Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 1.8e-133 479.9 386 100.0
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 2.1e-41 174.1 307 42.7
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 4.4e-39 166.4 304 42.1
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 1.0e-35 155.2 296 43.2
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 1.0e-35 155.2 301 43.9
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 6.5e-35 152.5 299 45.2
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 1.4e-34 151.4 296 43.6
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 1.2e-33 148.3 304 41.4
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 4.7e-33 146.4 298 39.3
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 5.7e-31 139.4 299 39.5
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 1.7e-30 137.9 297 39.7
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 2.4e-29 134.0 313 40.6
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 4.1e-29 133.3 299 39.8
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 1.6e-28 131.3 301 39.9
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 2.6e-28 130.6 303 47.2
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 2.6e-28 130.6 305 40.0
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 4.5e-28 129.8 297 47.5
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 4.5e-28 129.8 301 41.2
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 7.7e-28 129.0 311 43.4
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 7.7e-28 129.0 302 39.4
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 2.9e-27 127.1 308 41.6
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 3.8e-27 126.7 297 38.4
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 8.5e-27 125.6 303 38.3
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 1.9e-26 124.4 316 42.4
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 2.5e-26 124.0 294 37.1
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 3.2e-26 123.6 297 38.0
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 3.2e-26 123.6 297 38.0
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 4.2e-26 123.2 303 38.6
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 4.2e-26 123.2 297 35.4
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 5.5e-26 122.9 312 32.7
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 5.5e-26 122.9 301 39.2
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 7.2e-26 122.5 309 37.9
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 7.2e-26 122.5 301 35.2
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 1.6e-25 121.3 305 39.3
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 2.1e-25 120.9 297 32.3
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 2.7e-25 120.6 317 43.2
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 6.1e-25 119.4 234 36.8
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 6.1e-25 119.4 234 36.8
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 6.1e-25 119.4 298 35.6
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 1.0e-24 118.6 302 35.8
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 1.0e-24 118.6 301 34.2
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 4.0e-24 116.7 310 37.4
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 6.7e-24 115.9 303 36.0
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 6.7e-24 115.9 307 39.7
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 1.2e-23 115.2 297 34.0
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 1.2e-23 115.2 308 40.9
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 1.2e-23 115.2 297 39.4
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 1.5e-23 114.8 294 33.7
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 3.3e-23 113.6 298 34.9
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 3.3e-23 113.6 304 34.2
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 2.2e-22 110.9 295 32.2
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 3.1e-21 107.1 324 34.9
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 7.0e-21 105.9 302 34.8
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 2.0e-20 104.4 305 35.4
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 2.7e-20 104.0 310 31.3
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 3.5e-20 103.6 306 32.7
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 5.9e-20 102.8 306 32.4
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 7.7e-20 102.4 319 38.9
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 1.0e-19 102.1 308 33.1
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 1.3e-19 101.7 308 35.4
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 2.2e-19 100.9 309 34.6
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 5.0e-19 99.8 304 36.2
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 6.5e-19 99.4 300 38.3
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 8.5e-19 99.0 311 32.8
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 1.1e-18 98.6 306 35.0
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 7.2e-18 95.9 319 30.4
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 1.4e-16 91.7 294 31.0
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 2.3e-16 90.9 300 31.3
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 2.6e-15 87.4 326 32.5
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 4.4e-15 86.7 310 32.6
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 1.1e-13 82.0 303 31.7
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 1.8e-13 81.3 298 30.5
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 1.8e-13 81.3 236 38.1
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 1.8e-13 81.3 266 29.7
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 4.1e-13 80.1 305 31.1
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 7.0e-13 79.3 318 30.2
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 2.7e-12 77.4 255 31.0
CANSAT01G1705 Cannabis sativa HOM05D007706 ORTHO05D009593 3.5e-12 77.0 296 35.1
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 3.5e-12 77.0 345 31.6
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 7.7e-12 75.9 314 30.6
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 1.3e-11 75.1 299 35.8
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 2.9e-11 73.9 305 29.5
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 3.8e-11 73.6 309 30.1
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 3.8e-11 73.6 308 28.2
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 5.0e-11 73.2 307 31.9
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.5e-10 71.6 307 31.9
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 4.2e-10 70.1 302 29.8
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 2.1e-09 67.8 116 38.8
CANSAT78G1020 Cannabis sativa HOM05D006910 ORTHO05D008937 2.8e-09 67.4 237 33.3
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 2.8e-09 67.4 299 28.1
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 2.8e-09 67.4 231 31.2
Ciclev10004771m.g Citrus clementina HOM05D006910 ORTHO05D008937 3.6e-09 67.0 304 29.9
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 4.7e-09 66.6 301 27.9
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.0e-08 65.5 33 84.8
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 1.0e-08 65.5 308 28.6
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 1.4e-08 65.1 303 27.7
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 3.0e-08 63.9 212 31.1
QL06p021124 Quercus lobata HOM05D006910 ORTHO05D008937 8.9e-08 62.4 117 35.9
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 1.2e-07 62.0 182 27.5
Lalb_Chr01g0019491 Lupinus albus HOM05D007706 ORTHO05D009593 1.5e-07 61.6 107 49.5
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 2.6e-07 60.8 167 34.1
Rhsim02G0044100 Rhododendron simsii HOM05D006910 ORTHO05D008937 4.4e-07 60.1 318 32.7
CDE11G0528 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 5.7e-07 59.7 299 28.4
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 7.5e-07 59.3 321 26.5
Hma1.2p1_0112F.1_g054780 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 9.8e-07 58.9 33 75.8
Thecc.04G265400 Theobroma cacao HOM05D006910 ORTHO05D008937 9.8e-07 58.9 33 81.8
ATR0787G077 Amborella trichopoda HOM05D007706 ORTHO05D009593 1.3e-06 58.5 297 27.3
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 1.3e-06 58.5 31 83.9
Actinidia39932 Actinidia chinensis HOM05D006910 ORTHO05D008937 1.7e-06 58.2 33 78.8
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 1.7e-06 58.2 33 75.8
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 2.8e-06 57.4 114 31.6
Nitab4.5_0006344g0050 Nicotiana tabacum HOM05D006910 ORTHO05D008937 2.8e-06 57.4 113 38.1
Lj6C621T3 Lonicera japonica HOM05D006910 ORTHO05D008937 3.7e-06 57.0 108 37.0
CAN.G524.13 Capsicum annuum HOM05D006910 ORTHO05D008937 4.9e-06 56.6 104 36.5
Oeu011215.1 Olea europaea HOM05D006910 ORTHO05D008937 4.9e-06 56.6 33 81.8
Sabra10G0041700 Salix brachista HOM05D006910 ORTHO05D008937 4.9e-06 56.6 33 72.7
DCAR_027350 Daucus carota HOM05D006910 ORTHO05D008937 6.3e-06 56.2 33 72.7


User provided reference genes

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