Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 1.2e-237 826.2 444 100.0
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 1.0e-76 291.6 469 42.6
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 2.2e-74 283.9 467 42.6
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 5.3e-73 279.3 439 45.3
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 1.2e-72 278.1 446 44.6
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 3.2e-70 270.0 435 43.0
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 2.7e-69 266.9 424 41.7
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 3.9e-68 263.1 412 41.7
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 5.1e-68 262.7 428 42.3
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 3.3e-67 260.0 440 42.3
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 7.4e-67 258.8 427 40.0
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 1.7e-66 257.7 428 40.7
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 2.8e-66 256.9 444 41.7
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 4.8e-66 256.1 431 42.7
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 8.2e-66 255.4 436 40.4
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 3.4e-64 250.0 436 42.4
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 7.7e-64 248.8 359 47.4
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 1.7e-63 247.7 446 40.1
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 1.9e-62 244.2 435 40.7
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.6e-61 241.1 424 40.8
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 2.7e-61 240.4 426 43.4
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 7.9e-61 238.8 455 41.1
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.0e-60 238.4 424 40.8
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 3.0e-60 236.9 426 42.3
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.7e-58 231.1 421 40.4
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.7e-58 229.9 425 40.5
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 4.8e-58 229.6 376 43.9
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 1.2e-56 224.9 433 39.0
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 8.0e-53 212.2 435 39.8
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 8.8e-52 208.8 433 37.4
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 7.4e-51 205.7 434 39.9
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 9.7e-51 205.3 429 36.8
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.1e-49 201.8 423 36.4
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 3.1e-49 200.3 449 34.1
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 1.6e-48 198.0 428 37.6
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 3.5e-48 196.8 395 37.5
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.6e-45 188.0 430 35.6
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 2.8e-42 177.2 429 36.4
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 2.5e-38 164.1 239 44.4
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.2e-37 161.8 418 32.1
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 8.0e-37 159.1 421 35.2
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 7.5e-35 152.5 368 37.5
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 1.3e-34 151.8 449 35.6
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 6.3e-34 149.4 304 38.8
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 8.3e-34 149.1 439 31.9
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 1.4e-33 148.3 236 41.1
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.4e-33 148.3 449 31.8
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 5.4e-33 146.4 461 29.7
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 1.7e-31 141.4 426 31.9
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.5e-30 138.3 467 27.8
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 4.2e-30 136.7 406 31.0
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 9.5e-30 135.6 478 29.3
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 3.6e-29 133.7 412 32.0
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 8.0e-29 132.5 474 30.8
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 2.3e-28 131.0 470 26.8
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 6.8e-28 129.4 246 39.0
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 1.2e-27 128.6 451 30.2
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 1.5e-27 128.3 483 29.2
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 4.4e-27 126.7 238 39.5
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 7.0e-25 119.4 293 36.2
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 1.6e-24 118.2 402 29.9
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 3.9e-23 113.6 247 36.4
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 5.0e-23 113.2 473 28.8
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 6.6e-23 112.8 315 32.1
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 6.6e-23 112.8 315 32.1
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 1.5e-22 111.7 458 27.5
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 2.5e-22 110.9 340 30.9
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 3.3e-22 110.5 278 32.7
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 7.3e-22 109.4 301 35.2
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 7.3e-22 109.4 436 28.2
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 1.8e-20 104.8 460 27.4
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 8.3e-18 95.9 507 27.4
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 7.8e-16 89.4 249 29.3
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 7.8e-16 89.4 453 25.4
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 1.0e-15 89.0 385 31.9
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 1.8e-12 78.2 422 26.3
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 5.2e-12 76.6 250 30.0
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 6.8e-12 76.3 100 44.0
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 7.1e-09 66.2 86 44.2
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 6.0e-08 63.2 57 49.1


User provided reference genes

Program Settings