Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 6.4e-230 800.4 414 100.0
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 1.2e-159 567.0 413 70.5
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 3.2e-157 558.9 413 70.0
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.5e-154 550.1 413 68.8
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 1.5e-154 550.1 411 70.3
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.0e-154 549.7 411 70.3
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 5.7e-154 548.1 413 68.5
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 5.7e-154 548.1 413 68.5
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.4e-152 543.5 403 69.7
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 7.0e-152 541.2 412 69.7
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.6e-151 540.0 412 69.2
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 3.5e-151 538.9 413 67.6
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 5.9e-151 538.1 399 68.2
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 7.7e-151 537.7 410 68.8
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 7.7e-151 537.7 410 67.6
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.0e-150 537.3 413 68.0
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 2.5e-149 532.7 412 68.2
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 3.2e-149 532.3 413 66.6
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 6.1e-148 528.1 414 66.4
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 6.1e-148 528.1 413 66.3
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 8.0e-148 527.7 403 68.0
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.4e-147 526.9 413 66.1
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.8e-147 526.6 407 66.6
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 2.3e-147 526.2 401 69.1
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 6.8e-147 524.6 401 68.1
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 6.8e-147 524.6 403 68.7
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.2e-146 523.9 404 67.1
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.5e-146 523.5 401 67.8
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.0e-146 523.1 402 68.7
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 5.7e-146 521.5 407 66.3
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 1.7e-145 520.0 401 67.6
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 2.2e-145 519.6 403 67.7
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 6.3e-145 518.1 403 68.0
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.1e-144 517.3 413 65.1
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-144 516.5 403 68.0
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.4e-144 516.2 418 66.5
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 7.0e-144 514.6 407 64.6
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.7e-143 512.7 401 67.8
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.7e-143 512.7 409 64.3
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 3.5e-143 512.3 404 66.6
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 4.5e-143 511.9 403 67.5
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.9e-143 511.5 403 67.5
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 7.7e-143 511.1 404 66.8
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 5.0e-142 508.4 404 66.1
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 6.5e-142 508.1 403 67.0
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.1e-141 507.3 399 66.7
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.9e-141 506.5 402 65.4
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 4.2e-141 505.4 409 65.0
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 5.5e-141 505.0 415 64.1
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 5.5e-141 505.0 407 63.4
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.2e-140 503.8 407 63.6
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.4e-139 500.4 403 67.0
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 3.0e-139 499.2 412 66.3
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.5e-138 496.9 401 65.6
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 5.7e-138 495.0 406 62.8
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 5.7e-138 495.0 443 59.6
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 1.3e-137 493.8 404 65.3
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 1.3e-137 493.8 411 63.3
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 2.4e-136 489.6 410 60.7
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 5.4e-136 488.4 411 61.3
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 7.0e-136 488.0 413 61.7
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.2e-135 487.3 410 63.9
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.6e-135 486.9 401 62.8
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.0e-135 486.5 411 61.6
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.7e-135 486.1 411 60.8
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 4.5e-135 485.3 411 61.8
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.0e-134 484.2 411 62.3
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 2.3e-134 483.0 414 61.4
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 2.9e-134 482.6 403 64.0
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 3.8e-134 482.3 413 60.8
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 3.3e-133 479.2 413 62.0
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 5.6e-133 478.4 405 63.7
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.0e-131 474.2 404 60.9
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 6.8e-131 471.5 403 63.5
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 3.4e-130 469.2 404 60.9
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.3e-129 467.2 399 64.2
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.3e-129 467.2 399 64.2
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.3e-129 467.2 413 59.8
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 2.2e-129 466.5 417 59.0
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 3.7e-129 465.7 399 63.9
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.1e-128 464.2 418 58.9
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 2.4e-128 463.0 399 62.9
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 2.4e-128 463.0 399 62.9
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 8.6e-126 454.5 410 59.5
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 2.6e-122 443.0 415 58.1
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.2e-116 424.1 401 58.1
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 8.9e-115 417.9 411 55.0
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.0e-114 416.8 400 57.2
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.3e-113 414.1 411 55.0
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 3.7e-113 412.5 371 60.1
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 4.9e-113 412.1 418 53.1
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 7.1e-112 408.3 417 54.0
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 3.9e-110 402.5 412 53.6
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 3.8e-105 386.0 412 52.9
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 4.6e-103 379.0 373 57.6
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.1e-101 374.4 477 47.4
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.5e-98 364.0 224 78.6
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.1e-95 353.6 237 76.4
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.3e-78 297.7 411 41.8
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.9e-72 277.3 243 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 4.2e-72 276.2 399 40.4
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 9.6e-69 265.0 259 55.6
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 2.8e-68 263.5 272 52.9
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 4.3e-61 239.6 440 34.1
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 3.7e-60 236.5 292 51.0
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.1e-59 235.0 296 41.2
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 4.4e-53 213.0 323 39.0
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 8.0e-39 165.6 301 34.6
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 4.0e-38 163.3 151 58.9
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 8.5e-33 145.6 224 45.1
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.0e-27 125.9 71 80.3
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.3e-25 121.7 154 42.9
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 6.1e-23 112.8 145 46.2
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 8.0e-15 85.9 92 53.3
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 3.0e-09 67.4 115 39.1
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 2.5e-08 64.3 73 46.6
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 7.3e-08 62.8 66 50.0


User provided reference genes

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