Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc82.29 Carica papaya HOM05D006517 ORTHO05D007886 7.9e-91 337.0 163 100.0
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 2.3e-13 79.7 65 55.4
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 8.6e-13 77.8 65 56.9
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 3.3e-12 75.9 70 51.4
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 5.6e-12 75.1 75 53.3
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 7.3e-12 74.7 64 54.7
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 9.5e-12 74.3 68 54.4
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 8.0e-11 71.2 67 50.7
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 8.0e-11 71.2 67 50.7
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 8.0e-11 71.2 67 50.7
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 1.1e-10 70.9 63 50.8
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 1.4e-10 70.5 67 47.8
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 2.3e-10 69.7 72 45.8
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 4.0e-10 68.9 70 50.0
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 5.2e-10 68.6 78 44.9
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 5.2e-10 68.6 67 49.3
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 6.8e-10 68.2 60 51.7
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 1.2e-09 67.4 73 49.3
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 2.0e-09 66.6 72 47.2
Cpa.g.sc23.98 Carica papaya HOM05D004541 ORTHO05D006163 2.6e-09 66.2 51 58.8
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 3.4e-09 65.9 65 44.6
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 4.4e-09 65.5 78 42.3
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 5.8e-09 65.1 75 45.3
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 1.3e-08 63.9 63 50.8
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 1.7e-08 63.5 72 44.4
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 1.7e-08 63.5 64 50.0
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 1.7e-08 63.5 76 46.1
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 2.2e-08 63.2 72 43.1
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 2.9e-08 62.8 60 51.7
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 2.9e-08 62.8 106 38.7
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 3.7e-08 62.4 65 47.7
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 6.4e-08 61.6 55 49.1
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 6.4e-08 61.6 72 48.6
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 1.1e-07 60.8 64 46.9
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 1.4e-07 60.5 58 53.4
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 1.4e-07 60.5 63 49.2
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 2.4e-07 59.7 105 35.2
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 2.4e-07 59.7 74 44.6
Cpa.g.sc2.104 Carica papaya HOM05D000003 ORTHO05D000004 3.2e-07 59.3 51 52.9
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 4.1e-07 58.9 69 44.9
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 5.4e-07 58.5 113 36.3
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 9.2e-07 57.8 67 43.3
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 2.1e-06 56.6 62 51.6
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 2.1e-06 56.6 70 45.7
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 2.7e-06 56.2 90 37.8
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 2.7e-06 56.2 57 49.1
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 2.7e-06 56.2 57 49.1
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 3.5e-06 55.8 63 44.4
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 4.6e-06 55.5 75 41.3
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 4.6e-06 55.5 79 35.4
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 6.0e-06 55.1 57 49.1
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 6.0e-06 55.1 60 45.0
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 6.0e-06 55.1 60 45.0


User provided reference genes

Program Settings