Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc85.42 Carica papaya HOM05D004031 ORTHO05D006678 1.2e-117 426.4 206 100.0
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 1.1e-84 317.0 194 75.3
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 1.5e-83 313.2 194 76.3
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 4.5e-83 311.6 194 77.8
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 5.8e-83 311.2 194 77.3
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 5.8e-83 311.2 194 77.8
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 5.8e-83 311.2 194 77.8
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 7.6e-83 310.8 194 77.8
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 1.0e-82 310.5 194 76.3
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 1.3e-82 310.1 194 76.3
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 1.7e-82 309.7 194 74.2
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.7e-82 309.7 194 77.3
QL07p024684 Quercus lobata HOM05D004031 ORTHO05D006678 1.7e-82 309.7 194 77.3
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 1.7e-82 309.7 194 77.3
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 3.8e-82 308.5 194 75.8
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 8.4e-82 307.4 194 76.8
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 8.4e-82 307.4 194 76.8
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 1.9e-81 306.2 194 75.3
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 1.9e-81 306.2 194 75.3
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 9.3e-81 303.9 194 73.2
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 1.6e-80 303.1 194 73.7
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 1.6e-80 303.1 194 73.7
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 2.1e-80 302.8 194 73.7
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 3.5e-80 302.0 194 73.2
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 1.0e-79 300.4 194 70.6
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 1.0e-79 300.4 194 73.7
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 1.3e-79 300.1 194 72.2
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 1.8e-79 299.7 194 71.6
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 1.8e-79 299.7 194 75.8
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 3.0e-79 298.9 194 70.1
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 8.7e-79 297.4 194 75.8
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 1.1e-78 297.0 194 72.7
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 1.5e-78 296.6 194 72.7
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 1.5e-78 296.6 194 73.2
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 2.5e-78 295.8 194 70.6
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 2.5e-78 295.8 194 73.7
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 2.5e-78 295.8 194 70.6
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 3.3e-78 295.4 194 70.1
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 4.3e-78 295.0 194 71.1
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 4.3e-78 295.0 194 71.6
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 5.7e-78 294.7 194 71.1
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 9.7e-78 293.9 194 73.7
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 2.1e-77 292.7 194 70.1
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 2.8e-77 292.4 194 70.6
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 2.8e-77 292.4 194 70.6
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 3.7e-77 292.0 194 70.1
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 6.3e-77 291.2 194 69.6
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 8.2e-77 290.8 194 66.5
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 1.8e-76 289.7 194 67.5
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 2.4e-76 289.3 194 66.5
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 2.4e-76 289.3 194 69.1
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 2.4e-76 289.3 194 68.6
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 9.0e-76 287.3 194 70.1
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 2.6e-75 285.8 194 69.6
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 4.5e-75 285.0 194 70.1
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 5.9e-75 284.6 189 71.4
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 5.9e-75 284.6 186 71.5
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 7.6e-75 284.3 191 64.4
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 1.3e-74 283.5 194 67.0
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 2.2e-74 282.7 194 70.1
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 2.9e-74 282.3 193 69.9
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 3.8e-74 282.0 194 68.6
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 3.8e-74 282.0 194 68.0
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 3.8e-74 282.0 194 68.0
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 2.1e-72 276.2 194 68.6
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 3.6e-72 275.4 194 65.5
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 3.6e-72 275.4 208 62.5
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 4.6e-72 275.0 194 64.4
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 2.3e-71 272.7 195 64.1
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 5.1e-71 271.6 194 66.5
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 6.7e-71 271.2 194 63.9
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 8.7e-71 270.8 194 66.0
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 1.1e-70 270.4 194 63.4
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 1.5e-70 270.0 194 64.4
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 2.5e-70 269.2 194 66.5
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 2.8e-69 265.8 194 63.9
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 3.7e-69 265.4 194 65.5
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 4.8e-69 265.0 194 63.4
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 1.1e-68 263.8 187 66.3
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 1.8e-68 263.1 194 64.4
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 5.3e-68 261.5 189 66.7
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 6.9e-68 261.2 189 65.1
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 1.2e-67 260.4 194 67.0
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 1.5e-67 260.0 194 66.0
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 1.5e-67 260.0 194 66.0
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 2.0e-67 259.6 189 66.1
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 2.0e-67 259.6 182 66.5
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 3.4e-67 258.8 194 61.3
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 4.5e-67 258.5 195 65.6
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 4.5e-67 258.5 194 65.5
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 5.5e-65 251.5 189 65.6
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 7.9e-64 247.7 179 65.9
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 3.3e-62 242.3 182 56.0
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 1.7e-61 240.0 191 60.7
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 4.8e-61 238.4 187 55.6
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 1.4e-60 236.9 203 59.6
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 1.4e-60 236.9 203 59.6
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 1.4e-60 236.9 203 59.6
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 1.4e-60 236.9 194 62.4
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 2.9e-58 229.2 190 54.2
CSS0030127 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 2.1e-56 223.0 161 66.5
Psat7g023080 Pisum sativum HOM05D004031 ORTHO05D006678 2.1e-56 223.0 194 58.2
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 3.6e-56 222.2 190 52.1
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 7.7e-51 204.5 147 64.6
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 1.0e-50 204.1 183 52.5
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 2.2e-50 203.0 138 70.3
Peaxi162Scf00463g00519 Petunia axillaris HOM05D004031 ORTHO05D006678 1.0e-47 194.1 142 65.5
Solyc03g053000.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 2.3e-47 193.0 142 65.5
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 4.0e-47 192.2 168 58.3
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 5.7e-46 188.3 138 66.7
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 1.4e-44 183.7 130 65.4
SHI31745 Sapria himalayana HOM05D004031 ORTHO05D006678 1.8e-44 183.3 143 59.4
CBR_g44463 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-33 145.6 157 45.2
C05p55850 Brassica napus HOM05D004031 ORTHO05D006678 4.7e-24 115.5 90 60.0
BolC5t34254H Brassica oleracea HOM05D004031 ORTHO05D006678 4.7e-24 115.5 90 60.0
Peaxi162Scf00463g00518 Petunia axillaris HOM05D004031 ORTHO05D006678 1.5e-14 84.0 52 71.2
CSS0049250 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 1.3e-13 80.9 57 64.9
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 1.1e-12 77.8 50 72.0
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 2.4e-12 76.6 51 66.7
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 2.0e-11 73.6 54 61.1
Hund07844 Selenicereus undatus HOM05D004031 ORTHO05D006678 8.6e-10 68.2 62 58.1
Cre08.g370250 Chlamydomonas reinhardtii HOM05D004031 ORTHO05D006678 3.3e-09 66.2 149 28.2


User provided reference genes

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