 94.7 87 54.0
C06p39120 Brassica napus HOM05D001571 ORTHO05D002889 3.8e-18 94.7 87 54.0
BolC6t39005H Brassica oleracea HOM05D001571 ORTHO05D002889 3.8e-18 94.7 87 54.0
BraA07t30916Z Brassica rapa HOM05D001571 ORTHO05D002889 3.8e-18 94.7 87 54.0
Carub.0002s1142 Capsella rubella HOM05D001571 ORTHO05D002889 3.8e-18 94.7 87 54.0
CARHR057340 Cardamine hirsuta HOM05D001571 ORTHO05D002889 1.4e-17 92.8 87 52.9
AL2G22550 Arabidopsis lyrata HOM05D001571 ORTHO05D002889 1.9e-17 92.4 87 50.6
Sp5g20510 Schrenkiella parvula HOM05D001571 ORTHO05D002889 3.2e-17 91.7 86 53.5
Lj1C573G6 Lonicera japonica HOM05D001571 ORTHO05D002889 5.5e-17 90.9 84 50.0
Cfa002310 Carpinus fangiana HOM05D001571 ORTHO05D002889 7.2e-17 90.5 85 49.4
Dinv17156 Davidia involucrata HOM05D001571 ORTHO05D002889 9.3e-17 90.1 85 49.4
Nitab4.5_0001653g0030 Nicotiana tabacum HOM05D001571 ORTHO05D002889 2.1e-16 89.0 85 49.4
Haze_24515 Corylus avellana HOM05D001571 ORTHO05D002889 2.7e-16 88.6 85 48.2
Gohir.A01G123900 Gossypium hirsutum HOM05D001571 ORTHO05D002889 4.6e-16 87.8 80 52.5
Actinidia34704 Actinidia chinensis HOM05D001571 ORTHO05D002889 6.1e-16 87.4 84 46.4
Gohir.D01G111601 Gossypium hirsutum HOM05D001571 ORTHO05D002889 6.1e-16 87.4 79 51.9
Gorai.002G136400 Gossypium raimondii HOM05D001571 ORTHO05D002889 6.1e-16 87.4 79 51.9
Duzib128G1151 Durio zibethinus HOM05D001571 ORTHO05D002889 7.9e-16 87.0 80 50.0
Hma1.2p1_1218F.1_g267650 Hydrangea macrophylla HOM05D001571 ORTHO05D002889 7.9e-16 87.0 85 48.2
vmacro10421 Vaccinium macrocarpon HOM05D001571 ORTHO05D002889 1.0e-15 86.7 85 47.1
Thecc.05G131200 Theobroma cacao HOM05D001571 ORTHO05D002889 3.0e-15 85.1 84 50.0
AUR62006602 Chenopodium quinoa HOM05D001571 ORTHO05D002889 3.9e-15 84.7 85 48.2
Duzib128G1493 Durio zibethinus HOM05D001571 ORTHO05D002889 5.1e-15 84.3 80 48.8
DCAR_023905 Daucus carota HOM05D001571 ORTHO05D002889 6.7e-15 84.0 85 42.4
Ah.06g195130 Amaranthus hybridus HOM05D001571 ORTHO05D002889 8.8e-15 83.6 85 47.1
Ciclev10014808m.g Citrus clementina HOM05D001571 ORTHO05D002889 8.8e-15 83.6 82 50.0
COL.COLO4_22779 Corchorus olitorius HOM05D001571 ORTHO05D002889 1.1e-14 83.2 82 50.0
Peaxi162Scf29894g00007 Petunia axillaris HOM05D001571 ORTHO05D002889 1.1e-14 83.2 85 44.7
Rhsim09G0127900 Rhododendron simsii HOM05D001571 ORTHO05D002889 1.1e-14 83.2 85 45.9
Sabra08G0059100 Salix brachista HOM05D001571 ORTHO05D002889 1.5e-14 82.8 85 47.1
CSS0003036 Camellia sinensis var. sinensis HOM05D001571 ORTHO05D002889 1.9e-14 82.4 85 45.9
CiPaw.04G180500 Carya illinoinensis HOM05D001571 ORTHO05D002889 1.9e-14 82.4 86 45.3
Nitab4.5_0001677g0100 Nicotiana tabacum HOM05D001571 ORTHO05D002889 1.9e-14 82.4 85 47.1
Solyc11g008810.2 Solanum lycopersicum HOM05D001571 ORTHO05D002889 1.9e-14 82.4 85 45.9
EL10Ac4g10043 Beta vulgaris HOM05D001571 ORTHO05D002889 2.5e-14 82.0 84 48.8
COL.COLO4_22777 Corchorus olitorius HOM05D001571 ORTHO05D002889 2.5e-14 82.0 77 53.2
Sopen11g004590 Solanum pennellii HOM05D001571 ORTHO05D002889 2.5e-14 82.0 85 45.9
Potri.008G079400 Populus trichocarpa HOM05D001571 ORTHO05D002889 3.3e-14 81.6 85 45.9
Atru.chr10.129 Acer truncatum HOM05D001571 ORTHO05D002889 4.3e-14 81.3 82 48.8
Atru.chr10.130 Acer truncatum HOM05D001571 ORTHO05D002889 4.3e-14 81.3 82 48.8
Atru.chr10.132 Acer truncatum HOM05D001571 ORTHO05D002889 4.3e-14 81.3 82 48.8
CsaV3_2G009420 Cucumis sativus L. HOM05D001571 ORTHO05D002889 5.7e-14 80.9 83 47.0
QL01p051860 Quercus lobata HOM05D001571 ORTHO05D002889 5.7e-14 80.9 85 42.4
RhsimUnG0038100 Rhododendron simsii HOM05D001571 ORTHO05D002889 7.4e-14 80.5 85 44.7
RhsimUnG0108400 Rhododendron simsii HOM05D001571 ORTHO05D002889 7.4e-14 80.5 85 44.7
Hund07393 Selenicereus undatus HOM05D001571 ORTHO05D002889 7.4e-14 80.5 87 43.7
PGSC0003DMG400016240 Solanum tuberosum HOM05D001571 ORTHO05D002889 9.7e-14 80.1 85 43.5
MELO3C008768.2 Cucumis melo HOM05D001571 ORTHO05D002889 1.3e-13 79.7 83 45.8
ECA238G4792 Erigeron canadensis HOM05D000915 ORTHO05D004661 1.3e-13 79.7 84 44.0
RhsimUnG0038300 Rhododendron simsii HOM05D001571 ORTHO05D002889 1.3e-13 79.7 85 44.7
SalBow1G3071 Salvia bowleyana HOM05D001571 ORTHO05D002889 1.3e-13 79.7 85 42.4
TAR654G0003 Trochodendron aralioides HOM05D001571 ORTHO05D002889 1.3e-13 79.7 84 45.2
Aqoxy1G01860 Aquilegia oxysepala HOM05D001571 ORTHO05D002889 1.7e-13 79.3 88 42.0
Migut.F02077 Erythranthe guttata HOM05D001571 ORTHO05D002889 1.7e-13 79.3 85 44.7
ClCG11G011060 Citrullus lanatus HOM05D001571 ORTHO05D002889 3.7e-13 78.2 83 47.0
TAR636G2423 Trochodendron aralioides HOM05D001571 ORTHO05D002889 3.7e-13 78.2 84 45.2
MSTRG.9233 Avicennia marina HOM05D001571 ORTHO05D002889 1.1e-12 76.6 85 44.7
Sed0014678 Sechium edule HOM05D001571 ORTHO05D002889 1.1e-12 76.6 83 45.8
CAN.G691.21 Capsicum annuum HOM05D001571 ORTHO05D002889 2.4e-12 75.5 84 42.9
SalBow1G6620 Salvia bowleyana HOM05D001571 ORTHO05D002889 2.4e-12 75.5 85 40.0
unitig_0.g2811 Utricularia gibba HOM05D001571 ORTHO05D002889 3.1e-12 75.1 85 40.0
Sc16g0010750 Simmondsia chinensis HOM05D001571 ORTHO05D002889 4.1e-12 74.7 85 40.0
PSO675G5555 Papaver somniferum HOM05D001571 ORTHO05D002889 5.3e-12 74.3 81 48.1
Sed0007647 Sechium edule HOM05D001571 ORTHO05D002889 9.1e-12 73.6 84 42.9
BcaB03g15328 Brassica carinata HOM05D001571 ORTHO05D002889 1.5e-11 72.8 67 58.2
Lj1C640G1 Lonicera japonica HOM05D001571 ORTHO05D002889 2.0e-11 72.4 85 41.2
PSO732G0537 Papaver somniferum HOM05D001571 ORTHO05D002889 2.0e-11 72.4 79 49.4
Aa31LG2G2560 Aethionema arabicum HOM05D001571 ORTHO05D002889 2.6e-11 72.0 83 42.2
Nn1g09497 Nelumbo nucifera HOM05D001571 ORTHO05D002889 2.6e-11 72.0 83 42.2
AUR62000255 Chenopodium quinoa HOM05D001571 ORTHO05D002889 4.5e-11 71.2 77 48.1
THA.LOC104805676 Tarenaya hassleriana HOM05D001571 ORTHO05D002889 7.7e-11 70.5 67 52.2
TWI53G1043 Tripterygium wilfordii HOM05D001571 ORTHO05D002889 7.7e-11 70.5 87 40.2
Cc00_g25060 Coffea canephora HOM05D001571 ORTHO05D002889 2.9e-10 68.6 84 38.1
HPP92_011711 Vanilla planifolia HOM05D001571 ORTHO05D002889 5.0e-10 67.8 88 39.8
TWI18G1160 Tripterygium wilfordii HOM05D001571 ORTHO05D002889 6.5e-10 67.4 89 40.4
PSO732G0499 Papaver somniferum HOM05D001571 ORTHO05D002889 1.4e-09 66.2 81 48.1
HanXRQChr14g0454971 Helianthus annuus HOM05D001571 ORTHO05D002889 4.2e-09 64.7 77 42.9
Nn7g37464 Nelumbo nucifera HOM05D001571 ORTHO05D002889 1.2e-08 63.2 84 40.5
Os01g0891000 Oryza sativa ssp. japonica HOM05D001571 ORTHO05D002889 2.1e-08 62.4 88 35.2
Zm00001eb288150 Zea mays HOM05D001571 ORTHO05D002889 2.1e-08 62.4 86 37.2
GSVIVG01004010001 Vitis vinifera HOM05D001571 ORTHO05D002889 6.1e-08 60.8 65 43.1
HanXRQChr05g0152141 Helianthus annuus HOM05D001571 ORTHO05D002889 5.7e-06 54.3 58 44.8


User provided reference genes

Program Settings