Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc80.33 Carica papaya HOM05D004630 ORTHO05D005727 6.6e-31 136.7 69 100.0
Sed0000779 Sechium edule HOM05D004630 ORTHO05D005727 1.2e-16 89.4 63 69.8
Dinv43828 Davidia involucrata HOM05D004630 ORTHO05D005727 3.5e-16 87.8 63 66.7
TAR636G2703 Trochodendron aralioides HOM05D004630 ORTHO05D005727 6.0e-16 87.0 63 69.8
RcHm_v2.0_Chr4g0428061 Rosa chinensis HOM05D004630 ORTHO05D005727 1.0e-15 86.3 62 66.1
CSS0009392 Camellia sinensis var. sinensis HOM05D004630 ORTHO05D005727 1.7e-15 85.5 63 66.7
CSS0039221 Camellia sinensis var. sinensis HOM05D004630 ORTHO05D005727 1.7e-15 85.5 63 66.7
ClCG03G006320 Citrullus lanatus HOM05D004630 ORTHO05D005727 2.3e-15 85.1 65 66.2
MD13G1136600 Malus domestica HOM05D004630 ORTHO05D005727 2.3e-15 85.1 62 66.1
Prupe.1G208800 Prunus persica HOM05D004630 ORTHO05D005727 2.3e-15 85.1 62 66.1
Manes.11G127500 Manihot esculenta HOM05D004630 ORTHO05D005727 3.0e-15 84.7 63 63.5
CARHR195960 Cardamine hirsuta HOM05D004630 ORTHO05D005727 3.9e-15 84.3 63 61.9
Duzib187G1410 Durio zibethinus HOM05D004630 ORTHO05D005727 3.9e-15 84.3 63 63.5
Haze_25597 Corylus avellana HOM05D004630 ORTHO05D005727 5.1e-15 84.0 63 63.5
CsaV3_1G037410 Cucumis sativus L. HOM05D004630 ORTHO05D005727 5.1e-15 84.0 63 68.3
Hma1.2p1_0482F.1_g162689 Hydrangea macrophylla HOM05D004630 ORTHO05D005727 5.1e-15 84.0 63 65.1
Sp6g26980 Schrenkiella parvula HOM05D004630 ORTHO05D005727 5.1e-15 84.0 63 63.5
Cfa003362 Carpinus fangiana HOM05D004630 ORTHO05D005727 6.6e-15 83.6 63 63.5
MD16G1131900 Malus domestica HOM05D004630 ORTHO05D005727 8.7e-15 83.2 62 64.5
Atru.chr1.2080 Acer truncatum HOM05D004630 ORTHO05D005727 1.1e-14 82.8 63 65.1
FvH4_4g21830 Fragaria vesca HOM05D004630 ORTHO05D005727 2.5e-14 81.6 62 62.9
Thhalv10012592m.g Eutrema salsugineum HOM05D004630 ORTHO05D005727 3.3e-14 81.3 63 61.9
CiPaw.04G170700 Carya illinoinensis HOM05D004630 ORTHO05D005727 4.3e-14 80.9 63 61.9
Potri.003G059300 Populus trichocarpa HOM05D004630 ORTHO05D005727 4.3e-14 80.9 63 65.1
QL02p088183 Quercus lobata HOM05D004630 ORTHO05D005727 4.3e-14 80.9 63 60.3
Sabra03G0033900 Salix brachista HOM05D004630 ORTHO05D005727 4.3e-14 80.9 63 65.1
Thecc.07G164200 Theobroma cacao HOM05D004630 ORTHO05D005727 4.3e-14 80.9 63 58.7
GSVIVG01034228001 Vitis vinifera HOM05D004630 ORTHO05D005727 4.3e-14 80.9 63 61.9
COL.COLO4_38353 Corchorus olitorius HOM05D004630 ORTHO05D005727 5.6e-14 80.5 63 60.3
MELO3C002801.2 Cucumis melo HOM05D004630 ORTHO05D005727 5.6e-14 80.5 63 68.3
Migut.N03011 Erythranthe guttata HOM05D004630 ORTHO05D005727 1.3e-13 79.3 63 61.9
Migut.O00493 Erythranthe guttata HOM05D004630 ORTHO05D005727 1.3e-13 79.3 63 61.9
Aqoxy7G01739 Aquilegia oxysepala HOM05D004630 ORTHO05D005727 1.6e-13 79.0 63 61.9
AL6G28300 Arabidopsis lyrata HOM05D004630 ORTHO05D005727 1.6e-13 79.0 63 57.1
AT5G17250 Arabidopsis thaliana HOM05D004630 ORTHO05D005727 1.6e-13 79.0 63 58.7
Ciclev10018715m.g Citrus clementina HOM05D004630 ORTHO05D005727 1.6e-13 79.0 63 63.5
HanXRQChr17g0554761 Helianthus annuus HOM05D004630 ORTHO05D005727 1.6e-13 79.0 63 63.5
BcaB08g36795 Brassica carinata HOM05D004630 ORTHO05D005727 2.8e-13 78.2 63 58.7
Nn7g38087 Nelumbo nucifera HOM05D004630 ORTHO05D005727 3.6e-13 77.8 63 60.3
SHI11357 Sapria himalayana HOM05D004630 ORTHO05D005727 4.8e-13 77.4 63 61.9
CANSAT11G0088 Cannabis sativa HOM05D004630 ORTHO05D005727 6.2e-13 77.0 62 66.1
Nitab4.5_0004432g0030 Nicotiana tabacum HOM05D004630 ORTHO05D005727 6.2e-13 77.0 63 63.5
Gohir.A01G096700 Gossypium hirsutum HOM05D004630 ORTHO05D005727 8.1e-13 76.6 63 57.1
Gohir.D01G081000 Gossypium hirsutum HOM05D004630 ORTHO05D005727 8.1e-13 76.6 63 57.1
Gorai.002G105900 Gossypium raimondii HOM05D004630 ORTHO05D005727 8.1e-13 76.6 63 57.1
Carub.0006s1544 Capsella rubella HOM05D004630 ORTHO05D005727 1.4e-12 75.9 63 57.1
Lalb_Chr12g0200461 Lupinus albus HOM05D004630 ORTHO05D005727 1.4e-12 75.9 65 61.5
MBI05_g35190_MAGBIO Magnolia biondii HOM05D004630 ORTHO05D005727 1.4e-12 75.9 63 63.5
Rhsim05G0234800 Rhododendron simsii HOM05D004630 ORTHO05D005727 1.4e-12 75.9 63 57.1
Lj9C588T4 Lonicera japonica HOM05D004630 ORTHO05D005727 1.8e-12 75.5 63 60.3
vmacro00088 Vaccinium macrocarpon HOM05D004630 ORTHO05D005727 2.4e-12 75.1 63 57.1
ECA233G6037 Erigeron canadensis HOM05D004630 ORTHO05D005727 3.1e-12 74.7 65 56.9
Eucgr.B01002 Eucalyptus grandis HOM05D004630 ORTHO05D005727 3.1e-12 74.7 63 61.9
PSO210G5682 Papaver somniferum HOM05D004630 ORTHO05D005727 3.1e-12 74.7 62 56.5
CAN.G689.26 Capsicum annuum HOM05D004630 ORTHO05D005727 4.0e-12 74.3 63 60.3
Glyma.13G116800 Glycine max HOM05D004630 ORTHO05D005727 4.0e-12 74.3 65 60.0
Oeu028192.1 Olea europaea HOM05D004630 ORTHO05D005727 4.0e-12 74.3 63 58.7
Phvul.003G124900 Phaseolus vulgaris HOM05D004630 ORTHO05D005727 4.0e-12 74.3 65 60.0
A10p22150 Brassica napus HOM05D004630 ORTHO05D005727 5.3e-12 73.9 62 59.7
Cc03_g11340 Coffea canephora HOM05D004630 ORTHO05D005727 5.3e-12 73.9 62 59.7
Peaxi162Scf00341g00622 Petunia axillaris HOM05D004630 ORTHO05D005727 5.3e-12 73.9 64 57.8
PGSC0003DMG400020700 Solanum tuberosum HOM05D004630 ORTHO05D005727 5.3e-12 73.9 63 60.3
BraA10t44274Z Brassica rapa HOM05D004630 ORTHO05D005727 6.9e-12 73.6 62 59.7
Medtr4g123557 Medicago truncatula HOM05D004630 ORTHO05D005727 6.9e-12 73.6 62 59.7
SalBow6G4274 Salvia bowleyana HOM05D004630 ORTHO05D005727 6.9e-12 73.6 63 58.7
Actinidia21906 Actinidia chinensis HOM05D004630 ORTHO05D005727 9.0e-12 73.2 63 60.3
MSTRG.13783 Avicennia marina HOM05D004630 ORTHO05D005727 9.0e-12 73.2 63 58.7
EL10Ac5g12859 Beta vulgaris HOM05D004630 ORTHO05D005727 9.0e-12 73.2 63 57.1
SalBow2G2706 Salvia bowleyana HOM05D004630 ORTHO05D005727 1.2e-11 72.8 63 60.3
SalBow7G2764 Salvia bowleyana HOM05D004630 ORTHO05D005727 1.2e-11 72.8 63 60.3
VMungo1215G1222 Vigna mungo HOM05D004630 ORTHO05D005727 1.2e-11 72.8 65 60.0
BcaC04g18817 Brassica carinata HOM05D004630 ORTHO05D005727 1.5e-11 72.4 62 58.1
C09p59940 Brassica napus HOM05D004630 ORTHO05D005727 1.5e-11 72.4 62 58.1
BolC9t58830H Brassica oleracea HOM05D004630 ORTHO05D005727 1.5e-11 72.4 62 58.1
DCAR_009035 Daucus carota HOM05D004630 ORTHO05D005727 1.5e-11 72.4 62 56.5
AUR62019782 Chenopodium quinoa HOM05D004630 ORTHO05D005727 2.0e-11 72.0 63 54.0
Psat4g020520 Pisum sativum HOM05D004630 ORTHO05D005727 2.0e-11 72.0 62 58.1
Rhsim10G0128800 Rhododendron simsii HOM05D004630 ORTHO05D005727 2.0e-11 72.0 62 54.8
Sopen07g005480 Solanum pennellii HOM05D004630 ORTHO05D005727 2.0e-11 72.0 63 58.7
unitig_578.g16518 Utricularia gibba HOM05D004630 ORTHO05D005727 2.0e-11 72.0 62 58.1
Solyc07g014610.4 Solanum lycopersicum HOM05D004630 ORTHO05D005727 2.6e-11 71.6 64 56.2
Ca_21358_v3 Cicer arietinum L. HOM05D004630 ORTHO05D005727 3.4e-11 71.2 62 58.1
SalBow5G1401 Salvia bowleyana HOM05D004630 ORTHO05D005727 3.4e-11 71.2 62 59.7
AUR62010786 Chenopodium quinoa HOM05D004630 ORTHO05D005727 4.5e-11 70.9 63 54.0
PGR031G0128 Punica granatum HOM05D004630 ORTHO05D005727 4.5e-11 70.9 63 52.4
Lj4g0015635 Lotus japonicus HOM05D004630 ORTHO05D005727 5.8e-11 70.5 62 56.5
Hund12270 Selenicereus undatus HOM05D004630 ORTHO05D005727 7.6e-11 70.1 69 50.7
Lj2g0001674 Lotus japonicus HOM05D004630 ORTHO05D005727 9.9e-11 69.7 62 56.5
Sc13g0008160 Simmondsia chinensis HOM05D004630 ORTHO05D005727 1.7e-10 68.9 62 53.2
Os10g0170300 Oryza sativa ssp. japonica HOM05D004630 ORTHO05D005727 2.9e-10 68.2 64 56.2
Ah.12g052160 Amaranthus hybridus HOM05D004630 ORTHO05D005727 3.8e-10 67.8 62 53.2
Zm00001eb127550 Zea mays HOM05D004630 ORTHO05D005727 3.8e-10 67.8 63 55.6
HPP92_010565 Vanilla planifolia HOM05D004630 ORTHO05D005727 4.9e-10 67.4 63 57.1
THA.LOC104820866 Tarenaya hassleriana HOM05D004630 ORTHO05D005727 6.4e-10 67.0 62 54.8
arahy.Tifrunner.gnm1.ann1.N7874Q Arachis hypogaea HOM05D004630 ORTHO05D005727 1.1e-09 66.2 71 54.9
arahy.Tifrunner.gnm1.ann1.W5Q7UV Arachis hypogaea HOM05D004630 ORTHO05D005727 1.1e-09 66.2 71 54.9
Nitab4.5_0000848g0070 Nicotiana tabacum HOM05D004630 ORTHO05D005727 1.1e-09 66.2 73 53.4
ATR0019G053 Amborella trichopoda HOM05D004630 ORTHO05D005727 1.4e-09 65.9 67 53.7
Hma1.2p1_1944F.1_g308560 Hydrangea macrophylla HOM05D004630 ORTHO05D005727 3.2e-09 64.7 51 62.7
Lsat_1_v5_gn_8_137620 Lactuca sativa HOM05D004630 ORTHO05D005727 3.2e-09 64.7 65 55.4
AagrBONN_evm.TU.Sc2ySwM_344.4351 Anthoceros agrestis HOM05D004630 ORTHO05D005727 1.2e-08 62.8 62 45.2
Aa31LG11G12420 Aethionema arabicum HOM05D004630 ORTHO05D005727 3.5e-08 61.2 77 45.5
Mapoly0027s0070 Marchantia polymorpha HOM05D004630 ORTHO05D005727 1.0e-07 59.7 66 47.0
Pp3c19_7340 Physcomitrium patens HOM05D004630 ORTHO05D005727 1.0e-07 59.7 62 50.0
TPR.G34395 Trifolium pratense HOM05D004630 ORTHO05D005727 1.9e-06 55.5 28 89.3


User provided reference genes

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