Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc801.5 Carica papaya HOM05D006313 ORTHO05D007853 3.3e-73 278.1 123 100.0
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 1.4e-60 236.1 123 79.7
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 4.1e-60 234.6 123 76.4
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 4.1e-60 234.6 123 78.0
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 4.1e-60 234.6 123 78.0
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 4.1e-60 234.6 123 78.9
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 9.2e-60 233.4 123 78.9
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 9.2e-60 233.4 123 77.2
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 2.1e-59 232.3 123 77.2
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 2.7e-59 231.9 123 76.4
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 6.0e-59 230.7 123 76.4
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 6.0e-59 230.7 123 76.4
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 6.0e-59 230.7 123 77.2
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 1.0e-58 229.9 123 77.2
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 2.3e-58 228.8 123 74.8
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 3.0e-58 228.4 123 77.2
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 3.0e-58 228.4 123 77.2
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 3.0e-58 228.4 123 77.2
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 3.0e-58 228.4 123 77.2
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 3.0e-58 228.4 123 77.2
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 3.0e-58 228.4 121 76.9
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 5.1e-58 227.6 123 75.6
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 5.1e-58 227.6 123 75.6
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 6.6e-58 227.3 123 76.4
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 8.7e-58 226.9 123 74.8
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 1.1e-57 226.5 123 76.4
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 1.1e-57 226.5 123 74.8
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 1.9e-57 225.7 123 76.4
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 1.9e-57 225.7 123 74.0
ClCG11G018700 Citrullus lanatus HOM05D006313 ORTHO05D007853 2.5e-57 225.3 121 76.0
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 2.5e-57 225.3 121 74.4
TPR.G21513 Trifolium pratense HOM05D006313 ORTHO05D007853 3.3e-57 224.9 121 74.4
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 4.3e-57 224.6 123 76.4
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 4.3e-57 224.6 123 73.2
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 4.3e-57 224.6 123 75.6
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 7.3e-57 223.8 123 74.8
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 9.6e-57 223.4 121 73.6
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 1.2e-56 223.0 123 75.6
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 1.2e-56 223.0 123 73.2
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 1.2e-56 223.0 121 75.2
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 1.2e-56 223.0 121 73.6
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 1.6e-56 222.6 123 74.8
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 2.1e-56 222.2 122 72.1
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 2.8e-56 221.9 123 73.2
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 2.8e-56 221.9 123 71.5
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 3.6e-56 221.5 123 73.2
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 3.6e-56 221.5 123 74.8
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 3.6e-56 221.5 123 72.4
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 4.7e-56 221.1 122 74.6
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 4.7e-56 221.1 123 73.2
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 4.7e-56 221.1 123 73.2
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 6.2e-56 220.7 123 72.4
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 8.1e-56 220.3 121 73.6
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 8.1e-56 220.3 123 74.0
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 1.1e-55 219.9 123 73.2
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 1.4e-55 219.5 123 73.2
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 4.0e-55 218.0 123 72.4
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 5.2e-55 217.6 121 72.7
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 5.2e-55 217.6 121 72.7
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 5.2e-55 217.6 123 70.7
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 6.9e-55 217.2 123 71.5
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 1.2e-54 216.5 121 71.9
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 2.6e-54 215.3 123 71.5
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 3.4e-54 214.9 123 69.9
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 4.4e-54 214.5 123 72.4
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 4.4e-54 214.5 123 72.4
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 4.4e-54 214.5 122 71.3
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 7.6e-54 213.8 123 69.9
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 1.3e-53 213.0 123 72.4
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 1.7e-53 212.6 123 69.9
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 1.7e-53 212.6 123 69.1
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 2.9e-53 211.8 122 69.7
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 3.8e-53 211.5 123 69.9
Sabra05G0194300 Salix brachista HOM05D006313 ORTHO05D007853 4.9e-53 211.1 123 72.4
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 4.9e-53 211.1 123 72.4
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 6.4e-53 210.7 123 69.1
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 1.1e-52 209.9 123 70.7
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 2.4e-52 208.8 122 68.9
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 4.2e-52 208.0 123 66.7
Sc02g0009110 Simmondsia chinensis HOM05D006313 ORTHO05D007853 3.5e-51 204.9 123 69.1
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 4.6e-51 204.5 123 68.3
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 1.3e-50 203.0 123 69.1
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 9.6e-49 196.8 122 68.0
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 1.3e-48 196.4 122 64.8
Mapoly0001s0491 Marchantia polymorpha HOM05D006313 ORTHO05D007853 1.4e-47 193.0 121 62.0
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 4.0e-47 191.4 107 73.8
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 1.2e-46 189.9 122 64.8
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 1.2e-46 189.9 122 63.1
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 2.0e-46 189.1 123 62.6
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 3.2e-44 181.8 123 64.2
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 8.7e-42 173.7 122 58.2
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 1.5e-41 172.9 123 62.6
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 1.5e-41 172.9 123 56.9
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 2.8e-40 168.7 123 60.2
CBR_g6381 Chara braunii HOM05D006313 ORTHO05D007853 3.7e-40 168.3 122 54.1
SEGI_13417 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 1.8e-39 166.0 95 71.6
AUR62036859 Chenopodium quinoa HOM05D006313 ORTHO05D007853 1.7e-37 159.5 134 53.7
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 4.6e-35 151.4 91 64.8
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 3.1e-31 138.7 121 47.9
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 1.2e-30 136.7 74 71.6
CSS0049724 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 8.7e-26 120.6 69 71.0
COL.COLO4_05222 Corchorus olitorius HOM05D006313 ORTHO05D007853 2.6e-22 109.0 54 79.6
Psat2g064920 Pisum sativum HOM05D006313 ORTHO05D007853 6.3e-16 87.8 50 70.0
PRCOL_00004404 Prasinoderma coloniale HOM05D006313 ORTHO05D007853 5.3e-15 84.7 120 38.3
Cpa.g.sc26.189 Carica papaya HOM05D006313 ORTHO05D007853 3.3e-09 65.5 29 96.6
BcaC05g28338 Brassica carinata HOM05D004988 ORTHO05D018599 1.4e-07 60.1 50 56.0
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 2.6e-06 55.8 33 63.6


User provided reference genes

Program Settings