Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 2.4e-295 1018.1 511 100.0
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 2.4e-202 709.1 511 72.8
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 4.1e-202 708.4 511 73.0
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 5.0e-200 701.4 520 69.4
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 1.9e-199 699.5 511 71.2
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 9.4e-199 697.2 511 72.2
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 9.4e-199 697.2 516 69.4
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 1.6e-198 696.4 519 71.3
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 2.7e-198 695.7 520 69.0
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 6.1e-198 694.5 511 72.0
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 6.1e-198 694.5 511 72.0
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 1.4e-197 693.3 520 71.2
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.1e-196 690.3 516 69.2
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 3.7e-195 685.3 516 69.6
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.1e-194 683.7 515 69.7
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 1.8e-194 682.9 518 68.5
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 2.4e-194 682.6 515 68.5
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 6.5e-192 674.5 518 67.4
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 6.5e-192 674.5 516 66.5
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 8.5e-192 674.1 512 68.8
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 3.2e-191 672.2 516 69.6
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 4.2e-191 671.8 518 67.0
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 3.6e-190 668.7 516 67.2
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 1.0e-189 667.2 515 68.2
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 1.8e-189 666.4 518 66.8
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 2.6e-188 662.5 518 66.2
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 3.3e-188 662.1 517 67.5
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 7.5e-188 661.0 518 66.4
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 7.5e-188 661.0 520 67.1
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 3.7e-187 658.7 518 66.6
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 3.7e-187 658.7 515 66.2
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 6.3e-187 657.9 521 66.8
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 1.0e-184 650.6 520 66.0
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 1.0e-184 650.6 519 66.7
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 5.0e-184 648.3 520 66.0
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 5.0e-184 648.3 520 66.0
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.0e-184 648.3 518 66.2
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 8.5e-184 647.5 521 66.0
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 1.1e-183 647.1 511 66.1
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 3.2e-183 645.6 508 66.9
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.7e-182 642.5 518 65.6
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.8e-181 639.8 518 65.3
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 6.8e-181 637.9 521 65.5
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 8.8e-181 637.5 516 64.3
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 1.2e-180 637.1 528 64.6
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 1.5e-180 636.7 517 66.0
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 1.1e-178 630.6 517 66.2
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 4.5e-177 625.2 526 64.8
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 3.8e-176 622.1 499 65.1
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 5.5e-175 618.2 522 63.0
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 3.6e-174 615.5 515 63.5
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 1.2e-172 610.5 513 62.8
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 9.8e-172 607.4 517 63.1
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 1.7e-171 606.7 529 63.5
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 2.4e-170 602.8 520 62.3
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 3.1e-170 602.4 516 62.2
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 7.0e-170 601.3 516 62.2
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 1.2e-169 600.5 520 62.9
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 2.0e-169 599.7 516 62.4
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 2.3e-168 596.3 525 60.8
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 2.3e-168 596.3 513 61.4
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 6.6e-168 594.7 514 60.9
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 8.6e-168 594.3 525 60.8
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 8.6e-168 594.3 522 61.3
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 1.9e-167 593.2 510 61.6
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 4.3e-167 592.0 518 61.4
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 7.3e-167 591.3 519 64.4
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 9.5e-167 590.9 521 60.7
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 1.8e-165 586.6 515 62.1
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 3.0e-165 585.9 512 60.7
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 5.2e-165 585.1 529 60.9
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 6.8e-165 584.7 514 60.9
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 1.2e-164 583.9 516 61.0
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 7.5e-164 581.3 523 59.8
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 2.9e-163 579.3 511 63.2
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 8.3e-163 577.8 555 59.6
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 1.1e-162 577.4 514 62.1
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 1.8e-162 576.6 516 60.7
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 2.4e-162 576.2 513 61.6
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 3.2e-162 575.9 515 62.5
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 3.2e-162 575.9 514 62.1
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 5.9e-161 571.6 515 59.8
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 3.9e-160 568.9 537 60.0
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 8.6e-160 567.8 521 62.4
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 2.1e-158 563.1 514 59.7
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 6.2e-158 561.6 513 60.4
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 6.2e-158 561.6 517 58.6
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 1.8e-157 560.1 518 59.5
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 3.1e-157 559.3 518 58.5
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 6.8e-157 558.1 514 58.4
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 1.2e-156 557.4 520 57.3
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 1.2e-156 557.4 520 58.8
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.5e-156 557.0 518 59.8
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 2.6e-156 556.2 519 59.0
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 2.6e-156 556.2 514 59.9
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 4.4e-156 555.4 518 59.3
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 7.5e-156 554.7 510 59.8
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 7.5e-156 554.7 523 59.5
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 7.5e-156 554.7 518 58.5
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 4.1e-154 548.9 519 58.2
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 7.0e-154 548.1 518 58.3
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.0e-152 544.3 550 56.2
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 3.0e-152 542.7 512 58.2
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 3.9e-152 542.3 513 56.9
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.1e-151 540.8 515 58.3
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 1.9e-151 540.0 426 65.5
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 2.5e-151 539.7 460 64.1
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 4.3e-151 538.9 520 57.7
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 3.6e-150 535.8 518 58.5
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 3.6e-150 535.8 560 54.6
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 1.1e-149 534.3 525 56.6
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 7.1e-146 521.5 547 55.0
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 7.1e-146 521.5 513 57.1
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 2.1e-145 520.0 535 55.7
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 3.0e-144 516.2 497 57.5
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 8.6e-144 514.6 504 56.3
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 2.5e-143 513.1 494 57.5
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 7.3e-143 511.5 502 58.6
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 6.8e-141 505.0 500 56.4
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 4.4e-140 502.3 521 54.9
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 6.4e-139 498.4 442 62.0
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 1.9e-138 496.9 495 57.0
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 1.9e-138 496.9 497 54.9
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 9.6e-135 484.6 535 53.3
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 4.0e-133 479.2 513 53.2
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 2.2e-131 473.4 496 54.2
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.7e-128 463.8 494 53.8
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 2.5e-127 459.9 503 53.7
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 7.1e-122 441.8 488 52.5
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 3.5e-121 439.5 441 56.7
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 4.3e-119 432.6 384 62.2
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 1.8e-117 427.2 499 51.1
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 2.6e-116 423.3 524 46.2
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 4.6e-113 412.5 494 48.8
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 3.9e-112 409.5 352 61.6
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.1e-112 409.1 415 55.7
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.9e-111 407.1 525 45.1
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 3.3e-111 406.4 497 49.5
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 4.5e-108 396.0 513 48.1
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.9e-106 390.6 339 62.5
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 1.3e-104 384.4 369 58.3
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 5.3e-101 372.5 264 75.0
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 4.5e-100 369.4 494 45.5
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.7e-96 355.5 290 64.8
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.7e-89 333.6 435 46.0
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 9.1e-85 318.5 542 40.2
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 1.7e-78 297.7 522 40.2
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 6.5e-75 285.8 571 38.0
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 5.3e-69 266.2 255 58.0
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 5.0e-67 259.6 302 45.7
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 4.7e-65 253.1 572 34.8
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.4e-61 241.5 527 36.4
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 1.2e-49 201.8 472 32.8
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 1.2e-47 195.3 232 52.2
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 9.8e-47 192.2 439 34.4
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 1.9e-42 177.9 133 63.2
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 1.1e-40 172.2 251 40.2
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 4.9e-38 163.3 146 54.1
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 6.0e-36 156.4 228 44.7
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 1.2e-33 148.7 593 27.3
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 7.5e-31 139.4 188 45.2
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 6.4e-30 136.3 163 52.1
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 2.7e-20 104.4 92 58.7
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.7e-19 101.7 61 83.6
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 2.3e-19 101.3 58 81.0
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 6.9e-16 89.7 68 63.2
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 4.4e-15 87.0 90 56.7
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 2.9e-14 84.3 113 43.4
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.2e-13 80.5 90 52.2
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 9.3e-13 79.3 78 64.1
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 3.9e-11 73.9 40 87.5
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 1.9e-10 71.6 59 55.9
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 4.3e-10 70.5 90 46.7
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 4.8e-09 67.0 151 35.8
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 2.9e-06 57.8 46 56.5


User provided reference genes

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