Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc87.51 Carica papaya HOM05D001799 ORTHO05D001655 9.9e-65 250.0 127 100.0
Manes.13G038700 Manihot esculenta HOM05D001799 ORTHO05D001655 1.0e-24 117.1 119 52.9
Thecc.01G247900 Theobroma cacao HOM05D001799 ORTHO05D001655 3.2e-23 112.1 120 54.2
Gohir.D11G140300 Gossypium hirsutum HOM05D001799 ORTHO05D001655 1.2e-22 110.2 120 51.7
Gorai.007G150500 Gossypium raimondii HOM05D001799 ORTHO05D001655 1.2e-22 110.2 120 51.7
Manes.12G038900 Manihot esculenta HOM05D001799 ORTHO05D001655 2.1e-22 109.4 119 52.1
Duzib138G0086 Durio zibethinus HOM05D001799 ORTHO05D001655 2.7e-22 109.0 116 52.6
Duzib211G0692 Durio zibethinus HOM05D001799 ORTHO05D001655 4.6e-22 108.2 120 50.8
Duzib133G0885 Durio zibethinus HOM05D001799 ORTHO05D001655 6.0e-22 107.8 120 50.0
Gohir.A08G046000 Gossypium hirsutum HOM05D001799 ORTHO05D001655 7.9e-22 107.5 121 49.6
Gohir.A11G134200 Gossypium hirsutum HOM05D001799 ORTHO05D001655 1.3e-21 106.7 120 51.7
Gorai.004G057600 Gossypium raimondii HOM05D001799 ORTHO05D001655 1.8e-21 106.3 121 47.9
TAR349G0003 Trochodendron aralioides HOM05D001799 ORTHO05D001655 2.3e-21 105.9 117 51.3
Potri.002G255400 Populus trichocarpa HOM05D001799 ORTHO05D001655 3.9e-21 105.1 126 45.2
Nn3g19824 Nelumbo nucifera HOM05D001799 ORTHO05D001655 5.1e-21 104.8 117 50.4
Gohir.D08G056500 Gossypium hirsutum HOM05D001799 ORTHO05D001655 8.7e-21 104.0 121 47.1
TAR633G1919 Trochodendron aralioides HOM05D001799 ORTHO05D001655 4.1e-18 95.1 117 47.9
Actinidia09508 Actinidia chinensis HOM05D001799 ORTHO05D001655 2.0e-17 92.8 117 47.9
COL.COLO4_20962 Corchorus olitorius HOM05D001799 ORTHO05D001655 7.6e-17 90.9 120 47.5
MBI10_g26045_MAGBIO Magnolia biondii HOM05D001799 ORTHO05D001655 1.3e-16 90.1 118 46.6
Sabra02G0194000 Salix brachista HOM05D006210 ORTHO05D007510 1.7e-16 89.7 126 42.1
Atru.chr5.1957 Acer truncatum HOM05D001799 ORTHO05D001655 2.2e-16 89.4 117 50.4
Actinidia23705 Actinidia chinensis HOM05D001799 ORTHO05D001655 3.8e-16 88.6 118 50.8
Ciclev10019675m.g Citrus clementina HOM05D001799 ORTHO05D001655 3.8e-16 88.6 118 48.3
TWI75G0966 Tripterygium wilfordii HOM05D001799 ORTHO05D001655 3.8e-16 88.6 122 43.4
GSVIVG01028449001 Vitis vinifera HOM05D001799 ORTHO05D001655 5.0e-16 88.2 117 45.3
Oeu026802.3 Olea europaea HOM05D001799 ORTHO05D001655 8.5e-16 87.4 124 44.4
Prupe.8G213400 Prunus persica HOM05D001799 ORTHO05D001655 2.5e-15 85.9 119 47.1
vmacro02715 Vaccinium macrocarpon HOM05D001799 ORTHO05D001655 4.2e-15 85.1 126 46.0
Rhsim13G0040600 Rhododendron simsii HOM05D001799 ORTHO05D001655 7.2e-15 84.3 127 44.1
TWI18G0889 Tripterygium wilfordii HOM05D001799 ORTHO05D001655 7.2e-15 84.3 116 47.4
Cc01_g17690 Coffea canephora HOM05D001799 ORTHO05D001655 2.7e-14 82.4 121 44.6
CANSAT01G0634 Cannabis sativa HOM05D001799 ORTHO05D001655 3.6e-14 82.0 120 48.3
Dinv43054 Davidia involucrata HOM05D001799 ORTHO05D001655 4.6e-14 81.6 121 44.6
SalBow4G1659 Salvia bowleyana HOM05D001799 ORTHO05D001655 4.6e-14 81.6 129 40.3
Hma1.2p1_1224F.1_g268440 Hydrangea macrophylla HOM05D001799 ORTHO05D001655 7.9e-14 80.9 127 44.9
Haze_24720 Corylus avellana HOM05D001799 ORTHO05D001655 1.4e-13 80.1 118 47.5
CiPaw.03G272100 Carya illinoinensis HOM05D001799 ORTHO05D001655 1.8e-13 79.7 123 43.1
DCAR_000558 Daucus carota HOM05D001799 ORTHO05D001655 1.8e-13 79.7 128 41.4
Lsat_1_v5_gn_5_180101 Lactuca sativa HOM05D001799 ORTHO05D001655 1.8e-13 79.7 134 43.3
Cfa002496 Carpinus fangiana HOM05D006210 ORTHO05D007510 2.3e-13 79.3 112 45.5
MBI07_g23235_MAGBIO Magnolia biondii HOM05D001799 ORTHO05D001655 5.1e-13 78.2 120 42.5
RcHm_v2.0_Chr6g0286061 Rosa chinensis HOM05D001799 ORTHO05D001655 1.1e-12 77.0 120 42.5
Sopen09g025540 Solanum pennellii HOM05D001799 ORTHO05D001655 1.9e-12 76.3 131 42.7
Nn1g03020 Nelumbo nucifera HOM05D001799 ORTHO05D001655 2.5e-12 75.9 109 44.0
Oeu039650.1 Olea europaea HOM05D001799 ORTHO05D001655 2.5e-12 75.9 125 44.0
Actinidia37560 Actinidia chinensis HOM05D001799 ORTHO05D001655 1.3e-11 73.6 123 39.0
Migut.D00488 Erythranthe guttata HOM05D001799 ORTHO05D001655 1.3e-11 73.6 132 41.7
MD05G1186600 Malus domestica HOM05D001799 ORTHO05D001655 1.7e-11 73.2 126 43.7
arahy.Tifrunner.gnm1.ann1.XD4QRI Arachis hypogaea HOM05D001799 ORTHO05D001655 2.2e-11 72.8 121 41.3
arahy.Tifrunner.gnm1.ann1.2D12SM Arachis hypogaea HOM05D001799 ORTHO05D001655 2.8e-11 72.4 121 40.5
Aqoxy5G00108 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 6.3e-11 71.2 117 39.3
BraA09t36924Z Brassica rapa HOM05D001799 ORTHO05D001655 4.1e-10 68.6 117 41.0
Oeu052094.1 Olea europaea HOM05D001799 ORTHO05D001655 4.1e-10 68.6 125 38.4
Aa31LG8G17290 Aethionema arabicum HOM05D001799 ORTHO05D001655 5.3e-10 68.2 117 35.9
Ca_09641_v3 Cicer arietinum L. HOM05D001799 ORTHO05D001655 5.3e-10 68.2 120 40.0
PGSC0003DMG400007720 Solanum tuberosum HOM05D001799 ORTHO05D001655 5.3e-10 68.2 129 41.1
Glyma.13G127600 Glycine max HOM05D001799 ORTHO05D001655 6.9e-10 67.8 115 40.0
Lsat_1_v5_gn_8_91040 Lactuca sativa HOM05D001799 ORTHO05D001655 6.9e-10 67.8 141 36.9
Solyc09g064420.4 Solanum lycopersicum HOM05D001799 ORTHO05D001655 9.1e-10 67.4 135 39.3
arahy.Tifrunner.gnm1.ann1.TYPP4C Arachis hypogaea HOM05D001799 ORTHO05D001655 1.2e-09 67.0 125 37.6
Medtr1g069440 Medicago truncatula HOM05D001799 ORTHO05D001655 1.2e-09 67.0 117 38.5
MSTRG.18361 Avicennia marina HOM05D001799 ORTHO05D001655 4.5e-09 65.1 139 36.7
A09p12810 Brassica napus HOM05D001799 ORTHO05D001655 5.9e-09 64.7 117 40.2
C09p15170 Brassica napus HOM05D001799 ORTHO05D001655 5.9e-09 64.7 114 39.5
BcaNung04796 Brassica carinata HOM05D001799 ORTHO05D001655 1.0e-08 63.9 114 37.7
Lalb_Chr02g0152781 Lupinus albus HOM05D001799 ORTHO05D001655 1.0e-08 63.9 114 39.5
Lalb_Chr20g0113481 Lupinus albus HOM05D001799 ORTHO05D001655 1.3e-08 63.5 129 36.4
CAN.G119.8 Capsicum annuum HOM05D001799 ORTHO05D001655 1.7e-08 63.2 79 51.9
SGA_v2.0_scaffold1G00676 Striga asiatica HOM05D001799 ORTHO05D001655 1.7e-08 63.2 141 37.6
CARHR110800 Cardamine hirsuta HOM05D001799 ORTHO05D001655 2.2e-08 62.8 122 31.1
Psat6g064480 Pisum sativum HOM05D001799 ORTHO05D001655 2.9e-08 62.4 115 36.5
DCAR_018528 Daucus carota HOM05D031924 ORTHO05D001655 5.0e-08 61.6 136 38.2
FAN24G0550 Fragaria x ananassa HOM05D001799 ORTHO05D001655 5.0e-08 61.6 115 40.9
Psat3g052240 Pisum sativum HOM05D001799 ORTHO05D001655 6.5e-08 61.2 127 37.8
BolC9t54423H Brassica oleracea HOM05D001799 ORTHO05D001655 8.5e-08 60.8 114 37.7
HanXRQChr04g0107651 Helianthus annuus HOM05D001799 ORTHO05D001655 1.9e-07 59.7 105 46.7
Nitab4.5_0000385g0050 Nicotiana tabacum HOM05D001799 ORTHO05D001655 1.9e-07 59.7 125 40.0
arahy.Tifrunner.gnm1.ann1.FR0W00 Arachis hypogaea HOM05D001799 ORTHO05D001655 2.5e-07 59.3 127 35.4
EL10Ac7g17710 Beta vulgaris HOM05D001799 ORTHO05D001655 2.5e-07 59.3 144 35.4
Eucgr.K01404 Eucalyptus grandis HOM05D001799 ORTHO05D001655 2.5e-07 59.3 124 40.3
FvH4_2g20270 Fragaria vesca HOM05D001799 ORTHO05D001655 2.5e-07 59.3 120 38.3
Rhsim01G0259600 Rhododendron simsii HOM05D001799 ORTHO05D001655 3.2e-07 58.9 117 37.6
AT2G20310 Arabidopsis thaliana HOM05D001799 ORTHO05D001655 4.2e-07 58.5 114 34.2
CSS0002635 Camellia sinensis var. sinensis HOM05D001799 ORTHO05D001655 5.5e-07 58.2 119 39.5
Sc17g0002870 Simmondsia chinensis HOM05D001799 ORTHO05D001655 1.2e-06 57.0 128 33.6
Eucgr.K01406 Eucalyptus grandis HOM05D001799 ORTHO05D001655 1.6e-06 56.6 120 40.0
FAN15G1895 Fragaria x ananassa HOM05D001799 ORTHO05D001655 1.6e-06 56.6 113 38.1
BcaC06g36714 Brassica carinata HOM05D001799 ORTHO05D001655 2.1e-06 56.2 115 33.0
BolC7t40521H Brassica oleracea HOM05D001799 ORTHO05D001655 2.1e-06 56.2 115 33.0
Glyma.03G168500 Glycine max HOM05D001799 ORTHO05D001655 2.1e-06 56.2 125 34.4
Ca_08756_v3 Cicer arietinum L. HOM05D001799 ORTHO05D001655 3.6e-06 55.5 123 33.3
Glyma.19G169900 Glycine max HOM05D001799 ORTHO05D001655 3.6e-06 55.5 125 34.4
Phvul.007G153900 Phaseolus vulgaris HOM05D001799 ORTHO05D001655 4.7e-06 55.1 112 36.6


User provided reference genes

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