Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 3.0e-78 295.0 141 100.0
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 3.4e-34 148.7 107 67.3
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 3.6e-31 138.7 106 66.0
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 6.1e-31 137.9 108 66.7
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 1.3e-30 136.7 110 60.9
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 1.1e-29 133.7 108 62.0
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.1e-29 133.7 110 64.5
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.9e-29 132.9 100 67.0
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.9e-29 132.9 108 62.0
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 7.4e-29 131.0 107 61.7
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 7.4e-29 131.0 107 61.7
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 7.4e-29 131.0 100 67.0
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 9.7e-29 130.6 100 66.0
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 9.7e-29 130.6 108 61.1
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 2.8e-28 129.0 141 51.1
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 3.7e-28 128.6 103 64.1
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 4.8e-28 128.3 141 50.4
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 8.2e-28 127.5 74 79.7
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 8.2e-28 127.5 107 60.7
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.1e-27 127.1 113 57.5
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 1.8e-27 126.3 72 81.9
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 2.4e-27 125.9 89 65.2
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 3.1e-27 125.6 71 80.3
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 3.1e-27 125.6 108 60.2
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 6.9e-27 124.4 88 69.3
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 6.9e-27 124.4 87 69.0
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.2e-26 123.6 110 58.2
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.5e-26 123.2 100 61.0
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 2.0e-26 122.9 101 59.4
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 2.0e-26 122.9 105 60.0
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 2.0e-26 122.9 99 61.6
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.0e-26 122.9 102 57.8
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 2.6e-26 122.5 94 62.8
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 3.4e-26 122.1 98 59.2
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 3.4e-26 122.1 98 59.2
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 3.4e-26 122.1 102 58.8
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 4.5e-26 121.7 98 59.2
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 4.5e-26 121.7 106 60.4
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 4.5e-26 121.7 115 53.0
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 4.5e-26 121.7 99 60.6
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 5.9e-26 121.3 100 57.0
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.7e-25 119.8 106 59.4
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 1.7e-25 119.8 54 94.4
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 1.7e-25 119.8 98 60.2
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 1.7e-25 119.8 110 55.5
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.7e-25 119.8 75 72.0
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 2.2e-25 119.4 107 56.1
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 2.2e-25 119.4 108 56.5
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 2.9e-25 119.0 102 59.8
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 2.9e-25 119.0 109 56.9
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 2.9e-25 119.0 102 60.8
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 3.8e-25 118.6 103 55.3
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 6.5e-25 117.9 98 59.2
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 8.5e-25 117.5 100 61.0
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.1e-24 117.1 98 57.1
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 1.1e-24 117.1 97 56.7
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 1.4e-24 116.7 62 83.9
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 1.9e-24 116.3 70 74.3
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 1.9e-24 116.3 58 84.5
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 1.9e-24 116.3 60 85.0
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 2.5e-24 115.9 115 52.2
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 3.2e-24 115.5 53 92.5
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 3.2e-24 115.5 109 54.1
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 3.2e-24 115.5 53 90.6
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 3.2e-24 115.5 53 92.5
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 3.2e-24 115.5 99 57.6
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 5.5e-24 114.8 57 84.2
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 7.2e-24 114.4 77 68.8
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 1.2e-23 113.6 52 92.3
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 1.2e-23 113.6 130 46.9
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 1.6e-23 113.2 55 87.3
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 2.1e-23 112.8 98 57.1
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 3.6e-23 112.1 97 55.7
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 3.6e-23 112.1 59 78.0
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 3.6e-23 112.1 73 69.9
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 4.6e-23 111.7 65 72.3
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 7.9e-23 110.9 51 92.2
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 7.9e-23 110.9 51 92.2
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 7.9e-23 110.9 51 92.2
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 7.9e-23 110.9 51 92.2
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 7.9e-23 110.9 51 92.2
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 7.9e-23 110.9 58 79.3
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 7.9e-23 110.9 51 92.2
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 1.0e-22 110.5 53 86.8
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 1.8e-22 109.8 98 57.1
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 1.8e-22 109.8 53 86.8
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 1.8e-22 109.8 52 88.5
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 2.3e-22 109.4 50 92.0
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 2.3e-22 109.4 98 55.1
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 2.3e-22 109.4 98 55.1
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 2.3e-22 109.4 98 55.1
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 2.3e-22 109.4 54 83.3
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 3.9e-22 108.6 101 59.4
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 6.7e-22 107.8 50 90.0
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 6.7e-22 107.8 102 52.9
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 8.8e-22 107.5 86 61.6
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.5e-21 106.7 53 84.9
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 2.0e-21 106.3 83 57.8
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 4.4e-21 105.1 103 55.3
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 4.4e-21 105.1 57 71.9
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 5.7e-21 104.8 102 50.0
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 7.4e-21 104.4 102 52.9
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 1.7e-20 103.2 67 64.2
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 1.7e-20 103.2 89 58.4
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 3.7e-20 102.1 55 72.7
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 4.8e-20 101.7 47 85.1
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 4.8e-20 101.7 55 72.7
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 8.2e-20 100.9 55 76.4
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 4.1e-19 98.6 63 69.8
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 4.1e-19 98.6 92 50.0
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 2.0e-18 96.3 73 57.5
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.3e-17 93.6 54 79.6
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 2.9e-17 92.4 46 80.4
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 1.1e-16 90.5 55 69.1
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 7.2e-16 87.8 49 67.3
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 1.1e-13 80.5 51 62.7


User provided reference genes

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