Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 2.3e-89 332.4 191 100.0
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.5e-11 73.9 200 36.5
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 5.5e-11 72.0 100 46.0
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 1.2e-10 70.9 93 47.3
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.2e-10 70.9 197 35.5
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 2.7e-10 69.7 75 53.3
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 4.7e-10 68.9 95 48.4
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 4.7e-10 68.9 101 49.5
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 1.4e-09 67.4 90 44.4
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 2.3e-09 66.6 100 48.0
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 3.0e-09 66.2 91 52.7
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 3.0e-09 66.2 91 52.7
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 3.0e-09 66.2 91 52.7
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 4.0e-09 65.9 100 46.0
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 5.2e-09 65.5 98 46.9
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.2e-09 65.5 95 49.5
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 5.2e-09 65.5 95 48.4
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.0e-08 63.5 96 42.7
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.0e-08 63.5 78 50.0
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 2.6e-08 63.2 180 37.8
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 2.6e-08 63.2 190 32.6
ClCG04G008210 Citrullus lanatus HOM05D023073 ORTHO05D005174 3.4e-08 62.8 84 39.3
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 5.7e-08 62.0 90 43.3
Sed0016652 Sechium edule HOM05D023073 ORTHO05D005174 5.7e-08 62.0 83 41.0
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 7.5e-08 61.6 81 46.9
Glyma.18G177800 Glycine max HOM05D005967 ORTHO05D005174 1.7e-07 60.5 83 47.0
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.2e-07 60.1 77 48.1
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.8e-07 59.7 89 42.7
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.8e-07 59.7 98 38.8
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 3.7e-07 59.3 106 44.3
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 3.7e-07 59.3 205 36.1
MELO3C003127.2 Cucumis melo HOM05D023073 ORTHO05D005174 6.3e-07 58.5 87 41.4
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 6.3e-07 58.5 89 47.2
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 6.3e-07 58.5 75 45.3
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 6.3e-07 58.5 97 46.4
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 8.3e-07 58.2 81 48.1
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 8.3e-07 58.2 99 47.5
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 1.4e-06 57.4 112 44.6
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 2.4e-06 56.6 71 39.4
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.4e-06 56.6 65 50.8
Sed0010435 Sechium edule HOM05D023073 ORTHO05D005174 2.4e-06 56.6 86 40.7
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 3.1e-06 56.2 174 31.0
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 3.1e-06 56.2 93 40.9
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 3.1e-06 56.2 155 35.5
FAN02G3432 Fragaria x ananassa HOM05D018126 ORTHO05D020711 4.1e-06 55.8 68 48.5
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.1e-06 55.8 190 33.7
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 4.1e-06 55.8 82 51.2
FAN05G2792 Fragaria x ananassa HOM05D018126 ORTHO05D020711 5.4e-06 55.5 68 48.5
FAN09G0198 Fragaria x ananassa HOM05D018126 ORTHO05D020711 5.4e-06 55.5 68 48.5
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 5.4e-06 55.5 170 31.2
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 5.4e-06 55.5 78 52.6
CsaV3_4G024960 Cucumis sativus L. HOM05D023073 ORTHO05D005174 7.0e-06 55.1 81 43.2
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 7.0e-06 55.1 84 48.8
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 7.0e-06 55.1 164 37.2
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.1e-06 54.7 89 43.8
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 9.1e-06 54.7 89 43.8
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 9.1e-06 54.7 66 43.9


User provided reference genes

Program Settings