Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 4.9e-233 810.8 433 100.0
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 1.0e-89 334.7 576 40.3
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 1.3e-87 327.8 541 41.6
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 1.3e-84 317.8 579 37.7
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 5.5e-83 312.4 592 38.0
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 9.4e-83 311.6 620 37.1
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 8.0e-82 308.5 590 38.3
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.8e-81 307.4 583 37.0
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 6.7e-81 305.4 572 37.2
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.5e-80 304.3 590 38.8
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 2.6e-80 303.5 590 38.0
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 3.3e-80 303.1 572 37.1
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 3.3e-80 303.1 589 39.6
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 1.7e-79 300.8 572 36.7
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 4.8e-79 299.3 583 38.9
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 8.2e-79 298.5 586 36.3
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 5.3e-78 295.8 574 36.9
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 7.0e-78 295.4 573 40.1
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 2.0e-77 293.9 588 37.1
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.6e-77 293.5 566 37.6
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 2.6e-77 293.5 580 35.7
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 7.7e-77 292.0 607 35.7
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 1.3e-76 291.2 544 41.2
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 2.2e-76 290.4 558 38.2
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 2.2e-76 290.4 595 37.0
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 2.2e-76 290.4 586 35.8
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 3.8e-76 289.7 575 36.0
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 8.5e-76 288.5 572 38.3
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 2.5e-75 287.0 589 35.8
Cpa.g.c37190 Carica papaya HOM05D005855 ORTHO05D006406 3.2e-75 286.6 188 86.2
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 7.2e-75 285.4 576 35.9
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 8.0e-74 282.0 553 37.4
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.8e-73 280.8 562 37.0
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 5.2e-73 279.3 583 37.2
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 8.8e-73 278.5 590 37.6
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 1.2e-72 278.1 571 35.7
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 1.5e-72 277.7 591 34.3
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.5e-72 277.7 571 35.7
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 1.5e-72 277.7 542 36.2
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 2.0e-72 277.3 579 36.1
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 3.4e-72 276.6 568 35.9
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 5.7e-72 275.8 577 36.7
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 7.5e-72 275.4 569 35.5
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 7.5e-72 275.4 587 34.1
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 1.7e-71 274.2 569 35.3
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 2.2e-71 273.9 593 35.1
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 1.4e-70 271.2 580 35.0
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 2.0e-69 267.3 561 35.8
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 2.7e-69 266.9 277 53.8
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.3e-68 264.6 574 36.6
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 7.2e-67 258.8 559 36.5
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 7.2e-67 258.8 559 34.2
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 1.2e-66 258.1 562 34.0
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 1.2e-66 258.1 565 34.7
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 2.1e-66 257.3 580 34.3
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 2.7e-66 256.9 576 34.5
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 6.8e-65 252.3 572 33.4
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 1.5e-64 251.1 563 35.5
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 3.4e-64 250.0 586 34.1
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 3.4e-64 250.0 585 34.0
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 3.4e-64 250.0 585 33.2
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 7.5e-64 248.8 574 33.3
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 2.2e-63 247.3 574 36.1
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 4.9e-63 246.1 578 33.9
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 4.9e-63 246.1 583 37.0
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 6.3e-63 245.7 584 33.0
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 2.4e-62 243.8 593 32.4
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 4.1e-62 243.0 583 36.4
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 4.1e-62 243.0 559 34.9
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 4.1e-62 243.0 583 32.2
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 7.0e-62 242.3 497 35.4
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 4.5e-61 239.6 586 32.6
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 5.9e-61 239.2 566 33.2
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 1.0e-60 238.4 563 36.6
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 1.0e-60 238.4 583 31.9
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 8.6e-60 235.3 589 32.4
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 1.9e-59 234.2 593 32.7
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 4.2e-59 233.0 495 34.7
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 4.2e-59 233.0 495 34.7
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 1.2e-58 231.5 574 32.8
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 6.1e-58 229.2 589 32.3
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 1.4e-57 228.0 588 32.5
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 3.0e-57 226.9 492 34.6
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 4.0e-57 226.5 591 31.0
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 6.8e-57 225.7 251 53.4
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 6.8e-57 225.7 492 34.3
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 6.8e-57 225.7 246 52.8
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 4.4e-56 223.0 595 31.9
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 5.7e-56 222.6 523 34.8
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 7.5e-56 222.2 566 33.2
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 7.5e-56 222.2 616 30.8
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 1.7e-55 221.1 598 31.8
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 2.9e-55 220.3 594 31.6
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 1.1e-54 218.4 589 32.1
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 1.1e-54 218.4 591 31.6
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 1.1e-54 218.4 591 31.1
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 2.7e-53 213.8 559 32.9
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 6.6e-52 209.1 587 31.7
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 1.6e-50 204.5 579 32.1
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 4.7e-50 203.0 559 32.9
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 5.2e-49 199.5 580 29.5
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 5.8e-48 196.1 592 29.9
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 1.7e-47 194.5 244 47.5
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 6.2e-42 176.0 566 30.0
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 1.1e-35 155.2 636 26.6
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 7.3e-35 152.5 601 26.8
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 7.3e-35 152.5 631 26.6
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 9.5e-35 152.1 595 28.7
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 2.0e-32 144.4 268 36.9
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 4.4e-32 143.3 660 25.3
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 2.2e-31 141.0 159 49.7
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 8.4e-31 139.0 268 36.6
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 6.0e-29 132.9 610 26.2
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 8.6e-28 129.0 565 26.0
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 2.5e-27 127.5 153 47.7
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 5.6e-27 126.3 279 34.4
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 5.6e-27 126.3 559 25.4
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 2.2e-23 114.4 308 30.8
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 5.4e-22 109.8 526 25.5
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 2.7e-21 107.5 137 42.3
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 1.6e-18 98.2 293 28.0
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 3.4e-16 90.5 97 50.5
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 1.9e-14 84.7 282 31.6
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 5.4e-14 83.2 248 31.5
GSVIVG01007186001 Vitis vinifera HOM05D005855 ORTHO05D006406 9.3e-14 82.4 104 43.3
Nn8g40536 Nelumbo nucifera HOM05D005855 ORTHO05D006406 3.6e-10 70.5 72 45.8
Lju114A5T28 Lonicera japonica HOM05D005855 ORTHO05D006406 4.0e-09 67.0 159 34.6


User provided reference genes

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