Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc85.7 Carica papaya HOM05D000300 ORTHO05D000383 2.5e-53 211.8 107 100.0
Haze_20085 Corylus avellana HOM05D000300 ORTHO05D000383 1.8e-14 82.8 95 48.4
CiPaw.10G022400 Carya illinoinensis HOM05D000300 ORTHO05D000383 1.5e-13 79.7 98 45.9
Cfa020105 Carpinus fangiana HOM05D000300 ORTHO05D000383 2.5e-13 79.0 95 45.3
TWI77G0117 Tripterygium wilfordii HOM05D000300 ORTHO05D000383 9.6e-13 77.0 95 44.2
QL07p025828 Quercus lobata HOM05D000300 ORTHO05D000383 6.2e-12 74.3 94 42.6
Atru.chr8.1239 Acer truncatum HOM05D000300 ORTHO05D000383 1.8e-11 72.8 76 46.1
Hma1.2p1_0881F.1_g232100 Hydrangea macrophylla HOM05D000300 ORTHO05D000383 1.8e-11 72.8 67 47.8
Atru.chr8.1235 Acer truncatum HOM05D000300 ORTHO05D000383 2.6e-10 68.9 79 45.6
Dinv11915 Davidia involucrata HOM05D000300 ORTHO05D000383 2.6e-10 68.9 101 41.6
Dinv40549 Davidia involucrata HOM05D000300 ORTHO05D000383 4.5e-10 68.2 67 44.8
Hma1.2p1_0304F.1_g119170 Hydrangea macrophylla HOM05D000300 ORTHO05D000383 2.2e-09 65.9 91 39.6
Sabra16G0065700 Salix brachista HOM05D000300 ORTHO05D000383 2.9e-09 65.5 76 43.4
Potri.016G063300 Populus trichocarpa HOM05D000300 ORTHO05D000383 3.8e-09 65.1 76 43.4
RcHm_v2.0_Chr3g0477891 Rosa chinensis HOM05D000300 ORTHO05D000383 3.8e-09 65.1 91 37.4
Actinidia05627 Actinidia chinensis HOM05D000300 ORTHO05D000383 4.9e-09 64.7 64 45.3
Ciclev10013712m.g Citrus clementina HOM05D000300 ORTHO05D000383 6.5e-09 64.3 76 42.1
Dinv07554 Davidia involucrata HOM05D000300 ORTHO05D000383 6.5e-09 64.3 64 48.4
Dinv26428 Davidia involucrata HOM05D000300 ORTHO05D000383 6.5e-09 64.3 76 39.5
Rhsim03G0056900 Rhododendron simsii HOM05D000300 ORTHO05D000383 8.4e-09 63.9 96 35.4
MD02G1294300 Malus domestica HOM05D000300 ORTHO05D000383 1.1e-08 63.5 75 40.0
Rhsim03G0057200 Rhododendron simsii HOM05D000300 ORTHO05D000383 1.1e-08 63.5 95 35.8
QL08p038541 Quercus lobata HOM05D000300 ORTHO05D000383 1.4e-08 63.2 97 34.0
Haze_13152 Corylus avellana HOM05D000300 ORTHO05D000383 1.9e-08 62.8 75 44.0
Actinidia03955 Actinidia chinensis HOM05D000300 ORTHO05D000383 2.5e-08 62.4 90 37.8
EL10Ac5g11777 Beta vulgaris HOM05D000300 ORTHO05D000383 2.5e-08 62.4 64 43.8
GSVIVG01020534001 Vitis vinifera HOM05D000300 ORTHO05D000383 2.5e-08 62.4 94 36.2
Atru.chr8.1241 Acer truncatum HOM05D000300 ORTHO05D000383 3.2e-08 62.0 101 38.6
Sed0023860 Sechium edule HOM05D000300 ORTHO05D000383 3.2e-08 62.0 106 35.8
MD12G1049300 Malus domestica HOM05D000300 ORTHO05D000383 4.2e-08 61.6 77 39.0
TAR626G0522 Trochodendron aralioides HOM05D000300 ORTHO05D000383 4.2e-08 61.6 76 42.1
CSS0038961 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 5.5e-08 61.2 70 40.0
QL08p038536 Quercus lobata HOM05D000300 ORTHO05D000383 7.1e-08 60.8 92 38.0
MELO3C018741.2 Cucumis melo HOM05D000300 ORTHO05D000383 9.3e-08 60.5 75 44.0
CSS0038865 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 1.2e-07 60.1 70 40.0
ClCG07G002970 Citrullus lanatus HOM05D000300 ORTHO05D000383 1.2e-07 60.1 67 43.3
Potri.011G051700 Populus trichocarpa HOM05D000300 ORTHO05D000383 1.2e-07 60.1 70 45.7
COL.COLO4_30180 Corchorus olitorius HOM05D000300 ORTHO05D000383 1.6e-07 59.7 84 34.5
Ciclev10011545m.g Citrus clementina HOM05D000300 ORTHO05D000383 2.7e-07 58.9 63 49.2
MBI18_g16992_MAGBIO Magnolia biondii HOM05D000300 ORTHO05D000383 2.7e-07 58.9 88 39.8
Sed0022098 Sechium edule HOM05D000300 ORTHO05D000383 2.7e-07 58.9 72 40.3
Nn1g06575 Nelumbo nucifera HOM05D000300 ORTHO05D000383 3.5e-07 58.5 77 36.4
Psat5g271360 Pisum sativum HOM05D000300 ORTHO05D000383 3.5e-07 58.5 84 35.7
PGR042G2580 Punica granatum HOM05D000300 ORTHO05D000383 3.5e-07 58.5 84 35.7
TAR627G0683 Trochodendron aralioides HOM05D000300 ORTHO05D000383 3.5e-07 58.5 76 40.8
CiPaw.10G047800 Carya illinoinensis HOM05D000300 ORTHO05D000383 4.6e-07 58.2 60 48.3
Eucgr.A02520 Eucalyptus grandis HOM05D000300 ORTHO05D000383 4.6e-07 58.2 85 40.0
RcHm_v2.0_Chr3g0477851 Rosa chinensis HOM05D000300 ORTHO05D000383 4.6e-07 58.2 90 36.7
COL.COLO4_29446 Corchorus olitorius HOM05D000300 ORTHO05D000383 7.9e-07 57.4 61 41.0
Haze_13151 Corylus avellana HOM05D000300 ORTHO05D000383 7.9e-07 57.4 86 37.2
Dinv23648 Davidia involucrata HOM05D000300 ORTHO05D000383 1.0e-06 57.0 87 39.1
Manes.09G041100 Manihot esculenta HOM05D000300 ORTHO05D000383 1.0e-06 57.0 65 43.1
CAN.G248.30 Capsicum annuum HOM05D000300 ORTHO05D000383 1.3e-06 56.6 82 34.1
Medtr2g090290 Medicago truncatula HOM05D000300 ORTHO05D000383 1.3e-06 56.6 73 38.4
THA.LOC104799713 Tarenaya hassleriana HOM05D000300 ORTHO05D000383 1.3e-06 56.6 69 40.6
Actinidia39312 Actinidia chinensis HOM05D000300 ORTHO05D000383 2.3e-06 55.8 61 37.7
vmacro07531 Vaccinium macrocarpon HOM05D000300 ORTHO05D000383 2.3e-06 55.8 77 37.7
CANSAT78G0733 Cannabis sativa HOM05D000300 ORTHO05D000383 3.0e-06 55.5 83 31.3
Dinv26429 Davidia involucrata HOM05D000300 ORTHO05D000383 3.0e-06 55.5 91 34.1
FvH4_6g21300 Fragaria vesca HOM05D000300 ORTHO05D000383 3.0e-06 55.5 93 34.4
FAN14G2203 Fragaria x ananassa HOM05D000300 ORTHO05D000383 3.0e-06 55.5 93 34.4
Nn1g04066 Nelumbo nucifera HOM05D000300 ORTHO05D000383 3.9e-06 55.1 77 36.4
arahy.Tifrunner.gnm1.ann1.N35TLR Arachis hypogaea HOM05D000300 ORTHO05D000383 5.1e-06 54.7 86 33.7
arahy.Tifrunner.gnm1.ann1.YT9B61 Arachis hypogaea HOM05D000300 ORTHO05D000383 5.1e-06 54.7 86 33.7
RcHm_v2.0_Chr6g0276181 Rosa chinensis HOM05D000300 ORTHO05D000383 5.1e-06 54.7 98 31.6
COL.COLO4_29459 Corchorus olitorius HOM05D000300 ORTHO05D000383 6.7e-06 54.3 61 42.6
ClCG07G002980 Citrullus lanatus HOM05D000300 ORTHO05D000383 8.7e-06 53.9 88 35.2
Duzib132G0424 Durio zibethinus HOM05D000300 ORTHO05D000383 8.7e-06 53.9 93 32.3
Lj1P1063T20 Lonicera japonica HOM05D000300 ORTHO05D000383 8.7e-06 53.9 61 42.6
MD09G1248800 Malus domestica HOM05D000300 ORTHO05D000383 8.7e-06 53.9 63 44.4
TPR.G6420 Trifolium pratense HOM05D000300 ORTHO05D000383 8.7e-06 53.9 86 32.6


User provided reference genes

Program Settings