Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc82.32 Carica papaya HOM05D000528 ORTHO05D043533 1.8e-30 135.2 65 100.0
Carub.0005s0916 Capsella rubella HOM05D000528 ORTHO05D000999 1.8e-09 65.5 53 66.0
Gohir.D07G018100 Gossypium hirsutum HOM05D000528 ORTHO05D000999 1.8e-09 65.5 33 90.9
Gorai.001G018700 Gossypium raimondii HOM05D000528 ORTHO05D000999 1.8e-09 65.5 33 90.9
AL5G21370 Arabidopsis lyrata HOM05D000528 ORTHO05D000999 3.0e-09 64.7 53 66.0
Manes.03G054900 Manihot esculenta HOM05D000528 ORTHO05D000999 3.9e-09 64.3 33 87.9
THA.LOC104810976 Tarenaya hassleriana HOM05D000528 ORTHO05D000999 3.9e-09 64.3 34 85.3
Gohir.A07G018300 Gossypium hirsutum HOM05D000528 ORTHO05D000999 5.1e-09 63.9 33 87.9
Thecc.09G067600 Theobroma cacao HOM05D000528 ORTHO05D000999 5.1e-09 63.9 33 87.9
Thhalv10002369m.g Eutrema salsugineum HOM05D000528 ORTHO05D000999 6.7e-09 63.5 46 69.6
TWI63G0826 Tripterygium wilfordii HOM05D000528 ORTHO05D000999 6.7e-09 63.5 33 87.9
Sp5g17840 Schrenkiella parvula HOM05D000528 ORTHO05D000999 1.1e-08 62.8 53 62.3
CARHR153370 Cardamine hirsuta HOM05D000528 ORTHO05D000999 1.5e-08 62.4 53 64.2
Manes.16G088500 Manihot esculenta HOM05D000528 ORTHO05D000999 1.5e-08 62.4 33 84.8
TWI34G0978 Tripterygium wilfordii HOM05D000528 ORTHO05D000999 1.5e-08 62.4 33 84.8
Aa31LG4G12930 Aethionema arabicum HOM05D000528 ORTHO05D000999 1.9e-08 62.0 53 62.3
THA.LOC104799601 Tarenaya hassleriana HOM05D000528 ORTHO05D000999 1.9e-08 62.0 34 82.4
Potri.006G216900 Populus trichocarpa HOM05D000528 ORTHO05D000999 2.5e-08 61.6 33 81.8
Sabra06G0167300 Salix brachista HOM05D000528 ORTHO05D000999 2.5e-08 61.6 33 81.8
Duzib150G1295 Durio zibethinus HOM05D000528 ORTHO05D000999 3.3e-08 61.2 47 68.1
AT3G43300 Arabidopsis thaliana HOM05D000528 ORTHO05D000999 4.3e-08 60.8 34 82.4
Cfa021584 Carpinus fangiana HOM05D000528 ORTHO05D000999 7.4e-08 60.1 32 81.2
Haze_21237 Corylus avellana HOM05D000528 ORTHO05D000999 7.4e-08 60.1 32 81.2
Atru.chr7.1804 Acer truncatum HOM05D000528 ORTHO05D000999 9.7e-08 59.7 33 78.8
Ca_21350_v3 Cicer arietinum L. HOM05D000528 ORTHO05D000999 9.7e-08 59.7 32 81.2
COL.COLO4_21179 Corchorus olitorius HOM05D000528 ORTHO05D000999 9.7e-08 59.7 33 81.8
A06p26630 Brassica napus HOM05D000528 ORTHO05D000999 1.3e-07 59.3 34 79.4
C03p67850 Brassica napus HOM05D000528 ORTHO05D000999 1.3e-07 59.3 34 79.4
BolSC21t60253H Brassica oleracea HOM05D000528 ORTHO05D000999 1.3e-07 59.3 34 79.4
BraA06t25597Z Brassica rapa HOM05D000528 ORTHO05D000999 1.3e-07 59.3 34 79.4
Nn6g31501 Nelumbo nucifera HOM05D000528 ORTHO05D000999 1.3e-07 59.3 32 84.4
CiPaw.08G000100 Carya illinoinensis HOM05D000528 ORTHO05D000999 1.6e-07 58.9 32 81.2
Lalb_Chr12g0200411 Lupinus albus HOM05D000528 ORTHO05D000999 1.6e-07 58.9 32 81.2
CANSAT56G4237 Cannabis sativa HOM05D000528 ORTHO05D000999 2.8e-07 58.2 32 81.2
FAN26G3208 Fragaria x ananassa HOM05D000528 ORTHO05D000999 3.7e-07 57.8 32 81.2
Lalb_Chr07g0181491 Lupinus albus HOM05D000528 ORTHO05D000999 3.7e-07 57.8 32 81.2
Medtr4g124430 Medicago truncatula HOM05D000528 ORTHO05D000999 4.8e-07 57.4 32 78.1
Psat4g020000 Pisum sativum HOM05D000528 ORTHO05D000999 4.8e-07 57.4 32 78.1
arahy.Tifrunner.gnm1.ann1.JF9XSQ Arachis hypogaea HOM05D000528 ORTHO05D000999 6.3e-07 57.0 33 78.8
arahy.Tifrunner.gnm1.ann1.Z2MV1Y Arachis hypogaea HOM05D000528 ORTHO05D000999 6.3e-07 57.0 33 78.8
FvH4_1g09670 Fragaria vesca HOM05D000528 ORTHO05D000999 6.3e-07 57.0 32 81.2
Gohir.A05G037300 Gossypium hirsutum HOM05D000528 ORTHO05D000999 6.3e-07 57.0 33 78.8
Gorai.009G039300 Gossypium raimondii HOM05D000528 ORTHO05D000999 6.3e-07 57.0 33 78.8
Lj4g0008783 Lotus japonicus HOM05D000528 ORTHO05D000999 6.3e-07 57.0 32 78.1
RcHm_v2.0_Chr2g0096511 Rosa chinensis HOM05D000528 ORTHO05D000999 6.3e-07 57.0 38 68.4
TPR.G12643 Trifolium pratense HOM05D000528 ORTHO05D000999 6.3e-07 57.0 32 78.1
ClCG05G002580 Citrullus lanatus HOM05D000528 ORTHO05D000999 8.2e-07 56.6 34 82.4
MELO3C006224.2 Cucumis melo HOM05D000528 ORTHO05D000999 8.2e-07 56.6 34 82.4
CsaV3_3G010020 Cucumis sativus L. HOM05D000528 ORTHO05D000999 8.2e-07 56.6 34 82.4
HanXRQChr01g0017721 Helianthus annuus HOM05D000528 ORTHO05D000999 1.1e-06 56.2 33 78.8
VMungo1215G1674 Vigna mungo HOM05D000528 ORTHO05D000999 1.1e-06 56.2 32 78.1
Gohir.D05G038800 Gossypium hirsutum HOM05D000528 ORTHO05D000999 1.4e-06 55.8 33 75.8
MD15G1225500 Malus domestica HOM05D000528 ORTHO05D000999 1.4e-06 55.8 32 81.2
Prupe.7G189500 Prunus persica HOM05D000528 ORTHO05D000999 1.4e-06 55.8 32 81.2
PGR142G1496 Punica granatum HOM05D000528 ORTHO05D000999 1.4e-06 55.8 33 81.8
ECA234G2762 Erigeron canadensis HOM05D000528 ORTHO05D000999 1.8e-06 55.5 32 78.1
Lsat_1_v5_gn_1_84121 Lactuca sativa HOM05D000528 ORTHO05D000999 1.8e-06 55.5 32 78.1
Phvul.003G126000 Phaseolus vulgaris HOM05D000528 ORTHO05D000999 1.8e-06 55.5 32 75.0
SHI27961 Sapria himalayana HOM05D000528 ORTHO05D043533 1.8e-06 55.5 35 74.3
Sed0012879 Sechium edule HOM05D000528 ORTHO05D000999 1.8e-06 55.5 34 79.4
SGA_v2.0_scaffold13G06349 Striga asiatica HOM05D000528 ORTHO05D000999 1.8e-06 55.5 40 65.0
Sc03g0004600 Simmondsia chinensis HOM05D000528 ORTHO05D000999 2.4e-06 55.1 32 78.1
GSVIVG01014993001 Vitis vinifera HOM05D000528 ORTHO05D000999 2.4e-06 55.1 32 75.0
MBI13_g05971_MAGBIO Magnolia biondii HOM05D000528 ORTHO05D000999 3.1e-06 54.7 32 78.1
PSO017G2681 Papaver somniferum HOM05D000528 ORTHO05D000999 3.1e-06 54.7 32 78.1
PSO170G1988 Papaver somniferum HOM05D000528 ORTHO05D000999 3.1e-06 54.7 32 78.1
CSS0027335 Camellia sinensis var. sinensis HOM05D000528 ORTHO05D000999 4.1e-06 54.3 32 81.2
Oeu007685.1 Olea europaea HOM05D000528 ORTHO05D000999 4.1e-06 54.3 32 78.1
unitig_736.g22501 Utricularia gibba HOM05D000528 ORTHO05D000999 4.1e-06 54.3 33 75.8
ATR0006G069 Amborella trichopoda HOM05D000528 ORTHO05D000999 5.3e-06 53.9 38 65.8
TAR626G1794 Trochodendron aralioides HOM05D000528 ORTHO05D000999 6.9e-06 53.5 32 75.0
Aqoxy6G02695 Aquilegia oxysepala HOM05D000528 ORTHO05D000999 9.0e-06 53.1 32 78.1
Eucgr.C00756 Eucalyptus grandis HOM05D000528 ORTHO05D000999 9.0e-06 53.1 33 78.8


User provided reference genes

Program Settings