Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.1e-212 743.0 360 100.0
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 6.8e-196 687.2 361 91.1
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.7e-194 682.6 361 90.9
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 1.4e-193 679.5 361 91.4
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 1.9e-193 679.1 359 90.3
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 7.1e-193 677.2 361 89.8
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 7.1e-193 677.2 361 90.9
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 2.7e-192 675.2 361 89.8
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 3.5e-192 674.9 361 90.0
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 7.8e-192 673.7 359 91.1
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.0e-191 673.3 361 89.8
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 2.3e-191 672.2 357 90.2
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 3.0e-191 671.8 359 89.1
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 3.9e-191 671.4 361 89.5
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 3.9e-191 671.4 361 89.5
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 1.9e-190 669.1 361 88.6
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 2.5e-190 668.7 358 89.4
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.5e-190 668.7 361 88.6
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 3.3e-190 668.3 361 89.8
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 5.6e-190 667.5 358 89.1
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 9.6e-190 666.8 361 89.2
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 9.6e-190 666.8 361 88.9
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 9.6e-190 666.8 359 89.1
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 8.1e-189 663.7 361 88.6
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.1e-188 663.3 361 87.8
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.8e-188 662.5 361 87.5
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.8e-188 662.5 361 87.5
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.8e-188 662.5 361 88.4
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 4.0e-188 661.4 361 88.1
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 5.3e-188 661.0 361 85.9
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 6.9e-188 660.6 361 87.0
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 6.9e-188 660.6 361 87.5
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.2e-187 659.8 361 87.3
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 1.5e-187 659.4 361 87.5
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 2.0e-187 659.1 361 87.8
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 9.9e-187 656.8 361 88.1
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 9.9e-187 656.8 358 88.0
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 1.3e-186 656.4 361 87.5
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 2.2e-186 655.6 361 85.6
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 4.9e-186 654.4 361 85.3
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 6.4e-186 654.1 361 86.1
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 1.1e-185 653.3 361 86.7
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 1.4e-185 652.9 387 82.4
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 2.4e-185 652.1 371 86.3
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 3.2e-185 651.7 361 85.9
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 4.2e-185 651.4 358 87.2
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.2e-184 649.8 360 87.5
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.6e-184 649.4 359 86.1
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 2.1e-184 649.0 396 80.3
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 2.7e-184 648.7 360 85.3
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 4.6e-184 647.9 361 86.4
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 7.8e-184 647.1 362 86.2
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 1.7e-183 646.0 357 86.8
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.7e-183 646.0 360 84.4
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 8.7e-183 643.7 339 90.0
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.1e-182 643.3 361 85.6
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 1.9e-182 642.5 360 86.1
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.9e-182 642.5 360 86.1
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.3e-182 641.3 360 85.8
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 9.6e-182 640.2 417 76.7
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.6e-181 639.4 360 85.6
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.6e-181 639.4 359 83.8
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 2.8e-181 638.6 361 84.5
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 3.6e-181 638.3 428 75.0
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 3.6e-181 638.3 360 85.6
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 1.1e-180 636.7 359 84.7
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 1.1e-180 636.7 360 85.3
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.4e-180 636.3 359 83.8
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 4.0e-180 634.8 359 83.3
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.5e-179 632.9 400 76.2
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 2.6e-179 632.1 359 83.8
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 2.6e-179 632.1 360 82.8
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 3.8e-178 628.2 359 82.7
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 3.8e-178 628.2 359 82.7
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 3.8e-178 628.2 359 82.7
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 4.9e-178 627.9 359 82.5
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.1e-177 626.7 359 82.2
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 2.4e-177 625.5 359 82.2
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 3.2e-177 625.2 361 82.0
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 1.2e-176 623.2 357 83.2
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 6.0e-176 620.9 357 82.6
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 1.1e-174 616.7 358 82.4
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.9e-174 615.9 360 83.1
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 4.3e-174 614.8 359 82.2
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 7.4e-174 614.0 387 76.7
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.6e-173 612.8 359 81.9
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 2.1e-173 612.5 359 81.9
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 6.2e-173 610.9 361 81.4
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 1.8e-172 609.4 361 81.2
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.8e-172 609.4 353 81.6
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 1.2e-168 596.7 313 92.0
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 1.8e-167 592.8 366 74.9
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 3.0e-167 592.0 357 78.2
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 3.0e-167 592.0 359 80.2
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 5.1e-167 591.3 366 76.0
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.6e-160 569.7 361 77.0
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.3e-159 566.6 302 90.1
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 3.3e-158 562.0 336 79.8
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 1.4e-153 546.6 306 86.9
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 1.6e-152 543.1 313 84.0
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 6.9e-148 527.7 357 71.1
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 4.5e-147 525.0 359 69.9
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 5.9e-147 524.6 403 67.2
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 3.9e-143 511.9 354 73.2
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 1.1e-142 510.4 358 68.7
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 1.5e-142 510.0 359 69.1
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 5.9e-131 471.5 253 90.1
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.7e-130 469.9 360 66.9
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.2e-130 469.5 364 65.7
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 7.2e-129 464.5 368 62.5
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 6.1e-128 461.5 241 93.4
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.5e-113 413.7 236 84.7
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 3.2e-108 396.0 211 88.6
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 2.9e-101 372.9 205 87.3
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 2.6e-78 296.6 180 81.7
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.9e-68 263.8 152 80.9
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 8.1e-64 248.4 154 77.9
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 3.1e-55 219.9 119 84.0
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 2.0e-54 217.2 126 81.7
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 3.1e-47 193.4 325 38.2
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 6.9e-47 192.2 207 53.1
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 4.8e-40 169.5 98 85.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 6.1e-35 152.5 117 69.2
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 2.8e-24 117.1 59 89.8
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 4.1e-23 113.2 111 57.7
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 3.2e-20 103.6 79 68.4
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 3.7e-16 90.1 162 38.9
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 9.1e-15 85.5 51 72.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 2.7e-14 84.0 37 94.6
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 5.7e-09 66.2 193 28.5


User provided reference genes

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