Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 1.9e-84 315.8 162 100.0
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 6.3e-56 221.1 161 72.0
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 5.9e-54 214.5 163 68.1
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.7e-53 213.0 163 65.6
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.2e-53 212.6 163 65.6
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.9e-53 212.2 163 65.0
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 1.4e-52 209.9 157 66.9
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 6.1e-51 204.5 162 67.9
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.0e-50 202.2 162 63.0
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 6.7e-50 201.1 165 64.2
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 6.7e-50 201.1 163 65.0
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 8.7e-50 200.7 155 67.1
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 3.3e-49 198.7 155 63.2
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 5.7e-49 198.0 162 64.2
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 3.7e-48 195.3 162 63.0
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 6.3e-48 194.5 162 62.3
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 8.2e-48 194.1 167 65.9
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 8.2e-48 194.1 162 63.0
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 1.1e-47 193.7 164 63.4
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 1.4e-47 193.4 163 62.0
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.8e-47 193.0 162 62.3
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.1e-47 192.2 161 63.4
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 3.1e-47 192.2 156 64.7
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 4.1e-47 191.8 165 63.0
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 6.9e-47 191.0 162 63.0
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 6.9e-47 191.0 161 61.5
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 1.2e-46 190.3 169 62.1
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 1.3e-45 186.8 169 60.4
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 2.2e-45 186.0 164 61.0
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 2.9e-45 185.7 156 61.5
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 6.5e-45 184.5 170 58.2
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 1.1e-44 183.7 156 63.5
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.5e-44 182.6 161 58.4
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.6e-43 179.9 151 64.2
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.6e-43 179.9 163 61.3
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 2.1e-43 179.5 171 58.5
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.7e-43 179.1 162 58.6
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 2.7e-43 179.1 161 57.1
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.6e-43 178.7 151 63.6
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 3.6e-43 178.7 157 59.9
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 1.0e-42 177.2 161 59.0
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 1.4e-42 176.8 162 58.6
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 1.4e-42 176.8 163 60.1
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 1.8e-42 176.4 162 58.6
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 1.8e-42 176.4 177 53.7
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 5.1e-42 174.9 161 58.4
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 6.7e-42 174.5 160 55.6
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 6.7e-42 174.5 158 59.5
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 1.5e-41 173.3 162 59.3
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 3.3e-41 172.2 148 58.8
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 4.3e-41 171.8 156 57.1
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 9.7e-41 170.6 174 57.5
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 1.3e-40 170.2 165 58.8
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.3e-40 170.2 160 58.1
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.3e-40 170.2 162 57.4
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.7e-40 169.9 159 56.6
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 1.7e-40 169.9 163 57.1
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 3.7e-40 168.7 147 57.8
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.1e-39 167.2 127 64.6
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 1.8e-39 166.4 165 57.0
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 4.1e-39 165.2 166 57.8
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.2e-38 163.7 159 56.0
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 1.2e-38 163.7 162 53.1
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.6e-38 162.5 159 57.9
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.4e-38 162.2 154 57.1
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 3.4e-38 162.2 154 57.1
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 4.5e-38 161.8 158 55.1
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 4.5e-38 161.8 158 57.6
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 4.5e-38 161.8 156 57.1
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 4.5e-38 161.8 161 54.7
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 4.5e-38 161.8 160 55.6
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 7.7e-38 161.0 154 57.1
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 7.7e-38 161.0 153 56.2
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.0e-37 160.6 154 56.5
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 1.7e-37 159.8 158 54.4
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 1.7e-37 159.8 190 51.1
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 3.8e-37 158.7 142 57.0
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 8.5e-37 157.5 164 50.6
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 8.5e-37 157.5 156 56.4
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 1.9e-36 156.4 142 59.2
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 5.5e-36 154.8 161 51.6
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 7.2e-36 154.5 157 54.8
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 2.1e-35 152.9 161 52.2
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 3.6e-35 152.1 158 53.2
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 4.7e-35 151.8 160 53.1
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 7.9e-35 151.0 149 55.0
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 7.9e-35 151.0 149 55.0
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 1.0e-34 150.6 160 51.2
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 1.8e-34 149.8 163 57.7
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 2.3e-34 149.4 163 56.4
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 8.8e-34 147.5 149 55.7
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 3.3e-33 145.6 148 54.7
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 4.4e-33 145.2 156 51.9
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 5.7e-33 144.8 149 55.7
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 5.7e-33 144.8 149 55.7
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 7.4e-33 144.4 144 55.6
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 7.4e-33 144.4 144 55.6
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 9.7e-33 144.1 159 52.8
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.3e-32 143.7 154 51.9
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 1.7e-32 143.3 157 52.2
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 3.7e-32 142.1 148 54.1
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 4.8e-32 141.7 148 54.1
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 8.2e-32 141.0 148 52.7
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 1.8e-31 139.8 150 52.0
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.4e-31 139.4 160 50.6
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 2.4e-31 139.4 158 51.9
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 3.1e-31 139.0 145 54.5
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.0e-30 136.3 157 51.6
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 2.6e-30 136.0 139 54.7
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 3.5e-30 135.6 150 52.0
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 3.5e-30 135.6 140 51.4
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 4.5e-30 135.2 150 48.7
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 4.5e-30 135.2 192 43.2
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 5.9e-30 134.8 162 50.6
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 7.7e-30 134.4 141 48.9
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 1.3e-29 133.7 158 50.6
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 1.7e-29 133.3 138 52.2
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 2.2e-29 132.9 139 54.7
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 3.8e-29 132.1 146 52.1
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 5.0e-29 131.7 142 51.4
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 6.5e-29 131.3 157 49.7
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 1.5e-28 130.2 170 43.5
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.5e-28 129.4 156 49.4
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 4.2e-28 128.6 162 50.6
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 7.2e-28 127.9 153 47.7
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 1.2e-27 127.1 157 45.2
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 4.7e-27 125.2 143 51.7
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 8.0e-27 124.4 142 51.4
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 8.0e-27 124.4 138 52.2
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 1.0e-26 124.0 157 44.6
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.3e-26 122.9 157 49.0
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 2.0e-25 119.8 143 50.3
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 7.5e-25 117.9 142 50.0
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 1.7e-24 116.7 126 50.8
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 3.7e-24 115.5 155 42.6
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 1.1e-23 114.0 129 49.6
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 7.0e-23 111.3 120 53.3
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 1.2e-22 110.5 144 46.5
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 1.7e-21 106.7 129 42.6
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 7.2e-20 101.3 108 51.9
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 8.0e-19 97.8 152 42.1
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.0e-18 97.4 152 42.1
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 1.8e-18 96.7 168 40.5
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 1.5e-17 93.6 89 55.1
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 1.5e-17 93.6 89 55.1
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.4e-17 92.4 152 42.1
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 4.4e-17 92.0 91 58.2
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 9.8e-17 90.9 173 40.5
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.7e-16 90.1 152 41.4
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.7e-16 90.1 152 41.4
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 4.8e-16 88.6 75 58.7
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 4.1e-15 85.5 78 53.8
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 2.7e-14 82.8 152 40.1
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 3.2e-12 75.9 158 36.1
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 1.2e-11 73.9 70 58.6
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 2.3e-10 69.7 81 49.4
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 3.0e-10 69.3 86 45.3
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 5.2e-10 68.6 80 46.2
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 2.6e-09 66.2 57 70.2
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 5.7e-09 65.1 82 47.6
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 1.3e-08 63.9 58 55.2
DCAR_023429 Daucus carota HOM05D057861 ORTHO05D004842 1.7e-08 63.5 136 29.4
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.7e-08 63.5 138 28.3
Ciclev10023033m.g Citrus clementina HOM05D004226 ORTHO05D004842 2.2e-08 63.2 59 61.0
RcHm_v2.0_Chr1g0337361 Rosa chinensis HOM05D020336 ORTHO05D022570 4.1e-07 58.9 131 30.5
FAN06G1571 Fragaria x ananassa HOM05D020336 ORTHO05D022570 5.4e-07 58.5 140 30.7
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 5.4e-07 58.5 47 55.3
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 7.0e-07 58.2 58 51.7
Ciclev10023098m.g Citrus clementina HOM05D004226 ORTHO05D004842 2.0e-06 56.6 48 60.4
Medtr8g011510 Medicago truncatula HOM05D004226 ORTHO05D004842 2.0e-06 56.6 125 34.4
Peaxi162Scf00462g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 2.7e-06 56.2 55 65.5
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.7e-06 56.2 52 53.8
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.7e-06 56.2 52 53.8


User provided reference genes

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