Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 3.4e-131 472.2 349 100.0
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 9.5e-102 374.4 350 68.3
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 2.1e-101 373.2 348 75.3
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 1.4e-100 370.5 346 78.3
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 5.8e-99 365.2 349 70.5
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 5.8e-99 365.2 346 78.6
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 9.9e-99 364.4 346 68.2
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 4.9e-98 362.1 350 68.6
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 6.4e-98 361.7 346 78.0
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.1e-97 360.9 349 76.8
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 1.2e-96 357.5 349 76.5
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 2.7e-96 356.3 349 79.9
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 2.7e-96 356.3 347 77.5
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 6.0e-96 355.1 342 81.6
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.3e-95 354.0 349 75.9
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 2.3e-95 353.2 348 55.2
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.1e-94 350.9 349 75.1
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 3.3e-94 349.4 346 81.2
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 8.1e-93 344.7 352 67.6
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 6.8e-92 341.7 355 73.8
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 6.8e-92 341.7 345 79.7
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 2.6e-91 339.7 346 75.7
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 5.8e-91 338.6 346 68.2
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 9.9e-91 337.8 348 75.6
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 1.7e-90 337.0 332 78.0
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 2.2e-90 336.7 348 74.4
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 3.8e-90 335.9 348 76.7
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 6.4e-90 335.1 348 73.6
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 8.4e-90 334.7 348 74.1
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 1.4e-89 334.0 346 69.4
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 2.1e-88 330.1 350 74.9
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 2.1e-88 330.1 319 73.4
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 2.7e-88 329.7 346 67.6
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 3.3e-86 322.8 370 63.5
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 1.1e-84 317.8 347 71.5
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 2.4e-84 316.6 348 74.4
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 3.1e-84 316.2 356 70.8
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 5.8e-83 312.0 347 61.7
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 1.4e-81 307.4 341 69.8
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 2.1e-80 303.5 369 67.8
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 6.0e-80 302.0 346 64.2
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 7.8e-80 301.6 378 68.3
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 3.0e-79 299.7 331 51.7
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 1.8e-76 290.4 323 71.8
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 5.8e-75 285.4 353 67.1
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 9.9e-75 284.6 346 67.9
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 1.7e-74 283.9 346 59.8
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 2.9e-74 283.1 342 74.3
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 1.9e-73 280.4 349 60.7
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 3.2e-73 279.6 346 65.6
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 5.4e-73 278.9 346 67.9
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 7.1e-73 278.5 346 67.1
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 7.1e-73 278.5 346 67.9
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 7.1e-73 278.5 349 67.9
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 1.3e-71 274.2 346 66.8
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 2.3e-71 273.5 346 67.1
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 4.3e-70 269.2 346 57.2
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 7.4e-70 268.5 350 67.4
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 7.4e-70 268.5 347 62.0
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 9.6e-70 268.1 276 69.6
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 1.3e-69 267.7 380 44.2
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 1.3e-69 267.7 380 44.2
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 1.8e-68 263.8 347 68.6
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 2.4e-68 263.5 348 68.4
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 6.9e-68 261.9 340 68.2
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 2.0e-67 260.4 344 62.2
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 7.6e-67 258.5 328 61.0
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 1.3e-66 257.7 347 67.7
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 1.1e-65 254.6 328 47.3
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 1.9e-65 253.8 343 67.3
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 3.2e-65 253.1 351 65.8
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 7.1e-65 251.9 349 66.5
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 2.1e-64 250.4 358 42.2
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 1.8e-63 247.3 347 66.0
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 5.1e-63 245.7 340 46.8
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 1.1e-62 244.6 276 67.8
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 7.4e-62 241.9 351 65.2
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 7.4e-62 241.9 351 65.2
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 1.4e-60 237.7 346 62.7
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 3.1e-60 236.5 290 74.1
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 9.0e-60 235.0 319 64.9
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 1.2e-59 234.6 290 72.4
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 2.6e-59 233.4 350 48.3
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 4.9e-58 229.2 290 67.9
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 9.3e-57 224.9 283 70.3
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 4.1e-52 209.5 277 61.7
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 1.2e-51 208.0 344 58.1
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 7.6e-51 205.3 289 67.5
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 2.9e-50 203.4 296 65.9
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 2.5e-49 200.3 400 40.2
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.9e-46 190.7 410 37.1
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 1.2e-43 181.4 142 71.1
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 2.6e-43 180.3 276 65.9
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 2.6e-43 180.3 289 65.4
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 7.7e-43 178.7 256 77.3
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 1.0e-42 178.3 115 72.2
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 1.3e-42 177.9 339 52.2
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 2.9e-42 176.8 276 65.9
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 1.4e-41 174.5 297 64.3
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 6.1e-40 169.1 348 48.3
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 6.3e-37 159.1 137 59.1
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 7.7e-35 152.1 405 47.7
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 2.7e-32 143.7 289 62.3
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 4.7e-32 142.9 107 69.2
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 4.7e-32 142.9 107 69.2
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 2.3e-31 140.6 344 48.5
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 2.8e-29 133.7 121 57.9
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 3.5e-27 126.7 273 41.0
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 2.9e-26 123.6 343 34.7
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 3.6e-24 116.7 125 50.4
AUR62015309 Chenopodium quinoa HOM05D007176 ORTHO05D009050 2.6e-22 110.5 103 54.4
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 2.2e-18 97.4 299 26.4
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 3.6e-16 90.1 289 39.4
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 4.0e-07 60.1 96 40.6
Manes.03G187500 Manihot esculenta HOM05D002762 ORTHO05D004643 5.7e-06 56.2 76 40.8
Mapoly0010s0090 Marchantia polymorpha HOM05D002125 ORTHO05D002105 5.7e-06 56.2 99 33.3
Ciclev10004705m.g Citrus clementina HOM05D002762 ORTHO05D004643 7.5e-06 55.8 88 38.6
Nn4g26135 Nelumbo nucifera HOM05D002762 ORTHO05D004643 7.5e-06 55.8 112 34.8


User provided reference genes

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